GCF_000621505.1_ASM62150v1_genomic - 22 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_JHYD01000002 (original name was: NZ_JHYD01000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	NRPS	82,007	129,467
Region 2.2	ranthipeptide	320,657	342,087

NZ_JHYD01000003 (original name was: NZ_JHYD01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	ladderane	31,878	75,918
Region 3.2	NRPS-like,NRPS,T1PKS	203,951	260,810
Region 3.3	NRPS	267,826	316,824	equibactin	NRP	21%

NZ_JHYD01000009 (original name was: NZ_JHYD01000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RRE-containing	176,519	197,958

NZ_JHYD01000010 (original name was: NZ_JHYD01000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	cyclic-lactone-autoinducer	29,251	49,968

NZ_KK211292.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	NRPS,T1PKS,transAT-PKS	137,152	208,504	microsclerodermin M	NRP + Polyketide:Modular type I	27%

NZ_KK211293.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	141,533	152,348

NZ_KK211295.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	NRPS,ranthipeptide	1	59,208

NZ_JHYD01000025 (original name was: NZ_JHYD01000025.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	ranthipeptide	58,417	79,877
Region 16.2	cyclic-lactone-autoinducer	85,211	105,777

NZ_JHYD01000031 (original name was: NZ_JHYD01000031.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	ranthipeptide	4,590	32,599

NZ_JHYD01000032 (original name was: NZ_JHYD01000032.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	cyclic-lactone-autoinducer	67,934	88,557

NZ_JHYD01000033 (original name was: NZ_JHYD01000033.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	cyclic-lactone-autoinducer	18,940	39,533

NZ_JHYD01000037 (original name was: NZ_JHYD01000037.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	NRPS	41,446	85,792

NZ_JHYD01000041 (original name was: NZ_JHYD01000041.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	betalactone	1	20,690

NZ_JHYD01000045 (original name was: NZ_JHYD01000045.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	transAT-PKS-like,NRPS	14,074	55,758

NZ_JHYD01000063 (original name was: NZ_JHYD01000063.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 51.1	NRPS	1	16,139	paenilarvins	NRP	50%

NZ_JHYD01000072 (original name was: NZ_JHYD01000072.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 60.1	NRPS	1	4,656

NZ_JHYD01000079 (original name was: NZ_JHYD01000079.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	NRPS	1	2,215

NZ_JHYD01000080 (original name was: NZ_JHYD01000080.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 68.1	NRPS	1	1,880

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	NRPS	82,007	129,467
Region 2.2	ranthipeptide	320,657	342,087
Region 3.1	ladderane	31,878	75,918
Region 3.2	NRPS-like,NRPS,T1PKS	203,951	260,810
Region 3.3	NRPS	267,826	316,824	equibactin	NRP	21%
Region 6.1	RRE-containing	176,519	197,958
Region 7.1	cyclic-lactone-autoinducer	29,251	49,968
Region 9.1	NRPS,T1PKS,transAT-PKS	137,152	208,504	microsclerodermin M	NRP + Polyketide:Modular type I	27%
Region 11.1	RiPP-like	141,533	152,348
Region 13.1	NRPS,ranthipeptide	1	59,208
Region 16.1	ranthipeptide	58,417	79,877
Region 16.2	cyclic-lactone-autoinducer	85,211	105,777
Region 21.1	ranthipeptide	4,590	32,599
Region 22.1	cyclic-lactone-autoinducer	67,934	88,557
Region 23.1	cyclic-lactone-autoinducer	18,940	39,533
Region 26.1	NRPS	41,446	85,792
Region 30.1	betalactone	1	20,690
Region 33.1	transAT-PKS-like,NRPS	14,074	55,758
Region 51.1	NRPS	1	16,139	paenilarvins	NRP	50%
Region 60.1	NRPS	1	4,656
Region 67.1	NRPS	1	2,215
Region 68.1	NRPS	1	1,880

