GCF_001584615.1_ASM158461v1_genomic - 2 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_LQQC01000007 (original name was: NZ_LQQC01000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	ectoine	61,383	71,757

NZ_LQQC01000014 (original name was: NZ_LQQC01000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	terpene	1	15,824	carotenoid	Terpene	33%

Region	Type	From	To	Most similar known cluster	Similarity
Region 7.1	ectoine	61,383	71,757
Region 14.1	terpene	1	15,824	carotenoid	Terpene	33%

No secondary metabolite regions were found in these records:: NZ_LQQC01000001 (original name was: NZ_LQQC01000001.1); NZ_LQQC01000002 (original name was: NZ_LQQC01000002.1); NZ_LQQC01000003 (original name was: NZ_LQQC01000003.1); NZ_LQQC01000004 (original name was: NZ_LQQC01000004.1); NZ_LQQC01000005 (original name was: NZ_LQQC01000005.1); NZ_LQQC01000006 (original name was: NZ_LQQC01000006.1); NZ_LQQC01000008 (original name was: NZ_LQQC01000008.1); NZ_LQQC01000009 (original name was: NZ_LQQC01000009.1); NZ_LQQC01000010 (original name was: NZ_LQQC01000010.1); NZ_LQQC01000011 (original name was: NZ_LQQC01000011.1); NZ_LQQC01000012 (original name was: NZ_LQQC01000012.1); NZ_LQQC01000013 (original name was: NZ_LQQC01000013.1)

Compact view

c00007_NZ_LQQC.. - Region 1 - ectoine

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Location: 61,383 - 71,757 nt. (total: 10,375 nt) Show pHMM detection rules used

ectoine: ectoine_synt

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000855.1	0.18	Other	ectoine	Methylomicrobium kenyense
BGC0000859.1	0.18	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000857.1	0.15	Other	ectoine	Methylophaga alcalica
BGC0000854.1	0.15	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0001778.1	0.08	Other	showdomycin	Streptomyces showdoensis
BGC0001591.1	0.03	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.03	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000855.1	0.49	Other	ectoine	Methylomicrobium kenyense
BGC0000859.1	0.49	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000857.1	0.45	Other	ectoine	Methylophaga alcalica
BGC0000854.1	0.45	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0001778.1	0.31	Other	showdomycin	Streptomyces showdoensis
BGC0001591.1	0.16	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.16	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00014_NZ_LQQC.. - Region 1 - terpene

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Location: 1 - 15,824 nt. (total: 15,824 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.33	Terpene	carotenoid	Myxococcus xanthus
BGC0000637.1	0.25	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000644.1	0.23	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000650.1	0.22	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000664.1	0.20	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000640.1	0.19	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0001227.1	0.18	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.1	0.16	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000649.1	0.15	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000636.1	0.14	Terpene	carotenoid	Brevibacterium linens

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.66	Terpene	carotenoid	Myxococcus xanthus
BGC0000637.1	0.59	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000644.1	0.56	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000650.1	0.55	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000664.1	0.53	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000640.1	0.51	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0001227.1	0.50	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.1	0.46	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000649.1	0.45	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000636.1	0.44	Terpene	carotenoid	Brevibacterium linens

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names