GCF_014054965.1_ASM1405496v1_genomic - 7 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP059567.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	arylpolyene,resorcinol	513,163	559,604
Region 2	arylpolyene	836,591	875,409	APE Vf	Other	10%
Region 3	betalactone	1,268,284	1,295,772	mycosubtilin	NRP + Polyketide	20%
Region 4	arylpolyene	1,422,406	1,463,614
Region 5	terpene	1,488,641	1,509,028
Region 6	terpene	1,668,391	1,689,206
Region 7	RiPP-like	2,412,551	2,419,744

NZ_CP059567.1 - Region 1 - arylpolyene,resorcinol

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Location: 513,163 - 559,604 nt. (total: 46,442 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)
resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000880.1	0.36	Other (Nucleoside)	tunicamycin B1	Streptomyces chartreusis NRRL 3882
BGC0000896.1	0.35	Other	cycloserine	Streptomyces lavendulae subsp. lavendulae
BGC0001618.1	0.33	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0001927.1	0.32	Other	A-94964	Streptomyces sp.
BGC0001526.1	0.32	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000756.1	0.32	Saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0001222.1	0.32	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.32	RiPP	gassericin A	Lactobacillus gasseri
BGC0000486.1	0.32	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000602.1	0.31	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000880.1	0.49	Other (Nucleoside)	tunicamycin B1	Streptomyces chartreusis NRRL 3882
BGC0000896.1	0.49	Other	cycloserine	Streptomyces lavendulae subsp. lavendulae
BGC0001618.1	0.47	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0001927.1	0.47	Other	A-94964	Streptomyces sp.
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000756.1	0.47	Saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0001222.1	0.47	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.47	RiPP	gassericin A	Lactobacillus gasseri
BGC0000486.1	0.46	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000602.1	0.46	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP059567.1 - Region 2 - arylpolyene

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Location: 836,591 - 875,409 nt. (total: 38,819 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000228.1	0.21	Polyketide	granaticin	Streptomyces violaceoruber
BGC0000234.1	0.21	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001723.1	0.19	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000867.1	0.18	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0002000.1	0.17	Polyketide	setomimycin	Streptomyces aurantiacus JA 4570
BGC0002008.1	0.17	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836.1	0.17	Other	APE Ec	Escherichia coli CFT073
BGC0000768.1	0.17	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0001177.1	0.17	Polyketide	mensacaricin	Streptomyces bottropensis
BGC0000596.1	0.16	RiPP	SLI-2138	Streptomyces lividans TK24

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000228.1	0.53	Polyketide	granaticin	Streptomyces violaceoruber
BGC0000234.1	0.53	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001723.1	0.51	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000867.1	0.50	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0002000.1	0.49	Polyketide	setomimycin	Streptomyces aurantiacus JA 4570
BGC0002008.1	0.48	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836.1	0.48	Other	APE Ec	Escherichia coli CFT073
BGC0000768.1	0.48	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0001177.1	0.48	Polyketide	mensacaricin	Streptomyces bottropensis
BGC0000596.1	0.47	RiPP	SLI-2138	Streptomyces lividans TK24

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP059567.1 - Region 3 - betalactone

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Location: 1,268,284 - 1,295,772 nt. (total: 27,489 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001808.1	0.25	Other	toyocamycin	Streptomyces diastatochromogenes
BGC0000881.1	0.25	Other	toyocamycin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0000234.1	0.21	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001120.1	0.21	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000879.1	0.21	Other	toyocamycin, sangivamycin	Streptomyces rimosus
BGC0000258.1	0.20	Polyketide	prodigiosin	Serratia sp.
BGC0000649.1	0.20	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000259.1	0.18	Polyketide	prodigiosin	Serratia marcescens
BGC0000874.1	0.17	Other	blasticidin S	Streptomyces griseochromogenes
BGC0000782.1	0.17	Saccharide	O-antigen	Burkholderia pseudomallei 1026b

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001808.1	0.59	Other	toyocamycin	Streptomyces diastatochromogenes
BGC0000881.1	0.59	Other	toyocamycin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0000234.1	0.54	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001120.1	0.54	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000879.1	0.53	Other	toyocamycin, sangivamycin	Streptomyces rimosus
BGC0000258.1	0.53	Polyketide	prodigiosin	Serratia sp.
BGC0000649.1	0.53	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000259.1	0.50	Polyketide	prodigiosin	Serratia marcescens
BGC0000874.1	0.49	Other	blasticidin S	Streptomyces griseochromogenes
BGC0000782.1	0.48	Saccharide	O-antigen	Burkholderia pseudomallei 1026b

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP059567.1 - Region 4 - arylpolyene