No secondary metabolite regions were found in these records:: NZ_JHYD01000001 (original name was: NZ_JHYD01000001.1); NZ_KK211289.1; NZ_KK211290.1; NZ_KK211291.1; NZ_JHYD01000015 (original name was: NZ_JHYD01000015.1); NZ_KK211294.1; NZ_JHYD01000023 (original name was: NZ_JHYD01000023.1); NZ_JHYD01000024 (original name was: NZ_JHYD01000024.1); NZ_JHYD01000026 (original name was: NZ_JHYD01000026.1); NZ_JHYD01000027 (original name was: NZ_JHYD01000027.1); NZ_KK211296.1; NZ_JHYD01000030 (original name was: NZ_JHYD01000030.1); NZ_JHYD01000034 (original name was: NZ_JHYD01000034.1); NZ_KK211297.1; NZ_JHYD01000038 (original name was: NZ_JHYD01000038.1); NZ_JHYD01000039 (original name was: NZ_JHYD01000039.1); NZ_JHYD01000040 (original name was: NZ_JHYD01000040.1); NZ_KK211298.1; NZ_JHYD01000044 (original name was: NZ_JHYD01000044.1); NZ_JHYD01000046 (original name was: NZ_JHYD01000046.1); NZ_JHYD01000047 (original name was: NZ_JHYD01000047.1); NZ_JHYD01000048 (original name was: NZ_JHYD01000048.1); NZ_JHYD01000049 (original name was: NZ_JHYD01000049.1); NZ_JHYD01000050 (original name was: NZ_JHYD01000050.1); NZ_JHYD01000051 (original name was: NZ_JHYD01000051.1); NZ_JHYD01000052 (original name was: NZ_JHYD01000052.1); NZ_JHYD01000053 (original name was: NZ_JHYD01000053.1); NZ_JHYD01000054 (original name was: NZ_JHYD01000054.1); NZ_JHYD01000055 (original name was: NZ_JHYD01000055.1); NZ_JHYD01000056 (original name was: NZ_JHYD01000056.1); NZ_JHYD01000057 (original name was: NZ_JHYD01000057.1); NZ_JHYD01000058 (original name was: NZ_JHYD01000058.1); NZ_JHYD01000059 (original name was: NZ_JHYD01000059.1); NZ_JHYD01000060 (original name was: NZ_JHYD01000060.1); NZ_JHYD01000061 (original name was: NZ_JHYD01000061.1); NZ_JHYD01000062 (original name was: NZ_JHYD01000062.1); NZ_JHYD01000064 (original name was: NZ_JHYD01000064.1); NZ_JHYD01000065 (original name was: NZ_JHYD01000065.1); NZ_JHYD01000066 (original name was: NZ_JHYD01000066.1); NZ_JHYD01000067 (original name was: NZ_JHYD01000067.1); NZ_JHYD01000068 (original name was: NZ_JHYD01000068.1); NZ_JHYD01000069 (original name was: NZ_JHYD01000069.1); NZ_JHYD01000070 (original name was: NZ_JHYD01000070.1); NZ_JHYD01000071 (original name was: NZ_JHYD01000071.1); NZ_JHYD01000073 (original name was: NZ_JHYD01000073.1); NZ_JHYD01000074 (original name was: NZ_JHYD01000074.1); NZ_JHYD01000075 (original name was: NZ_JHYD01000075.1); NZ_JHYD01000076 (original name was: NZ_JHYD01000076.1); NZ_JHYD01000077 (original name was: NZ_JHYD01000077.1); NZ_JHYD01000078 (original name was: NZ_JHYD01000078.1); NZ_JHYD01000081 (original name was: NZ_JHYD01000081.1); NZ_JHYD01000082 (original name was: NZ_JHYD01000082.1); NZ_JHYD01000083 (original name was: NZ_JHYD01000083.1); NZ_JHYD01000084 (original name was: NZ_JHYD01000084.1); NZ_JHYD01000085 (original name was: NZ_JHYD01000085.1); NZ_JHYD01000086 (original name was: NZ_JHYD01000086.1); NZ_JHYD01000087 (original name was: NZ_JHYD01000087.1); NZ_JHYD01000088 (original name was: NZ_JHYD01000088.1); NZ_JHYD01000089 (original name was: NZ_JHYD01000089.1); NZ_JHYD01000090 (original name was: NZ_JHYD01000090.1); NZ_JHYD01000091 (original name was: NZ_JHYD01000091.1); NZ_JHYD01000092 (original name was: NZ_JHYD01000092.1)

