GCF_902373805.1_MGYG-HGUT-01319_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00004_NZ_CABK.. (original name was: NZ_CABKNR010000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	cyclic-lactone-autoinducer	19,948	40,511

c00006_NZ_CABK.. (original name was: NZ_CABKNR010000011.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	cyclic-lactone-autoinducer	7,572	31,420

c00008_NZ_CABK.. (original name was: NZ_CABKNR010000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	ranthipeptide	61,064	82,707
Region 8.2	cyclic-lactone-autoinducer	201,080	221,874

Region	Type	From	To	Similarity
Region 4.1	cyclic-lactone-autoinducer	19,948	40,511
Region 6.1	cyclic-lactone-autoinducer	7,572	31,420
Region 8.1	ranthipeptide	61,064	82,707
Region 8.2	cyclic-lactone-autoinducer	201,080	221,874

No secondary metabolite regions were found in these records:: c00001_NZ_CABK.. (original name was: NZ_CABKNR010000004.1); c00002_NZ_CABK.. (original name was: NZ_CABKNR010000007.1); c00003_NZ_CABK.. (original name was: NZ_CABKNR010000008.1); c00005_NZ_CABK.. (original name was: NZ_CABKNR010000010.1); c00007_NZ_CABK.. (original name was: NZ_CABKNR010000012.1); c00009_NZ_CABK.. (original name was: NZ_CABKNR010000014.1); c00010_NZ_CABK.. (original name was: NZ_CABKNR010000015.1); c00011_NZ_CABK.. (original name was: NZ_CABKNR010000016.1); c00012_NZ_CABK.. (original name was: NZ_CABKNR010000018.1); c00013_NZ_CABK.. (original name was: NZ_CABKNR010000019.1); c00014_NZ_CABK.. (original name was: NZ_CABKNR010000021.1); c00015_NZ_CABK.. (original name was: NZ_CABKNR010000022.1); c00016_NZ_CABK.. (original name was: NZ_CABKNR010000023.1); c00017_NZ_CABK.. (original name was: NZ_CABKNR010000024.1); c00018_NZ_CABK.. (original name was: NZ_CABKNR010000027.1); c00019_NZ_CABK.. (original name was: NZ_CABKNR010000029.1); c00020_NZ_CABK.. (original name was: NZ_CABKNR010000030.1); c00021_NZ_CABK.. (original name was: NZ_CABKNR010000031.1)

Compact view

c00004_NZ_CABK.. - Region 1 - cyclic-lactone-autoinducer

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Location: 19,948 - 40,511 nt. (total: 20,564 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002031.1	0.18	Alkaloid	kitasetaline	Kitasatospora setae KM-6054
BGC0001914.1	0.17	Other	benzastatin J, 7-hydroxyl benzastatin B, 7-hydroxyl O-demethylbenzastatin A, JBIR-67, 7-hydroxyl benzastatin F, 7-hydroxyl O-demethylbenzastatin D, O-demethylvirantmycin, 7-hydroxyl benzastatin D, virantmycin, benzastatin K, methylbenzastatin K	Streptomyces sp. RI18
BGC0001529.1	0.17	Alkaloid	bezastatin derivates	Streptomyces sp. RI18
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001618.1	0.16	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0000616.1	0.15	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000522.1	0.15	RiPP	lacticin Z	Lactococcus lactis
BGC0000560.1	0.15	RiPP	subtilomycin	Bacillus subtilis
BGC0000620.1	0.15	RiPP	lacticin Q	Lactococcus lactis
BGC0001684.1	0.15	Other	N-acyloxyacyl glutamine	Klebsiella variicola

