GCF_000701445.1_ASM70144v1_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_JNIX01000010 (original name was: NZ_JNIX01000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	lassopeptide	47,624	69,991

NZ_JNIX01000014 (original name was: NZ_JNIX01000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	resorcinol	121,797	151,100

NZ_JNIX01000015 (original name was: NZ_JNIX01000015.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	terpene	101,786	125,383	carotenoid	Terpene	50%

Region	Type	From	To	Most similar known cluster	Similarity
Region 10.1	lassopeptide	47,624	69,991
Region 13.1	resorcinol	121,797	151,100
Region 14.1	terpene	101,786	125,383	carotenoid	Terpene	50%

No secondary metabolite regions were found in these records:: NZ_JNIX01000001 (original name was: NZ_JNIX01000001.1); NZ_JNIX01000002 (original name was: NZ_JNIX01000002.1); NZ_JNIX01000003 (original name was: NZ_JNIX01000003.1); NZ_JNIX01000004 (original name was: NZ_JNIX01000004.1); NZ_JNIX01000005 (original name was: NZ_JNIX01000005.1); NZ_JNIX01000006 (original name was: NZ_JNIX01000006.1); NZ_JNIX01000007 (original name was: NZ_JNIX01000007.1); NZ_JNIX01000008 (original name was: NZ_JNIX01000008.1); NZ_JNIX01000009 (original name was: NZ_JNIX01000009.1); NZ_KL370782.1; NZ_JNIX01000013 (original name was: NZ_JNIX01000013.1); NZ_JNIX01000016 (original name was: NZ_JNIX01000016.1)

Compact view

c00010_NZ_JNIX.. - Region 1 - lassopeptide

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Location: 47,624 - 69,991 nt. (total: 22,368 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG comparison

KnownClusterBlast

Lasso peptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000580.1	0.32	RiPP	xanthomonin I, xanthomonin II	Xanthomonas gardneri ATCC 19865
BGC0000570.1	0.31	RiPP	astexin-1	Asticcacaulis excentricus CB 48
BGC0000574.1	0.26	RiPP	caulosegnin I, caulosegnin II, caulosegnin III	Caulobacter segnis ATCC 21756
BGC0000573.1	0.24	RiPP	caulonodin I, caulonodin II	Caulobacter sp. K31
BGC0000576.1	0.23	RiPP	rubrivinodin	Rubrivivax gelatinosus IL144
BGC0000577.1	0.21	RiPP	sphingonodin II	Sphingobium japonicum UT26S
BGC0001889.1	0.21	RiPP	fusilassin	Thermobifida fusca YX
BGC0001673.1	0.20	RiPP	moomysin	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0001786.1	0.18	RiPP	subterisin	Novosphingobium subterraneum
BGC0001539.1	0.18	RiPP	cattlecin	Streptomyces cattleya NRRL 8057 = DSM 46488

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000580.1	0.65	RiPP	xanthomonin I, xanthomonin II	Xanthomonas gardneri ATCC 19865
BGC0000570.1	0.65	RiPP	astexin-1	Asticcacaulis excentricus CB 48
BGC0000574.1	0.59	RiPP	caulosegnin I, caulosegnin II, caulosegnin III	Caulobacter segnis ATCC 21756
BGC0000573.1	0.58	RiPP	caulonodin I, caulonodin II	Caulobacter sp. K31
BGC0000576.1	0.56	RiPP	rubrivinodin	Rubrivivax gelatinosus IL144
BGC0000577.1	0.54	RiPP	sphingonodin II	Sphingobium japonicum UT26S
BGC0001889.1	0.53	RiPP	fusilassin	Thermobifida fusca YX
BGC0001673.1	0.52	RiPP	moomysin	Streptomyces cattleya NRRL 8057 = DSM 46488
BGC0001786.1	0.50	RiPP	subterisin	Novosphingobium subterraneum
BGC0001539.1	0.50	RiPP	cattlecin	Streptomyces cattleya NRRL 8057 = DSM 46488

Similar known gene clusters

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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Lasso peptides

Core peptide predictions

No core peptides found.

c00013_NZ_JNIX.. - Region 1 - resorcinol

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Location: 121,797 - 151,100 nt. (total: 29,304 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000703.1	0.20	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001526.1	0.19	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000792.1	0.17	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001839.1	0.16	Terpene	squalestatin S1	Aspergillus sp. Z5
BGC0001765.1	0.15	Saccharide	salecan	Agrobacterium tumefaciens
BGC0001380.1	0.15	Saccharide	salecan	Agrobacterium sp. ZX09
BGC0001525.1	0.15	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001521.1	0.14	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0000393.1	0.12	NRP, Polyketide	myxoprincomide-c506	Myxococcus xanthus DK 1622
BGC0002004.1	0.12	RiPP	methanobactin	Methylosinus trichosporium OB3b

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000703.1	0.52	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001526.1	0.50	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000792.1	0.47	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001839.1	0.47	Terpene	squalestatin S1	Aspergillus sp. Z5
BGC0001765.1	0.45	Saccharide	salecan	Agrobacterium tumefaciens
BGC0001380.1	0.45	Saccharide	salecan	Agrobacterium sp. ZX09
BGC0001525.1	0.45	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001521.1	0.44	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0000393.1	0.41	NRP, Polyketide	myxoprincomide-c506	Myxococcus xanthus DK 1622
BGC0002004.1	0.40	RiPP	methanobactin	Methylosinus trichosporium OB3b

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00014_NZ_JNIX.. - Region 1 - terpene

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Location: 101,786 - 125,383 nt. (total: 23,598 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000656.1	0.54	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000647.1	0.49	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000630.1	0.38	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000650.1	0.35	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000639.1	0.31	Terpene	carotenoid	Enterobacteriaceae bacterium DC260
BGC0000641.1	0.31	Terpene	carotenoid	Enterobacteriaceae bacterium DC416
BGC0000638.1	0.31	Terpene	carotenoid	Pantoea ananatis
BGC0000640.1	0.30	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000635.1	0.30	Terpene	carotenoid	Paracoccus sp. N81106
BGC0000664.1	0.25	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000656.1	0.81	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000647.1	0.78	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000630.1	0.70	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000650.1	0.68	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000639.1	0.65	Terpene	carotenoid	Enterobacteriaceae bacterium DC260
BGC0000641.1	0.65	Terpene	carotenoid	Enterobacteriaceae bacterium DC416
BGC0000638.1	0.64	Terpene	carotenoid	Pantoea ananatis
BGC0000640.1	0.64	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000635.1	0.63	Terpene	carotenoid	Paracoccus sp. N81106
BGC0000664.1	0.58	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names