Compact view

c00002_NZ_JHYD.. - Region 1 - NRPS

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Location: 82,007 - 129,467 nt. (total: 47,461 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001399.1	0.31	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001686.1	0.30	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0000410.1	0.29	NRP	pseudomonine	Pseudomonas fluorescens
BGC0000457.1	0.28	NRP	vicibactin	Rhizobium etli CFN 42
BGC0000342.1	0.26	NRP	enniatin	Fusarium equiseti
BGC0001873.1	0.25	NRP	pyrrolizixenamide A	Xenorhabdus szentirmaii DSM 16338
BGC0000308.1	0.25	NRP	aureusimine	Staphylococcus aureus subsp. aureus str. JKD6008
BGC0000321.1	0.25	NRP	chaetocin	Collariella virescens
BGC0000313.1	0.25	NRP	beauvericin	Beauveria bassiana
BGC0001825.1	0.24	NRP	xenematide	Xenorhabdus nematophila AN6/1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001399.1	0.64	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001686.1	0.64	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0000410.1	0.62	NRP	pseudomonine	Pseudomonas fluorescens
BGC0000457.1	0.62	NRP	vicibactin	Rhizobium etli CFN 42
BGC0000342.1	0.59	NRP	enniatin	Fusarium equiseti
BGC0001873.1	0.59	NRP	pyrrolizixenamide A	Xenorhabdus szentirmaii DSM 16338
BGC0000308.1	0.59	NRP	aureusimine	Staphylococcus aureus subsp. aureus str. JKD6008
BGC0000321.1	0.58	NRP	chaetocin	Collariella virescens
BGC0000313.1	0.58	NRP	beauvericin	Beauveria bassiana
BGC0001825.1	0.58	NRP	xenematide	Xenorhabdus nematophila AN6/1

Similar known gene clusters

No matches found.

Module view

Legend

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 82006 - 129467:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn - bht)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg2_111

Search NORINE for peptide: strict or relaxed

AMP-binding (475..867): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (1502..1886): bht

NRPSPredictor2: bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DASvIAdVCK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 80% (moderate)

c00002_NZ_JHYD.. - Region 2 - ranthipeptide

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Location: 320,657 - 342,087 nt. (total: 21,431 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000600.1	0.16	RiPP	thurincin H	Bacillus thuringiensis
BGC0000703.1	0.16	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000486.1	0.15	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000601.1	0.14	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0001928.1	0.14	Other	(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid	Streptomyces sp. MA37
BGC0001765.1	0.14	Saccharide	salecan	Agrobacterium tumefaciens
BGC0000586.1	0.13	RiPP	microcin E492	Klebsiella pneumoniae RYC492
BGC0001120.1	0.13	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000294.1	0.13	NRP	acinetobactin	Acinetobacter baumannii
BGC0000588.1	0.13	RiPP	microcin L	Escherichia coli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000600.1	0.47	RiPP	thurincin H	Bacillus thuringiensis
BGC0000703.1	0.46	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000486.1	0.46	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000601.1	0.44	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0001928.1	0.43	Other	(2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid	Streptomyces sp. MA37
BGC0001765.1	0.43	Saccharide	salecan	Agrobacterium tumefaciens
BGC0000586.1	0.42	RiPP	microcin E492	Klebsiella pneumoniae RYC492
BGC0001120.1	0.42	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000294.1	0.42	NRP	acinetobactin	Acinetobacter baumannii
BGC0000588.1	0.42	RiPP	microcin L	Escherichia coli

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00003_NZ_JHYD.. - Region 1 - ladderane

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Location: 31,878 - 75,918 nt. (total: 44,041 nt) Show pHMM detection rules used

ladderane: ladderane

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001723.1	0.24	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000231.1	0.24	Polyketide	griseusin	Streptomyces griseus
BGC0001177.1	0.23	Polyketide	mensacaricin	Streptomyces bottropensis
BGC0001343.1	0.23	Polyketide	aurachin A, aurachin D	Stigmatella aurantiaca Sg a15
BGC0000261.1	0.23	Polyketide	R1128	Streptomyces sp. R1128
BGC0000234.1	0.23	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000236.1	0.23	Polyketide	kinamycin	Streptomyces murayamaensis
BGC0000837.1	0.22	Other	APE Vf	Aliivibrio fischeri ES114
BGC0002008.1	0.22	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0001197.1	0.22	Polyketide	frankiamicin	Frankia sp. EAN1pec

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001723.1	0.58	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000231.1	0.57	Polyketide	griseusin	Streptomyces griseus
BGC0001177.1	0.56	Polyketide	mensacaricin	Streptomyces bottropensis
BGC0001343.1	0.56	Polyketide	aurachin A, aurachin D	Stigmatella aurantiaca Sg a15
BGC0000261.1	0.56	Polyketide	R1128	Streptomyces sp. R1128
BGC0000234.1	0.56	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000236.1	0.56	Polyketide	kinamycin	Streptomyces murayamaensis
BGC0000837.1	0.55	Other	APE Vf	Aliivibrio fischeri ES114
BGC0002008.1	0.55	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0001197.1	0.55	Polyketide	frankiamicin	Frankia sp. EAN1pec

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00003_NZ_JHYD.. - Region 2 - NRPS,NRPS-like,T1PKS

