GCF_001516895.1_ASM151689v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_LDYG01000003 (original name was: NZ_LDYG01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	terpene	38,269	60,131

NZ_LDYG01000020 (original name was: NZ_LDYG01000020.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	terpene	46,377	67,213	carotenoid	Terpene	50%

NZ_LDYG01000028 (original name was: NZ_LDYG01000028.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	T3PKS	160,326	201,396

NZ_LDYG01000030 (original name was: NZ_LDYG01000030.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	siderophore	8,054	21,054

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	terpene	38,269	60,131
Region 20.1	terpene	46,377	67,213	carotenoid	Terpene	50%
Region 28.1	T3PKS	160,326	201,396
Region 30.1	siderophore	8,054	21,054

No secondary metabolite regions were found in these records:: NZ_LDYG01000001 (original name was: NZ_LDYG01000001.1); NZ_LDYG01000002 (original name was: NZ_LDYG01000002.1); NZ_LDYG01000004 (original name was: NZ_LDYG01000004.1); NZ_LDYG01000005 (original name was: NZ_LDYG01000005.1); NZ_LDYG01000006 (original name was: NZ_LDYG01000006.1); NZ_LDYG01000007 (original name was: NZ_LDYG01000007.1); NZ_LDYG01000008 (original name was: NZ_LDYG01000008.1); NZ_LDYG01000009 (original name was: NZ_LDYG01000009.1); NZ_LDYG01000010 (original name was: NZ_LDYG01000010.1); NZ_LDYG01000011 (original name was: NZ_LDYG01000011.1); NZ_LDYG01000012 (original name was: NZ_LDYG01000012.1); NZ_LDYG01000013 (original name was: NZ_LDYG01000013.1); NZ_LDYG01000014 (original name was: NZ_LDYG01000014.1); NZ_LDYG01000015 (original name was: NZ_LDYG01000015.1); NZ_LDYG01000016 (original name was: NZ_LDYG01000016.1); NZ_LDYG01000017 (original name was: NZ_LDYG01000017.1); NZ_LDYG01000018 (original name was: NZ_LDYG01000018.1); NZ_LDYG01000019 (original name was: NZ_LDYG01000019.1); NZ_LDYG01000021 (original name was: NZ_LDYG01000021.1); NZ_LDYG01000022 (original name was: NZ_LDYG01000022.1); NZ_LDYG01000023 (original name was: NZ_LDYG01000023.1); NZ_LDYG01000024 (original name was: NZ_LDYG01000024.1); NZ_LDYG01000025 (original name was: NZ_LDYG01000025.1); NZ_LDYG01000026 (original name was: NZ_LDYG01000026.1); NZ_LDYG01000027 (original name was: NZ_LDYG01000027.1); NZ_LDYG01000029 (original name was: NZ_LDYG01000029.1); NZ_LDYG01000031 (original name was: NZ_LDYG01000031.1); NZ_LDYG01000032 (original name was: NZ_LDYG01000032.1); NZ_LDYG01000033 (original name was: NZ_LDYG01000033.1); NZ_LDYG01000034 (original name was: NZ_LDYG01000034.1); NZ_LDYG01000035 (original name was: NZ_LDYG01000035.1); NZ_LDYG01000036 (original name was: NZ_LDYG01000036.1); NZ_LDYG01000037 (original name was: NZ_LDYG01000037.1); NZ_LDYG01000038 (original name was: NZ_LDYG01000038.1); NZ_LDYG01000039 (original name was: NZ_LDYG01000039.1); NZ_LDYG01000040 (original name was: NZ_LDYG01000040.1); NZ_LDYG01000041 (original name was: NZ_LDYG01000041.1); NZ_LDYG01000042 (original name was: NZ_LDYG01000042.1); NZ_LDYG01000043 (original name was: NZ_LDYG01000043.1); NZ_LDYG01000044 (original name was: NZ_LDYG01000044.1); NZ_LDYG01000045 (original name was: NZ_LDYG01000045.1); NZ_LDYG01000046 (original name was: NZ_LDYG01000046.1); NZ_LDYG01000047 (original name was: NZ_LDYG01000047.1); NZ_LDYG01000048 (original name was: NZ_LDYG01000048.1); NZ_LDYG01000049 (original name was: NZ_LDYG01000049.1); NZ_LDYG01000050 (original name was: NZ_LDYG01000050.1); NZ_LDYG01000051 (original name was: NZ_LDYG01000051.1); NZ_LDYG01000052 (original name was: NZ_LDYG01000052.1); NZ_LDYG01000053 (original name was: NZ_LDYG01000053.1); NZ_LDYG01000054 (original name was: NZ_LDYG01000054.1); NZ_LDYG01000055 (original name was: NZ_LDYG01000055.1); NZ_LDYG01000056 (original name was: NZ_LDYG01000056.1); NZ_LDYG01000057 (original name was: NZ_LDYG01000057.1); NZ_LDYG01000058 (original name was: NZ_LDYG01000058.1); NZ_LDYG01000059 (original name was: NZ_LDYG01000059.1)

