GCF_000243215.1_Odor_lane_YIT_12061_V1_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_JH594596.1

Region	Type	From	To
Region 1.1	terpene	422,152	442,991
Region 1.2	lanthipeptide-class-i	1,194,447	1,218,757
Region 1.3	betalactone	2,640,280	2,670,108

Region	Type	From	To	Similarity
Region 1.1	terpene	422,152	442,991
Region 1.2	lanthipeptide-class-i	1,194,447	1,218,757
Region 1.3	betalactone	2,640,280	2,670,108

No secondary metabolite regions were found in these records:: NZ_JH594597.1; NZ_JH594598.1; NZ_JH594599.1; NZ_JH594600.1; NZ_JH594601.1; NZ_JH594602.1; NZ_JH594603.1; NZ_JH594604.1

Compact view

NZ_JH594596.1 - Region 1 - terpene

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Location: 422,152 - 442,991 nt. (total: 20,840 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.33	Terpene	carotenoid	Myxococcus xanthus
BGC0000645.1	0.28	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000650.1	0.24	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000637.1	0.23	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000644.1	0.21	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000634.1	0.19	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.19	Terpene	carotenoid	Brevundimonas vesicularis
BGC0001514.1	0.19	Other	aristeromycin	Streptomyces citricolor
BGC0000640.1	0.19	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.1	0.19	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.66	Terpene	carotenoid	Myxococcus xanthus
BGC0000645.1	0.61	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000650.1	0.57	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000637.1	0.56	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000644.1	0.53	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000634.1	0.52	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.52	Terpene	carotenoid	Brevundimonas vesicularis
BGC0001514.1	0.51	Other	aristeromycin	Streptomyces citricolor
BGC0000640.1	0.51	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.1	0.51	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_JH594596.1 - Region 2 - lanthipeptide-class-i

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Location: 1,194,447 - 1,218,757 nt. (total: 24,311 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Lanthipeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001289.1	0.27	RiPP	penisin	Paenibacillus ehimensis
BGC0000560.1	0.22	RiPP	subtilomycin	Bacillus subtilis
BGC0000542.1	0.21	RiPP	paenicidin B	Paenibacillus terrae
BGC0000541.1	0.21	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0001727.1	0.20	RiPP	paenilan	Paenibacillus polymyxa E681
BGC0000536.1	0.19	RiPP	nisin Q	Lactococcus lactis
BGC0000515.1	0.19	RiPP	geobacillin I	Geobacillus thermodenitrificans NG80-2
BGC0001789.1	0.19	RiPP	suicin 90-1330	Streptococcus suis
BGC0000537.1	0.19	RiPP	nisin U	Streptococcus uberis
BGC0000506.1	0.18	RiPP	entianin	Bacillus subtilis subsp. spizizenii

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001289.1	0.60	RiPP	penisin	Paenibacillus ehimensis
BGC0000560.1	0.55	RiPP	subtilomycin	Bacillus subtilis
BGC0000542.1	0.54	RiPP	paenicidin B	Paenibacillus terrae
BGC0000541.1	0.54	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0001727.1	0.52	RiPP	paenilan	Paenibacillus polymyxa E681
BGC0000536.1	0.51	RiPP	nisin Q	Lactococcus lactis
BGC0000515.1	0.51	RiPP	geobacillin I	Geobacillus thermodenitrificans NG80-2
BGC0001789.1	0.51	RiPP	suicin 90-1330	Streptococcus suis
BGC0000537.1	0.51	RiPP	nisin U	Streptococcus uberis
BGC0000506.1	0.50	RiPP	entianin	Bacillus subtilis subsp. spizizenii

Similar known gene clusters

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

Lanthipeptides

Core peptide predictions

No core peptides found.

NZ_JH594596.1 - Region 3 - betalactone

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Location: 2,640,280 - 2,670,108 nt. (total: 29,829 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001514.1	0.18	Other	aristeromycin	Streptomyces citricolor
BGC0001475.1	0.16	Polyketide	aspterric acid	Aspergillus terreus NIH2624
BGC0000666.1	0.15	Terpene	xiamycin A	Streptomyces sp. SCSIO 02999
BGC0000665.1	0.15	Terpene, Alkaloid	xiamycin	Streptomyces sp. HKI0576
BGC0001156.1	0.15	Terpene	platencin	Streptomyces platensis
BGC0001140.1	0.15	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0001928.1	0.15	Other	(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid	Streptomyces sp. MA37
BGC0001641.1	0.14	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001664.1	0.14	Terpene	merosterol	Scytonema sp. PCC 10023
BGC0000805.1	0.13	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001514.1	0.50	Other	aristeromycin	Streptomyces citricolor
BGC0001475.1	0.47	Polyketide	aspterric acid	Aspergillus terreus NIH2624
BGC0000666.1	0.45	Terpene	xiamycin A	Streptomyces sp. SCSIO 02999
BGC0000665.1	0.45	Terpene, Alkaloid	xiamycin	Streptomyces sp. HKI0576
BGC0001156.1	0.45	Terpene	platencin	Streptomyces platensis
BGC0001140.1	0.45	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0001928.1	0.45	Other	(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid	Streptomyces sp. MA37
BGC0001641.1	0.43	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001664.1	0.43	Terpene	merosterol	Scytonema sp. PCC 10023
BGC0000805.1	0.42	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names