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Location: 203,951 - 260,810 nt. (total: 56,860 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001160.1	0.85	Polyketide	1-nonadecene, (14Z)-1,14-nonadecadiene	Synechococcus sp. PCC 7002
BGC0001163.1	0.76	Polyketide	1-heptadecene	Moorea producens 3L
BGC0001162.1	0.75	Polyketide	1-heptadecene	Moorea producens JHB
BGC0001161.1	0.75	Polyketide	1-heptadecene	Moorea bouillonii PNG
BGC0001831.1	0.66	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0001023.1	0.63	NRP, Polyketide	myxochromide S1	Stigmatella aurantiaca
BGC0001758.1	0.62	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001844.1	0.62	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001275.1	0.62	Polyketide	6-methylsalicyclic acid	Glarea lozoyensis
BGC0001135.1	0.62	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001160.1	0.62	Polyketide	1-nonadecene, (14Z)-1,14-nonadecadiene	Synechococcus sp. PCC 7002
BGC0001163.1	0.59	Polyketide	1-heptadecene	Moorea producens 3L
BGC0001162.1	0.58	Polyketide	1-heptadecene	Moorea producens JHB
BGC0001161.1	0.58	Polyketide	1-heptadecene	Moorea bouillonii PNG
BGC0001831.1	0.57	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0000343.1	0.57	NRP	enterobactin	Pseudomonas sp. J465
BGC0001292.1	0.56	Other	A33853	Streptomyces sp. NRRL 12068
BGC0000935.1	0.54	Other (Aminocoumarin), Polyketide	esmeraldin	Streptomyces antibioticus
BGC0001023.1	0.54	NRP, Polyketide	myxochromide S1	Stigmatella aurantiaca
BGC0001897.1	0.54	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10

Similar known gene clusters

No matches found.

Module view

Legend

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 203950 - 260810:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 203950 - 244709:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 4, location 207716 - 251202:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 5, location 213553 - 260810:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg3_207

CAL_domain (177..480): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 84.1
NH2: 50.7
Acetyl-CoA: 10.3
shikimic_acid: 0.0
AHBA: 0.0

ctg3_209

Search NORINE for peptide: strict or relaxed

AMP-binding (775..1199): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DiWHISLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 90% (moderate)

ctg3_211

PKS_AT (575..858): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 79.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 130.1
inactive: 100.1
Methoxymalonyl-CoA: 43.0
Methylmalonyl-CoA: 33.4
Propionyl-CoA: 13.1
fatty_acid: 9.7
Acetyl-CoA: 8.7
trans-1,2-CPDA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

c00003_NZ_JHYD.. - Region 3 - NRPS

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Location: 267,826 - 316,824 nt. (total: 48,999 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000389.1	0.31	NRP	massetolide A	Pseudomonas fluorescens SS101
BGC0000412.1	0.30	NRP	pyochelin	Pseudomonas aeruginosa PAO1
BGC0000373.1	0.26	NRP	holomycin	Streptomyces clavuligerus ATCC 27064
BGC0000460.1	0.24	NRP	vulnibactin	Vibrio vulnificus CMCP6
BGC0000343.1	0.22	NRP	enterobactin	Pseudomonas sp. J465
BGC0000351.1	0.22	NRP	exochelin	Mycolicibacterium smegmatis
BGC0001591.1	0.22	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.22	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0000347.1	0.21	NRP	equibactin	Streptococcus equi subsp. equi
BGC0000427.1	0.21	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000389.1	0.64	NRP	massetolide A	Pseudomonas fluorescens SS101
BGC0000412.1	0.63	NRP	pyochelin	Pseudomonas aeruginosa PAO1
BGC0000373.1	0.60	NRP	holomycin	Streptomyces clavuligerus ATCC 27064
BGC0000460.1	0.57	NRP	vulnibactin	Vibrio vulnificus CMCP6
BGC0000343.1	0.55	NRP	enterobactin	Pseudomonas sp. J465
BGC0000351.1	0.55	NRP	exochelin	Mycolicibacterium smegmatis
BGC0001591.1	0.54	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.54	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0000347.1	0.54	NRP	equibactin	Streptococcus equi subsp. equi
BGC0000427.1	0.54	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413

Similar known gene clusters

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Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 6, location 267825 - 316824:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys) + (Me-cys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg3_254

