GCF_018292165.1_ASM1829216v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP072255.1

Region	Type	From	To
Region 1.1	resorcinol	1,019,082	1,060,224
Region 1.2	betalactone	1,199,572	1,222,329
Region 1.3	RRE-containing	2,767,975	2,785,907
Region 1.4	RRE-containing	4,767,860	4,788,126

Region	Type	From	To	Similarity
Region 1.1	resorcinol	1,019,082	1,060,224
Region 1.2	betalactone	1,199,572	1,222,329
Region 1.3	RRE-containing	2,767,975	2,785,907
Region 1.4	RRE-containing	4,767,860	4,788,126

No secondary metabolite regions were found in these records:: NZ_CP072256.1

Compact view

NZ_CP072255.1 - Region 1 - resorcinol

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Location: 1,019,082 - 1,060,224 nt. (total: 41,143 nt) Show pHMM detection rules used

resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001197.1	0.20	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0001525.1	0.16	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000667.1	0.16	Terpene	PR-toxin	Penicillium roqueforti FM164
BGC0000509.1	0.16	RiPP	epilancin 15x	Staphylococcus epidermidis
BGC0001928.1	0.14	Other	(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid	Streptomyces sp. MA37
BGC0000204.1	0.14	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0001156.1	0.14	Terpene	platencin	Streptomyces platensis
BGC0001140.1	0.14	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0000866.1	0.14	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001197.1	0.53	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0001525.1	0.47	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000667.1	0.46	Terpene	PR-toxin	Penicillium roqueforti FM164
BGC0000509.1	0.46	RiPP	epilancin 15x	Staphylococcus epidermidis
BGC0001928.1	0.44	Other	(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid	Streptomyces sp. MA37
BGC0000204.1	0.44	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0001156.1	0.44	Terpene	platencin	Streptomyces platensis
BGC0001140.1	0.44	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0000866.1	0.43	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP072255.1 - Region 2 - betalactone

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Location: 1,199,572 - 1,222,329 nt. (total: 22,758 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001411.1	0.25	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000720.1	0.25	Saccharide	tobramycin	Streptoalloteichus tenebrarius
BGC0000836.1	0.22	Other	APE Ec	Escherichia coli CFT073
BGC0002008.1	0.22	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000694.1	0.20	Saccharide	butirosin	Bacillus circulans
BGC0000246.1	0.19	Polyketide	mithramycin	Streptomyces argillaceus
BGC0000721.1	0.18	Saccharide	tobramycin	Streptoalloteichus tenebrarius
BGC0000760.1	0.18	Saccharide	emulsan	Acinetobacter venetianus RAG-1 = CIP 110063
BGC0001947.1	0.18	Saccharide	K53 capsular polysaccharide	Acinetobacter baumannii
BGC0000762.1	0.18	Saccharide	exopolysaccharide	Rhizobium leguminosarum bv. viciae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001411.1	0.59	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000720.1	0.58	Saccharide	tobramycin	Streptoalloteichus tenebrarius
BGC0000836.1	0.56	Other	APE Ec	Escherichia coli CFT073
BGC0002008.1	0.55	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000694.1	0.52	Saccharide	butirosin	Bacillus circulans
BGC0000246.1	0.52	Polyketide	mithramycin	Streptomyces argillaceus
BGC0000721.1	0.50	Saccharide	tobramycin	Streptoalloteichus tenebrarius
BGC0000760.1	0.50	Saccharide	emulsan	Acinetobacter venetianus RAG-1 = CIP 110063
BGC0001947.1	0.50	Saccharide	K53 capsular polysaccharide	Acinetobacter baumannii
BGC0000762.1	0.49	Saccharide	exopolysaccharide	Rhizobium leguminosarum bv. viciae

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP072255.1 - Region 3 - RRE-containing

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Location: 2,767,975 - 2,785,907 nt. (total: 17,933 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001588.1	0.17	Saccharide	exopolysaccharides	Burkholderia pseudomallei 1026b
BGC0001589.1	0.17	Saccharide	exopolysaccharides	Burkholderia cenocepacia J2315
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000899.1	0.15	Other	desosamine	Streptomyces narbonensis
BGC0000898.1	0.15	Saccharide	desosamine	Streptomyces venezuelae
BGC0001838.1	0.09	NRP	WLIP	Pseudomonas putida
BGC0000045.1	0.08	Polyketide	dehydrocurvularin	Aspergillus terreus
BGC0001657.1	0.08	NRP	lysocin	Lysobacter sp. RH2180-5
BGC0002025.1	0.06	NRP	thaxteramide C	Jahnella sp. MSr9139
BGC0001093.1	0.06	NRP, Polyketide	disorazol A	Sorangium cellulosum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001588.1	0.48	Saccharide	exopolysaccharides	Burkholderia pseudomallei 1026b
BGC0001589.1	0.48	Saccharide	exopolysaccharides	Burkholderia cenocepacia J2315
BGC0001120.1	0.47	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000899.1	0.45	Other	desosamine	Streptomyces narbonensis
BGC0000898.1	0.44	Saccharide	desosamine	Streptomyces venezuelae
BGC0001838.1	0.34	NRP	WLIP	Pseudomonas putida
BGC0000045.1	0.31	Polyketide	dehydrocurvularin	Aspergillus terreus
BGC0001657.1	0.30	NRP	lysocin	Lysobacter sp. RH2180-5
BGC0002025.1	0.26	NRP	thaxteramide C	Jahnella sp. MSr9139
BGC0001093.1	0.24	NRP, Polyketide	disorazol A	Sorangium cellulosum

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP072255.1 - Region 4 - RRE-containing

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Location: 4,767,860 - 4,788,126 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000486.1	0.16	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001120.1	0.14	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001356.1	0.14	RiPP	paeninodin	Paenibacillus dendritiformis C454
BGC0001138.1	0.14	Other (Nucleoside)	a201a	Marinactinospora thermotolerans
BGC0000768.1	0.14	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0002009.1	0.14	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0000584.1	0.14	RiPP	colicin V	Escherichia coli
BGC0000797.1	0.14	Saccharide	sphingan polysaccharide	Sphingomonas sp. S88
BGC0001765.1	0.14	Saccharide	salecan	Agrobacterium tumefaciens

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000486.1	0.47	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001120.1	0.44	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001356.1	0.43	RiPP	paeninodin	Paenibacillus dendritiformis C454
BGC0001138.1	0.43	Other (Nucleoside)	a201a	Marinactinospora thermotolerans
BGC0000768.1	0.43	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0002009.1	0.43	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0000584.1	0.43	RiPP	colicin V	Escherichia coli
BGC0000797.1	0.43	Saccharide	sphingan polysaccharide	Sphingomonas sp. S88
BGC0001765.1	0.43	Saccharide	salecan	Agrobacterium tumefaciens

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names