GCF_015476275.1_ASM1547627v1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP064354.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	arylpolyene	589,898	633,496	APE Vf	Other	40%
Region 1.2	betalactone	1,831,720	1,854,947	fengycin	NRP	20%
Region 1.3	siderophore	2,408,699	2,423,364	xanthoferrin	Other	100%
Region 1.4	NAGGN	3,537,092	3,551,824
Region 1.5	redox-cofactor	4,831,920	4,854,082	lankacidin C	NRP + Polyketide	13%

No secondary metabolite regions were found in these records:: NZ_CP064355.1

Compact view

NZ_CP064354.1 - Region 1 - arylpolyene

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Location: 589,898 - 633,496 nt. (total: 43,599 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001723.1	0.25	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000889.1	0.24	Other	bagremycin A, bagremycin B	Streptomyces sp. WK-5344
BGC0001366.1	0.24	Polyketide	BE-24566B, zunyimycin A	Streptomyces sp. FJS31-2
BGC0000231.1	0.24	Polyketide	griseusin	Streptomyces griseus
BGC0000234.1	0.23	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000228.1	0.22	Polyketide	granaticin	Streptomyces violaceoruber
BGC0002029.1	0.22	Other	bagremycin A, bagremycin B, bagremycin C, bagremycin E, bagremycin F, bagremycin G, ferroverdin A, ferroverdin B, ferroverdin C	Streptomyces lunaelactis
BGC0001592.1	0.22	Other	ferroverdin	Streptomyces lunaelactis
BGC0001897.1	0.22	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000248.1	0.21	Polyketide	naphtocyclinone	Streptomyces arenae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001723.1	0.58	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000889.1	0.57	Other	bagremycin A, bagremycin B	Streptomyces sp. WK-5344
BGC0001366.1	0.57	Polyketide	BE-24566B, zunyimycin A	Streptomyces sp. FJS31-2
BGC0000231.1	0.57	Polyketide	griseusin	Streptomyces griseus
BGC0000234.1	0.56	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000228.1	0.56	Polyketide	granaticin	Streptomyces violaceoruber
BGC0002029.1	0.55	Other	bagremycin A, bagremycin B, bagremycin C, bagremycin E, bagremycin F, bagremycin G, ferroverdin A, ferroverdin B, ferroverdin C	Streptomyces lunaelactis
BGC0001592.1	0.55	Other	ferroverdin	Streptomyces lunaelactis
BGC0001897.1	0.55	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000248.1	0.54	Polyketide	naphtocyclinone	Streptomyces arenae

Similar known gene clusters

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Detailed TIGRFAM domain annotation

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NZ_CP064354.1 - Region 2 - betalactone

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Location: 1,831,720 - 1,854,947 nt. (total: 23,228 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000649.1	0.20	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000234.1	0.20	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000890.1	0.20	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0000312.1	0.20	NRP	bassianolide	Beauveria bassiana
BGC0000891.1	0.20	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas luteoviolacea 2ta16
BGC0001465.1	0.20	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0001897.1	0.18	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001140.1	0.15	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0000131.1	0.15	Polyketide	pyrrolomycin	Streptomyces sp. UC 11065
BGC0000632.1	0.15	Terpene, Saccharide	brasilicardin A	Nocardia terpenica

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000649.1	0.53	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000234.1	0.53	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000890.1	0.52	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0000312.1	0.52	NRP	bassianolide	Beauveria bassiana
BGC0000891.1	0.52	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas luteoviolacea 2ta16
BGC0001465.1	0.52	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0001897.1	0.50	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001140.1	0.45	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0000131.1	0.45	Polyketide	pyrrolomycin	Streptomyces sp. UC 11065
BGC0000632.1	0.45	Terpene, Saccharide	brasilicardin A	Nocardia terpenica

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Detailed TIGRFAM domain annotation

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NZ_CP064354.1 - Region 3 - siderophore

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Location: 2,408,699 - 2,423,364 nt. (total: 14,666 nt) Show pHMM detection rules used

siderophore: IucA_IucC

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core biosynthetic genes

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Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001408.1	0.53	Other	xanthoferrin	Xanthomonas oryzae pv. oryzae KACC 10331
BGC0000946.1	0.51	Other	vibrioferrin	Vibrio parahaemolyticus
BGC0000942.1	0.25	Other	petrobactin	Bacillus anthracis str. Ames
BGC0000947.1	0.24	Other	vibrioferrin	Vibrio alginolyticus
BGC0001387.1	0.16	Other	nucleocidin	Streptomyces calvus
BGC0000943.1	0.13	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001690.1	0.06	Polyketide	natamycin	Streptomyces gilvosporeus
BGC0001093.1	0.05	NRP, Polyketide	disorazol A	Sorangium cellulosum
BGC0001770.1	0.05	Polyketide	sceliphrolactam	Streptomyces sp. SD85
BGC0001908.1	0.05	Polyketide	sceliphrolactam	Streptomyces sp. SD85