Search NORINE for peptide: strict or relaxed

AMP-binding (30..434): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: N/A
Small clusters prediction:: dhb, sal
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: PLPgQGiiCK
Nearest Stachelhaus code:: dhb
Stachelhaus code match:: 70% (weak)

ctg3_255

Search NORINE for peptide: strict or relaxed

AMP-binding (560..955): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNMSMIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

ctg3_256

Search NORINE for peptide: strict or relaxed

AMP-binding (532..927): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNiSkIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 80% (moderate)

c00006_NZ_JHYD.. - Region 1 - RRE-containing

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Location: 176,519 - 197,958 nt. (total: 21,440 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001651.1	0.15	Other	legionaminic acid	Tannerella forsythia 92A2
BGC0001887.1	0.14	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0001810.1	0.14	Polyketide	trehangelin	Polymorphospora rubra
BGC0001150.1	0.14	Polyketide	pamamycin-607	Streptomyces alboniger
BGC0001965.1	0.14	Other	nybomycin	Streptomyces albus subsp. chlorinus
BGC0001850.1	0.14	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001
BGC0000703.1	0.13	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000286.1	0.12	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0001935.1	0.12	Other	3,7-dihydroxytropolone	Streptomyces cyaneofuscatus
BGC0001487.1	0.12	Other	3,7-dihydroxytropolone	Streptomyces cyaneofuscatus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001651.1	0.44	Other	legionaminic acid	Tannerella forsythia 92A2
BGC0001887.1	0.44	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0001810.1	0.44	Polyketide	trehangelin	Polymorphospora rubra
BGC0001150.1	0.44	Polyketide	pamamycin-607	Streptomyces alboniger
BGC0001965.1	0.44	Other	nybomycin	Streptomyces albus subsp. chlorinus
BGC0001850.1	0.43	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001
BGC0000703.1	0.42	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000286.1	0.40	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0001935.1	0.39	Other	3,7-dihydroxytropolone	Streptomyces cyaneofuscatus
BGC0001487.1	0.39	Other	3,7-dihydroxytropolone	Streptomyces cyaneofuscatus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00007_NZ_JHYD.. - Region 1 - cyclic-lactone-autoinducer

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Location: 29,251 - 49,968 nt. (total: 20,718 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.22	RiPP	circularin A	Clostridium beijerinckii
BGC0001525.1	0.17	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001526.1	0.17	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000571.1	0.16	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001407.1	0.16	RiPP	bicereucin	Bacillus cereus SJ1
BGC0001494.1	0.16	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0001391.1	0.16	RiPP	thusin	Bacillus thuringiensis serovar rongseni
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001229.1	0.16	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.55	RiPP	circularin A	Clostridium beijerinckii
BGC0001525.1	0.48	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001526.1	0.48	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000571.1	0.47	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001407.1	0.47	RiPP	bicereucin	Bacillus cereus SJ1
BGC0001494.1	0.47	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0001391.1	0.47	RiPP	thusin	Bacillus thuringiensis serovar rongseni
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001229.1	0.47	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_KK211292.1 - Region 1 - NRPS,T1PKS,transAT-PKS

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Location: 137,152 - 208,504 nt. (total: 71,353 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))

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Pfam domains

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Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001050.1	1.20	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0000979.1	0.99	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E9
BGC0000980.1	0.99	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 22D11
BGC0001023.1	0.99	NRP, Polyketide	myxochromide S1	Stigmatella aurantiaca
BGC0000427.1	0.98	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001128.1	0.95	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001135.1	0.93	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0000457.1	0.93	NRP	vicibactin	Rhizobium etli CFN 42
BGC0000389.1	0.92	NRP	massetolide A	Pseudomonas fluorescens SS101
BGC0001833.1	0.92	NRP	icosalide A, icosalide B	Burkholderia gladioli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001050.1	0.72	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0000979.1	0.70	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E9
BGC0000980.1	0.70	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 22D11
BGC0000427.1	0.70	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0000375.1	0.68	NRP	indigoidine	Streptomyces chromofuscus
BGC0001023.1	0.66	NRP, Polyketide	myxochromide S1	Stigmatella aurantiaca
BGC0001128.1	0.66	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001561.1	0.66	NRP	curacomycin	Streptomyces curacoi
BGC0000457.1	0.66	NRP	vicibactin	Rhizobium etli CFN 42
BGC0000460.1	0.66	NRP	vulnibactin	Vibrio vulnificus CMCP6

Similar known gene clusters

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Detailed TIGRFAM domain annotation

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 137151 - 208504:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly) + (pk) + (ser) + (X) + (val)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg9_121

Search NORINE for peptide: strict or relaxed

CAL_domain (164..476): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 116.8
NH2: 18.6
shikimic_acid: 0.0
Acetyl-CoA: 0.0
AHBA: 0.0

AMP-binding (1137..1532): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGVIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

ctg9_122

PKS_AT (537..737): pk

ATSignature: (unknown)