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Location: 1,422,406 - 1,463,614 nt. (total: 41,209 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000255.1	0.19	Polyketide	pederin	Uncultured bacterium
BGC0001366.1	0.17	Polyketide	BE-24566B, zunyimycin A	Streptomyces sp. FJS31-2
BGC0000810.1	0.16	Alkaloid	benzoxazinone DIMBOA	Zea mays
BGC0001465.1	0.16	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0001687.1	0.15	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0000668.1	0.15	Terpene, Alkaloid	12-epi-hapalindole C isonitrile, 12-epi-hapalindole E, 12-epi-fischerindole U isonitrile, fischerindole L, 12-epi-fischerindole I isonitrile, welwitindolinone A isonitrile, welwitindolinone B isothiocyanate, welwitindolinone C isothiocyanate, N-methylwelwitindolinone C isothiocyanate, N-methylwelwitinsolinone C isonitrile, 3-epi-welwitindolinone B isothiocyanate, 3-(Z-2'-isocyanoethenyl)-indole	Hapalosiphon welwitschii UTEX B 1830
BGC0001594.1	0.15	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000840.1	0.15	Other	xanthomonadin I	Xanthomonas oryzae pv. oryzae
BGC0001534.1	0.15	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0002008.1	0.14	Other	aryl polyenes	Xenorhabdus doucetiae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000255.1	0.51	Polyketide	pederin	Uncultured bacterium
BGC0001366.1	0.48	Polyketide	BE-24566B, zunyimycin A	Streptomyces sp. FJS31-2
BGC0000810.1	0.47	Alkaloid	benzoxazinone DIMBOA	Zea mays
BGC0001465.1	0.46	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0001687.1	0.46	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0000668.1	0.46	Terpene, Alkaloid	12-epi-hapalindole C isonitrile, 12-epi-hapalindole E, 12-epi-fischerindole U isonitrile, fischerindole L, 12-epi-fischerindole I isonitrile, welwitindolinone A isonitrile, welwitindolinone B isothiocyanate, welwitindolinone C isothiocyanate, N-methylwelwitindolinone C isothiocyanate, N-methylwelwitinsolinone C isonitrile, 3-epi-welwitindolinone B isothiocyanate, 3-(Z-2'-isocyanoethenyl)-indole	Hapalosiphon welwitschii UTEX B 1830
BGC0001594.1	0.45	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000840.1	0.45	Other	xanthomonadin I	Xanthomonas oryzae pv. oryzae
BGC0001534.1	0.44	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0002008.1	0.44	Other	aryl polyenes	Xenorhabdus doucetiae

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP059567.1 - Region 5 - terpene

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Location: 1,488,641 - 1,509,028 nt. (total: 20,388 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.32	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000630.1	0.21	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.21	Terpene	β-carotein	uncultured bacterium
BGC0000664.1	0.21	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1	0.20	Terpene	carotenoid	Streptomyces avermitilis
BGC0000640.1	0.20	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0001456.1	0.19	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000656.1	0.19	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000638.1	0.19	Terpene	carotenoid	Pantoea ananatis
BGC0000642.1	0.19	Terpene	carotenoid	Enterobacteriaceae bacterium DC413

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.65	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000630.1	0.54	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.54	Terpene	β-carotein	uncultured bacterium
BGC0000664.1	0.53	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1	0.53	Terpene	carotenoid	Streptomyces avermitilis
BGC0000640.1	0.52	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0001456.1	0.51	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000656.1	0.51	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000638.1	0.50	Terpene	carotenoid	Pantoea ananatis
BGC0000642.1	0.50	Terpene	carotenoid	Enterobacteriaceae bacterium DC413

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP059567.1 - Region 6 - terpene

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Location: 1,668,391 - 1,689,206 nt. (total: 20,816 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.33	Terpene	carotenoid	Myxococcus xanthus
BGC0001456.1	0.21	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000633.1	0.21	Terpene	carotenoid	Streptomyces avermitilis
BGC0001227.1	0.20	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000664.1	0.20	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000751.1	0.19	Saccharide	capsular polysaccharide	Actinobacillus pleuropneumoniae
BGC0000649.1	0.18	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001903.1	0.15	Other	neocarazostatin A	Streptomyces sp. MA37
BGC0001897.1	0.14	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000943.1	0.12	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.66	Terpene	carotenoid	Myxococcus xanthus
BGC0001456.1	0.54	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000633.1	0.53	Terpene	carotenoid	Streptomyces avermitilis
BGC0001227.1	0.53	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000664.1	0.52	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000751.1	0.52	Saccharide	capsular polysaccharide	Actinobacillus pleuropneumoniae
BGC0000649.1	0.50	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001903.1	0.44	Other	neocarazostatin A	Streptomyces sp. MA37
BGC0001897.1	0.43	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000943.1	0.40	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP059567.1 - Region 7 - RiPP-like

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Location: 2,412,551 - 2,419,744 nt. (total: 7,194 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

No matches found.

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names