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002031.1	0.49	Alkaloid	kitasetaline	Kitasatospora setae KM-6054
BGC0001914.1	0.48	Other	benzastatin J, 7-hydroxyl benzastatin B, 7-hydroxyl O-demethylbenzastatin A, JBIR-67, 7-hydroxyl benzastatin F, 7-hydroxyl O-demethylbenzastatin D, O-demethylvirantmycin, 7-hydroxyl benzastatin D, virantmycin, benzastatin K, methylbenzastatin K	Streptomyces sp. RI18
BGC0001529.1	0.48	Alkaloid	bezastatin derivates	Streptomyces sp. RI18
BGC0001551.1	0.46	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001618.1	0.46	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0000616.1	0.46	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000522.1	0.45	RiPP	lacticin Z	Lactococcus lactis
BGC0000560.1	0.45	RiPP	subtilomycin	Bacillus subtilis
BGC0000620.1	0.45	RiPP	lacticin Q	Lactococcus lactis
BGC0001684.1	0.45	Other	N-acyloxyacyl glutamine	Klebsiella variicola

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00006_NZ_CABK.. - Region 1 - cyclic-lactone-autoinducer

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Location: 7,572 - 31,420 nt. (total: 23,849 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000758.1	0.13	Saccharide	capsular polysaccharide	Staphylococcus aureus
BGC0000624.1	0.12	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001751.1	0.04	NRP, Polyketide	pyxipyrrolone A, pyxipyrrolone B	Pyxidicoccus sp. MCy9557
BGC0001728.1	0.04	NRP, Polyketide	paenilipoheptin	Paenibacillus polymyxa E681
BGC0000268.1	0.04	Polyketide	Sch-47554, Sch-47555	Streptomyces sp. SCC 2136

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000758.1	0.42	Saccharide	capsular polysaccharide	Staphylococcus aureus
BGC0000624.1	0.39	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001751.1	0.19	NRP, Polyketide	pyxipyrrolone A, pyxipyrrolone B	Pyxidicoccus sp. MCy9557
BGC0001728.1	0.19	NRP, Polyketide	paenilipoheptin	Paenibacillus polymyxa E681
BGC0000268.1	0.17	Polyketide	Sch-47554, Sch-47555	Streptomyces sp. SCC 2136

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00008_NZ_CABK.. - Region 1 - ranthipeptide

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Location: 61,064 - 82,707 nt. (total: 21,644 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000602.1	0.19	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001387.1	0.17	Other	nucleocidin	Streptomyces calvus
BGC0000486.1	0.16	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001229.1	0.15	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0001222.1	0.15	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.15	RiPP	gassericin A	Lactobacillus gasseri
BGC0001639.1	0.15	RiPP	klebsidin	Klebsiella pneumoniae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000602.1	0.51	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001387.1	0.48	Other	nucleocidin	Streptomyces calvus
BGC0000486.1	0.46	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000500.1	0.46	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000616.1	0.46	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001229.1	0.46	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0001222.1	0.46	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.46	RiPP	gassericin A	Lactobacillus gasseri
BGC0001639.1	0.45	RiPP	klebsidin	Klebsiella pneumoniae

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00008_NZ_CABK.. - Region 2 - cyclic-lactone-autoinducer

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Location: 201,080 - 221,874 nt. (total: 20,795 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.21	RiPP	circularin A	Clostridium beijerinckii
BGC0000539.1	0.18	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000521.1	0.17	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0000504.1	0.17	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000543.1	0.16	RiPP	pep5	Staphylococcus epidermidis
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000548.1	0.16	RiPP	salivaricin A	Streptococcus salivarius
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000489.1	0.16	RiPP	enterocin AS-48	Enterococcus faecalis
BGC0000552.1	0.16	RiPP	SmbA, SmbB	Streptococcus mutans

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.54	RiPP	circularin A	Clostridium beijerinckii
BGC0000539.1	0.49	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000521.1	0.48	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0000504.1	0.48	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000543.1	0.47	RiPP	pep5	Staphylococcus epidermidis
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000548.1	0.47	RiPP	salivaricin A	Streptococcus salivarius
BGC0000500.1	0.46	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000489.1	0.46	RiPP	enterocin AS-48	Enterococcus faecalis
BGC0000552.1	0.46	RiPP	SmbA, SmbB	Streptococcus mutans

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names