No matches above 50%

minowa: inactive

Prediction, score:

inactive: 30.3
Malonyl-CoA: 19.2
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Propionyl-CoA: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

ctg9_123

Search NORINE for peptide: strict or relaxed

AMP-binding (539..942): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

ctg9_125

PKS_AT (6..294): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 66.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 87.1
inactive: 35.8
Methoxymalonyl-CoA: 32.4
Methylmalonyl-CoA: 23.7
Propionyl-CoA: 11.7
Ethylmalonyl-CoA: 10.5
Acetyl-CoA: 9.6
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

ctg9_126

Search NORINE for peptide: strict or relaxed

AMP-binding (540..939): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DvaNFCIiYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 70% (weak)

ctg9_128

Search NORINE for peptide: strict or relaxed

AMP-binding (6..410): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: asGfnySprK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 30% (weak)

ctg9_133

Search NORINE for peptide: strict or relaxed

AMP-binding (277..671): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAFWlGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

NZ_KK211293.1 - Region 1 - RiPP-like

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Location: 141,533 - 152,348 nt. (total: 10,816 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

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Analysis type:

Reference	RiPP-like	Similarity score	Type	Compound(s)	Organism
BGC0000131.1		0.17	Polyketide	pyrrolomycin	Streptomyces sp. UC 11065
BGC0001521.1		0.14	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0000131.1		0.48	Polyketide	pyrrolomycin	Streptomyces sp. UC 11065
BGC0001521.1		0.43	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_KK211295.1 - Region 1 - NRPS,ranthipeptide

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Location: 1 - 59,208 nt. (total: 59,208 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))
ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

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Pfam domains

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Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000601.1	0.36	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0001479.1	0.34	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001586.1	0.32	Saccharide	EPS273	Pseudomonas stutzeri
BGC0001135.1	0.32	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0000294.1	0.32	NRP	acinetobactin	Acinetobacter baumannii
BGC0001393.1	0.32	NRP	lugdunin	Staphylococcus lugdunensis N920143
BGC0000504.1	0.31	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000901.1	0.31	Other	ferrichrome	Aspergillus niger
BGC0001515.1	0.31	NRP	aspercryptins	Aspergillus nidulans FGSC A4
BGC0001407.1	0.31	RiPP	bicereucin	Bacillus cereus SJ1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001479.1	0.67	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001135.1	0.66	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0000901.1	0.65	Other	ferrichrome	Aspergillus niger
BGC0000389.1	0.64	NRP	massetolide A	Pseudomonas fluorescens SS101
BGC0001249.1	0.64	NRP	dimethylcoprogen	Alternaria alternata
BGC0000426.1	0.64	NRP	sevadicin	Paenibacillus larvae
BGC0000900.1	0.64	Other	ferrichrome	Aspergillus oryzae
BGC0000348.1	0.64	NRP	ergovaline	Epichloe festucae var. lolii
BGC0001833.1	0.64	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001132.1	0.64	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061

Similar known gene clusters

No matches found.

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Legend

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 59208:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly - D-X - X) + (D-cys) + (X - gly) + (asn - X - asn)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 0 - 58049:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly - D-X - X) + (D-cys) + (X - gly) + (asn - X - asn)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg13_1

Search NORINE for peptide: strict or relaxed

AMP-binding (274..670): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (1314..1717): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFgLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 90% (moderate)

AMP-binding (2359..2761): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

ctg13_2

Search NORINE for peptide: strict or relaxed

AMP-binding (469..862): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DmfqIGAVFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 70% (weak)

AMP-binding (1509..1903): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

ctg13_4

Search NORINE for peptide: strict or relaxed

CAL_domain (167..477): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 151.2
NH2: 11.0
shikimic_acid: 0.0
Acetyl-CoA: 0.0
AHBA: 0.0

AMP-binding (1133..1514): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

ctg13_6

Search NORINE for peptide: strict or relaxed

AMP-binding (271..666): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQmGMIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 90% (moderate)

AMP-binding (1342..1743): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: vAWeVtAddK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 50% (weak)

AMP-binding (2856..3257): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: vAWeVtAddK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 50% (weak)

c00016_NZ_JHYD.. - Region 1 - ranthipeptide

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Location: 58,417 - 79,877 nt. (total: 21,461 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001891.1	0.16	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0001540.1	0.15	Other	CC-1065	Streptomyces zelensis
BGC0001887.1	0.15	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0001607.1	0.15	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0001637.1	0.09	NRP	kleboxymycin	Klebsiella oxytoca
BGC0001228.1	0.09	NRP	retimycin A	Salinispora arenicola CNT005
BGC0000450.1	0.08	NRP	triostin A	Streptomyces triostinicus
BGC0000415.1	0.08	NRP	quinomycin	Streptomyces griseovariabilis subsp. bandungensis
BGC0000247.1	0.08	Polyketide, Saccharide	mithramycin	Streptomyces argillaceus
BGC0000448.1	0.08	NRP	tomaymycin	Streptomyces achromogenes