Compact view

c00003_NZ_LDYG.. - Region 1 - terpene

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Location: 38,269 - 60,131 nt. (total: 21,863 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000663.1	0.13	Terpene	hopene	Streptomyces coelicolor A3(2)
BGC0001733.1	0.13	RiPP	PcpA	Pleurocapsa sp. PCC 7327
BGC0000670.1	0.13	Terpene	thalianol, thaliandiol	Arabidopsis thaliana
BGC0000914.1	0.08	Other	methylenomycin A	Streptomyces coelicolor A3(2)
BGC0000367.1	0.07	NRP	gramicidin	Brevibacillus brevis NBRC 100599
BGC0001005.1	0.06	NRP, Polyketide	locillomycin	Bacillus subtilis
BGC0001946.1	0.06	NRP, Polyketide	lagriamide	Burkholderia gladioli
BGC0001646.1	0.06	Polyketide	lagriamide	Burkholderia gladioli
BGC0001207.1	0.06	NRP	teixobactin	Eleftheria terrae
BGC0000329.1	0.05	NRP	corpeptin A, corpeptin B	Pseudomonas corrugata

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000663.1	0.42	Terpene	hopene	Streptomyces coelicolor A3(2)
BGC0001733.1	0.42	RiPP	PcpA	Pleurocapsa sp. PCC 7327
BGC0000670.1	0.41	Terpene	thalianol, thaliandiol	Arabidopsis thaliana
BGC0000914.1	0.32	Other	methylenomycin A	Streptomyces coelicolor A3(2)
BGC0000367.1	0.27	NRP	gramicidin	Brevibacillus brevis NBRC 100599
BGC0001005.1	0.26	NRP, Polyketide	locillomycin	Bacillus subtilis
BGC0001946.1	0.25	NRP, Polyketide	lagriamide	Burkholderia gladioli
BGC0001646.1	0.25	Polyketide	lagriamide	Burkholderia gladioli
BGC0001207.1	0.24	NRP	teixobactin	Eleftheria terrae
BGC0000329.1	0.23	NRP	corpeptin A, corpeptin B	Pseudomonas corrugata

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00020_NZ_LDYG.. - Region 1 - terpene

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Location: 46,377 - 67,213 nt. (total: 20,837 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.36	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000645.1	0.27	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000846.1	0.27	Other	tabtoxin	Pseudomonas syringae
BGC0000885.1	0.24	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0000648.1	0.24	Terpene	carotenoid	Myxococcus xanthus
BGC0000633.1	0.21	Terpene	carotenoid	Streptomyces avermitilis
BGC0000937.1	0.21	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0001227.1	0.21	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000634.1	0.21	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.21	Terpene	carotenoid	Brevundimonas vesicularis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.69	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000645.1	0.61	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000846.1	0.61	Other	tabtoxin	Pseudomonas syringae
BGC0000885.1	0.57	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0000648.1	0.57	Terpene	carotenoid	Myxococcus xanthus
BGC0000633.1	0.54	Terpene	carotenoid	Streptomyces avermitilis
BGC0000937.1	0.54	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0001227.1	0.53	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000634.1	0.53	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.53	Terpene	carotenoid	Brevundimonas vesicularis

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00028_NZ_LDYG.. - Region 1 - T3PKS

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Location: 160,326 - 201,396 nt. (total: 41,071 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000282.1	0.25	Polyketide	alkylresorcinol	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001962.1	0.23	Polyketide	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0000902.1	0.20	Other	flaviolin	Saccharopolyspora erythraea NRRL 2338
BGC0000285.1	0.20	Polyketide, Saccharide	flaviolin rhamnoside, 3,3'-diflaviolin, flaviolin	Saccharopolyspora erythraea
BGC0001310.1	0.20	Terpene	naringenin	Streptomyces clavuligerus ATCC 27064
BGC0001831.1	0.17	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0001525.1	0.16	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000487.1	0.16	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000545.1	0.16	RiPP	ruminococcin A	[Ruminococcus] gnavus E1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000282.1	0.58	Polyketide	alkylresorcinol	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001962.1	0.56	Polyketide	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0000902.1	0.53	Other	flaviolin	Saccharopolyspora erythraea NRRL 2338
BGC0000285.1	0.53	Polyketide, Saccharide	flaviolin rhamnoside, 3,3'-diflaviolin, flaviolin	Saccharopolyspora erythraea
BGC0001310.1	0.52	Terpene	naringenin	Streptomyces clavuligerus ATCC 27064
BGC0001831.1	0.49	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0001525.1	0.47	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000487.1	0.47	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000545.1	0.46	RiPP	ruminococcin A	[Ruminococcus] gnavus E1

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00030_NZ_LDYG.. - Region 1 - siderophore

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Location: 8,054 - 21,054 nt. (total: 13,001 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000942.1	0.49	Other	petrobactin	Bacillus anthracis str. Ames
BGC0000791.1	0.25	Saccharide	O-antigen	Cronobacter sakazakii
BGC0000730.1	0.25	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000731.1	0.25	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000733.1	0.25	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000732.1	0.25	Saccharide	capsular polysaccharide	Raoultella planticola
BGC0000728.1	0.25	Saccharide	capsular polysaccharide	Klebsiella pneumoniae subsp. ozaenae
BGC0000729.1	0.25	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000788.1	0.25	Saccharide	O-antigen	Salmonella enterica subsp. salamae serovar Greenside
BGC0000805.1	0.13	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000942.1	0.78	Other	petrobactin	Bacillus anthracis str. Ames
BGC0000791.1	0.59	Saccharide	O-antigen	Cronobacter sakazakii
BGC0000730.1	0.59	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000731.1	0.59	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000733.1	0.58	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000732.1	0.58	Saccharide	capsular polysaccharide	Raoultella planticola
BGC0000728.1	0.58	Saccharide	capsular polysaccharide	Klebsiella pneumoniae subsp. ozaenae
BGC0000729.1	0.58	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000788.1	0.58	Saccharide	O-antigen	Salmonella enterica subsp. salamae serovar Greenside
BGC0000805.1	0.42	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names