GCF_007814115.1_ASM781411v1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP031196.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	104,103	124,008
Region 1.2	T3PKS	376,963	418,132	capsular polysaccharide	Saccharide:Exopolysaccharide	3%
Region 1.3	siderophore	761,844	776,833	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 1.4	cyclic-lactone-autoinducer	905,401	926,134	kijanimicin	Polyketide	4%
Region 1.5	terpene	1,222,384	1,243,202	heme D1	Other	11%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	terpene	104,103	124,008
Region 1.2	T3PKS	376,963	418,132	capsular polysaccharide	Saccharide:Exopolysaccharide	3%
Region 1.3	siderophore	761,844	776,833	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 1.4	cyclic-lactone-autoinducer	905,401	926,134	kijanimicin	Polyketide	4%
Region 1.5	terpene	1,222,384	1,243,202	heme D1	Other	11%

No secondary metabolite regions were found in these records:: NZ_CP031197.1

Compact view

NZ_CP031196.1 - Region 1 - terpene

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Location: 104,103 - 124,008 nt. (total: 19,906 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

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Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.32	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000645.1	0.23	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000648.1	0.23	Terpene	carotenoid	Myxococcus xanthus
BGC0000636.1	0.22	Terpene	carotenoid	Brevibacterium linens
BGC0001227.1	0.21	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.1	0.21	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000633.1	0.20	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.20	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000646.1	0.19	Terpene	β-carotein	uncultured bacterium
BGC0000769.1	0.16	Saccharide	glycopeptidolipid	Mycobacterium avium subsp. hominissuis A5

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.65	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000645.1	0.56	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000648.1	0.56	Terpene	carotenoid	Myxococcus xanthus
BGC0000636.1	0.56	Terpene	carotenoid	Brevibacterium linens
BGC0001227.1	0.53	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.1	0.53	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000633.1	0.52	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.52	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000646.1	0.51	Terpene	β-carotein	uncultured bacterium
BGC0000769.1	0.47	Saccharide	glycopeptidolipid	Mycobacterium avium subsp. hominissuis A5

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP031196.1 - Region 2 - T3PKS

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Location: 376,963 - 418,132 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.22	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000867.1	0.17	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000255.1	0.17	Polyketide	pederin	Uncultured bacterium
BGC0000866.1	0.17	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001104.1	0.16	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000679.1	0.16	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0001739.1	0.16	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000205.1	0.16	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0000934.1	0.16	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000922.1	0.15	Other	pseudomonas quinolone signal (PQS)	Pseudomonas aeruginosa PAO1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.55	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000867.1	0.48	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000255.1	0.48	Polyketide	pederin	Uncultured bacterium
BGC0000866.1	0.48	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001104.1	0.47	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000679.1	0.47	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0001739.1	0.47	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000205.1	0.46	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0000934.1	0.46	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000922.1	0.46	Other	pseudomonas quinolone signal (PQS)	Pseudomonas aeruginosa PAO1

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP031196.1 - Region 3 - siderophore

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Location: 761,844 - 776,833 nt. (total: 14,990 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.54	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000939.1	0.31	Other	aerobactin	Grimontia hollisae
BGC0001870.1	0.22	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000947.1	0.19	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.17	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.15	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001767.1	0.09	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000708.1	0.09	Saccharide	lividomycin	Streptomyces lividus
BGC0000325.1	0.08	NRP	coelichelin	Streptomyces coelicolor A3(2)
BGC0001211.1	0.08	NRP	albachelin	Amycolatopsis alba DSM 44262

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.81	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000939.1	0.64	Other	aerobactin	Grimontia hollisae
BGC0001870.1	0.55	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000947.1	0.51	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.48	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.44	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001767.1	0.33	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000708.1	0.32	Saccharide	lividomycin	Streptomyces lividus
BGC0000325.1	0.32	NRP	coelichelin	Streptomyces coelicolor A3(2)
BGC0001211.1	0.31	NRP	albachelin	Amycolatopsis alba DSM 44262

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP031196.1 - Region 4 - cyclic-lactone-autoinducer

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Location: 905,401 - 926,134 nt. (total: 20,734 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.13	Polyketide	chartreusin	Streptomyces chartreusis
BGC0001687.1	0.13	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0000540.1	0.13	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0000624.1	0.09	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001053.1	0.08	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0001836.1	0.07	Polyketide	tartrolon D, tartrolon F, tartrolon G	Gynuella sunshinyii YC6258
BGC0001130.1	0.07	NRP, Polyketide	fabclavine Ia	Xenorhabdus budapestensis
BGC0001056.1	0.06	NRP, Polyketide	zeamine, zeamine I, zeamine II, prezeamine, prezeamine I	Serratia plymuthica RVH1
BGC0000082.1	0.06	Polyketide	kijanimicin	Actinomadura kijaniata
BGC0001700.1	0.05	Polyketide	niphimycins C-E	Streptomyces sp. IMB7-145

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.42	Polyketide	chartreusin	Streptomyces chartreusis
BGC0001687.1	0.42	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0000540.1	0.41	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0000624.1	0.33	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001053.1	0.30	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0001836.1	0.29	Polyketide	tartrolon D, tartrolon F, tartrolon G	Gynuella sunshinyii YC6258
BGC0001130.1	0.27	NRP, Polyketide	fabclavine Ia	Xenorhabdus budapestensis
BGC0001056.1	0.24	NRP, Polyketide	zeamine, zeamine I, zeamine II, prezeamine, prezeamine I	Serratia plymuthica RVH1
BGC0000082.1	0.24	Polyketide	kijanimicin	Actinomadura kijaniata
BGC0001700.1	0.22	Polyketide	niphimycins C-E	Streptomyces sp. IMB7-145

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP031196.1 - Region 5 - terpene

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Location: 1,222,384 - 1,243,202 nt. (total: 20,819 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000859.1	0.23	Other	ectoine	Methylomicrobium alcaliphilum
BGC0001685.1	0.18	Other	N-acyloxyacyl lysine	Raoultella ornithinolytica 10-5246
BGC0000854.1	0.18	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0000698.1	0.14	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0000906.1	0.13	Other	heme D1	Heliophilum fasciatum
BGC0000905.1	0.13	Other	heme D1	Heliobacillus mobilis
BGC0001090.1	0.06	NRP, Polyketide	bacillomycin D	Bacillus velezensis FZB42
BGC0001098.1	0.06	NRP, Polyketide	iturin	Bacillus subtilis
BGC0001221.1	0.05	Other (Phenazine)	marinophenazine A, phenaziterpene A	Streptomyces sp. CNQ-509
BGC0001103.1	0.05	NRP, Polyketide	mycosubtilin	Bacillus subtilis subsp. spizizenii ATCC 6633

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000859.1	0.56	Other	ectoine	Methylomicrobium alcaliphilum
BGC0001685.1	0.50	Other	N-acyloxyacyl lysine	Raoultella ornithinolytica 10-5246
BGC0000854.1	0.49	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0000698.1	0.43	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0000906.1	0.41	Other	heme D1	Heliophilum fasciatum
BGC0000905.1	0.41	Other	heme D1	Heliobacillus mobilis
BGC0001090.1	0.26	NRP, Polyketide	bacillomycin D	Bacillus velezensis FZB42
BGC0001098.1	0.26	NRP, Polyketide	iturin	Bacillus subtilis
BGC0001221.1	0.23	Other (Phenazine)	marinophenazine A, phenaziterpene A	Streptomyces sp. CNQ-509
BGC0001103.1	0.23	NRP, Polyketide	mycosubtilin	Bacillus subtilis subsp. spizizenii ATCC 6633

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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