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001891.1	0.46	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0001540.1	0.45	Other	CC-1065	Streptomyces zelensis
BGC0001887.1	0.45	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0001607.1	0.45	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0001637.1	0.34	NRP	kleboxymycin	Klebsiella oxytoca
BGC0001228.1	0.33	NRP	retimycin A	Salinispora arenicola CNT005
BGC0000450.1	0.31	NRP	triostin A	Streptomyces triostinicus
BGC0000415.1	0.31	NRP	quinomycin	Streptomyces griseovariabilis subsp. bandungensis
BGC0000247.1	0.30	Polyketide, Saccharide	mithramycin	Streptomyces argillaceus
BGC0000448.1	0.30	NRP	tomaymycin	Streptomyces achromogenes

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00016_NZ_JHYD.. - Region 2 - cyclic-lactone-autoinducer

Download region GenBank file

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Location: 85,211 - 105,777 nt. (total: 20,567 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000214.1	0.19	Polyketide	cosmomycin B	Streptomyces olindensis
BGC0001654.1	0.19	Saccharide	lipooligosaccharide	Bacteroides thetaiotaomicron VPI-5482
BGC0000797.1	0.17	Saccharide	sphingan polysaccharide	Sphingomonas sp. S88
BGC0000759.1	0.17	Saccharide	diutan polysaccharide	Sphingomonas sp. ATCC 53159
BGC0000768.1	0.17	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0000803.1	0.16	Saccharide	GG exopolysaccharide	Lactobacillus rhamnosus GG
BGC0000724.1	0.16	Saccharide	streptomycin	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000690.1	0.16	Saccharide	hydroxystreptomycin	Streptomyces glaucescens
BGC0000813.1	0.16	Alkaloid	K-252a	Nonomuraea longicatena
BGC0000796.1	0.16	Saccharide	S-layer glycan	Paenibacillus alvei

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000214.1	0.52	Polyketide	cosmomycin B	Streptomyces olindensis
BGC0001654.1	0.51	Saccharide	lipooligosaccharide	Bacteroides thetaiotaomicron VPI-5482
BGC0000797.1	0.48	Saccharide	sphingan polysaccharide	Sphingomonas sp. S88
BGC0000759.1	0.48	Saccharide	diutan polysaccharide	Sphingomonas sp. ATCC 53159
BGC0000768.1	0.47	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0000803.1	0.47	Saccharide	GG exopolysaccharide	Lactobacillus rhamnosus GG
BGC0000724.1	0.47	Saccharide	streptomycin	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000690.1	0.47	Saccharide	hydroxystreptomycin	Streptomyces glaucescens
BGC0000813.1	0.47	Alkaloid	K-252a	Nonomuraea longicatena
BGC0000796.1	0.46	Saccharide	S-layer glycan	Paenibacillus alvei

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00021_NZ_JHYD.. - Region 1 - ranthipeptide

Download region GenBank file

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Location: 4,590 - 32,599 nt. (total: 28,010 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000880.1	0.21	Other (Nucleoside)	tunicamycin B1	Streptomyces chartreusis NRRL 3882
BGC0001929.1	0.21	RiPP	WGK	Streptococcus ferus
BGC0000796.1	0.19	Saccharide	S-layer glycan	Paenibacillus alvei
BGC0000575.1	0.19	RiPP	lariatin	Rhodococcus jostii
BGC0001526.1	0.18	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000601.1	0.18	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0001645.1	0.17	RiPP	lagmysin	Streptomyces sp. NRRL S-118
BGC0000792.1	0.17	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001356.1	0.17	RiPP	paeninodin	Paenibacillus dendritiformis C454
BGC0001525.1	0.17	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000880.1	0.53	Other (Nucleoside)	tunicamycin B1	Streptomyces chartreusis NRRL 3882
BGC0001929.1	0.53	RiPP	WGK	Streptococcus ferus
BGC0000796.1	0.52	Saccharide	S-layer glycan	Paenibacillus alvei
BGC0000575.1	0.51	RiPP	lariatin	Rhodococcus jostii
BGC0001526.1	0.49	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000601.1	0.49	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0001645.1	0.49	RiPP	lagmysin	Streptomyces sp. NRRL S-118
BGC0000792.1	0.49	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001356.1	0.49	RiPP	paeninodin	Paenibacillus dendritiformis C454
BGC0001525.1	0.49	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00022_NZ_JHYD.. - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