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001408.1	0.80	Other	xanthoferrin	Xanthomonas oryzae pv. oryzae KACC 10331
BGC0000946.1	0.79	Other	vibrioferrin	Vibrio parahaemolyticus
BGC0000942.1	0.59	Other	petrobactin	Bacillus anthracis str. Ames
BGC0000947.1	0.57	Other	vibrioferrin	Vibrio alginolyticus
BGC0001387.1	0.46	Other	nucleocidin	Streptomyces calvus
BGC0000943.1	0.42	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001690.1	0.25	Polyketide	natamycin	Streptomyces gilvosporeus
BGC0001093.1	0.23	NRP, Polyketide	disorazol A	Sorangium cellulosum
BGC0001770.1	0.22	Polyketide	sceliphrolactam	Streptomyces sp. SD85
BGC0001908.1	0.22	Polyketide	sceliphrolactam	Streptomyces sp. SD85

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NZ_CP064354.1 - Region 4 - NAGGN

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Location: 3,537,092 - 3,551,824 nt. (total: 14,733 nt) Show pHMM detection rules used

NAGGN: ((TIGR03104 or cds(GATase_7 and Asn_synthase)) and TIGR03103 and (TIGR03106 or Peptidase_M42))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000905.1	0.18	Other	heme D1	Heliobacillus mobilis
BGC0000906.1	0.18	Other	heme D1	Heliophilum fasciatum
BGC0000846.1	0.18	Other	tabtoxin	Pseudomonas syringae
BGC0000885.1	0.15	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0000937.1	0.14	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0001374.1	0.14	Other	thienodolin	Streptomyces albogriseolus
BGC0001739.1	0.12	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000796.1	0.09	Saccharide	S-layer glycan	Paenibacillus alvei
BGC0001395.1	0.09	Other	teichomycin	Actinoplanes teichomyceticus
BGC0000254.1	0.08	Polyketide	oxytetracycline	Streptomyces rimosus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000905.1	0.50	Other	heme D1	Heliobacillus mobilis
BGC0000906.1	0.50	Other	heme D1	Heliophilum fasciatum
BGC0000846.1	0.50	Other	tabtoxin	Pseudomonas syringae
BGC0000885.1	0.45	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0000937.1	0.43	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0001374.1	0.43	Other	thienodolin	Streptomyces albogriseolus
BGC0001739.1	0.40	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000796.1	0.33	Saccharide	S-layer glycan	Paenibacillus alvei
BGC0001395.1	0.32	Other	teichomycin	Actinoplanes teichomyceticus
BGC0000254.1	0.31	Polyketide	oxytetracycline	Streptomyces rimosus

Similar known gene clusters

No matches found.

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Detailed TIGRFAM domain annotation

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NZ_CP064354.1 - Region 5 - redox-cofactor

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Location: 4,831,920 - 4,854,082 nt. (total: 22,163 nt) Show pHMM detection rules used

redox-cofactor: (cds(PF04055 and (TIGR04085 or SPASM)) and (TIGR02111 or TIGR03966) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000258.1	0.22	Polyketide	prodigiosin	Serratia sp.
BGC0000259.1	0.21	Polyketide	prodigiosin	Serratia marcescens
BGC0000260.1	0.20	Polyketide	prodigiosin	Hahella chejuensis KCTC 2396
BGC0001441.1	0.18	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000723.1	0.16	Saccharide	β-D-galactosylvalidoxylamine-A	Streptomyces hygroscopicus subsp. limoneus
BGC0001223.1	0.15	Other	hydroxysporine	uncultured bacterium
BGC0000703.1	0.15	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001917.1	0.14	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0000919.1	0.14	Other	phaseolotoxin	Pseudomonas syringae
BGC0001440.1	0.14	Other	cystargolide A, cystargolide B	Kitasatospora cystarginea

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000258.1	0.55	Polyketide	prodigiosin	Serratia sp.
BGC0000259.1	0.54	Polyketide	prodigiosin	Serratia marcescens
BGC0000260.1	0.52	Polyketide	prodigiosin	Hahella chejuensis KCTC 2396
BGC0001441.1	0.50	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000723.1	0.46	Saccharide	β-D-galactosylvalidoxylamine-A	Streptomyces hygroscopicus subsp. limoneus
BGC0001223.1	0.45	Other	hydroxysporine	uncultured bacterium
BGC0000703.1	0.45	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001917.1	0.44	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0000919.1	0.44	Other	phaseolotoxin	Pseudomonas syringae
BGC0001440.1	0.44	Other	cystargolide A, cystargolide B	Kitasatospora cystarginea

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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