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Location: 67,934 - 88,557 nt. (total: 20,624 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000863.1	0.08	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0001575.1	0.08	NRP	dipeptide aldehydes	Ruminococcus sp. 5_1_39BFAA
BGC0000861.1	0.07	Other	eicosapentaenoic acid	Shewanella sp. BR-2
BGC0000452.1	0.06	NRP	tyrocidine	Brevibacillus brevis NBRC 100599
BGC0000403.1	0.06	NRP	pelgipeptin	Paenibacillus elgii
BGC0000984.1	0.06	NRP, Polyketide	delftibactin A, delftibactin B	Delftia acidovorans SPH-1
BGC0000320.1	0.06	NRP	cereulide	Bacillus cereus
BGC0000862.1	0.06	Other	eicosapentaenoic acid	Shewanella pneumatophori
BGC0001625.1	0.05	Polyketide	isofuranonaphthoquinone	Streptomyces sp. CB01883
BGC0001386.1	0.05	Polyketide	JBIR-76, JBIR-77	Streptomyces sp. RI-77

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000863.1	0.30	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0001575.1	0.30	NRP	dipeptide aldehydes	Ruminococcus sp. 5_1_39BFAA
BGC0000861.1	0.29	Other	eicosapentaenoic acid	Shewanella sp. BR-2
BGC0000452.1	0.26	NRP	tyrocidine	Brevibacillus brevis NBRC 100599
BGC0000403.1	0.25	NRP	pelgipeptin	Paenibacillus elgii
BGC0000984.1	0.25	NRP, Polyketide	delftibactin A, delftibactin B	Delftia acidovorans SPH-1
BGC0000320.1	0.25	NRP	cereulide	Bacillus cereus
BGC0000862.1	0.25	Other	eicosapentaenoic acid	Shewanella pneumatophori
BGC0001625.1	0.24	Polyketide	isofuranonaphthoquinone	Streptomyces sp. CB01883
BGC0001386.1	0.24	Polyketide	JBIR-76, JBIR-77	Streptomyces sp. RI-77

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00023_NZ_JHYD.. - Region 1 - cyclic-lactone-autoinducer

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Location: 18,940 - 39,533 nt. (total: 20,594 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001743.1	0.16	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0000620.1	0.16	RiPP	lacticin Q	Lactococcus lactis
BGC0001222.1	0.15	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.15	RiPP	gassericin A	Lactobacillus gasseri
BGC0000522.1	0.15	RiPP	lacticin Z	Lactococcus lactis
BGC0000504.1	0.15	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000600.1	0.14	RiPP	thurincin H	Bacillus thuringiensis
BGC0000243.1	0.14	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001607.1	0.14	Other	gilvusmycin	Streptomyces sp. NRRL B-1347

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000616.1	0.47	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001743.1	0.46	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0000620.1	0.46	RiPP	lacticin Q	Lactococcus lactis
BGC0001222.1	0.46	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.46	RiPP	gassericin A	Lactobacillus gasseri
BGC0000522.1	0.46	RiPP	lacticin Z	Lactococcus lactis
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000600.1	0.44	RiPP	thurincin H	Bacillus thuringiensis
BGC0000243.1	0.44	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001607.1	0.44	Other	gilvusmycin	Streptomyces sp. NRRL B-1347

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00026_NZ_JHYD.. - Region 1 - NRPS

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Location: 41,446 - 85,792 nt. (total: 44,347 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

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other genes

resistance

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Gene details

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001399.1	0.31	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001686.1	0.24	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0000308.1	0.23	NRP	aureusimine	Staphylococcus aureus subsp. aureus str. JKD6008
BGC0001479.1	0.22	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0000427.1	0.22	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001131.1	0.22	NRP	ambactin	Xenorhabdus miraniensis
BGC0001615.1	0.21	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0001844.1	0.21	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001833.1	0.21	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001128.1	0.21	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001399.1	0.64	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001686.1	0.58	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0000308.1	0.56	NRP	aureusimine	Staphylococcus aureus subsp. aureus str. JKD6008
BGC0001479.1	0.55	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0000427.1	0.55	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001131.1	0.54	NRP	ambactin	Xenorhabdus miraniensis
BGC0001615.1	0.54	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0001844.1	0.54	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001833.1	0.53	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001128.1	0.53	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1

Similar known gene clusters

No matches found.

Module view

Legend

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 41445 - 85792:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg26_56

Search NORINE for peptide: strict or relaxed

AMP-binding (874..1272): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DacYFGGiVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

c00030_NZ_JHYD.. - Region 1 - betalactone

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Location: 1 - 20,690 nt. (total: 20,690 nt) Show pHMM detection rules used

Region on contig edge.

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000904.1	0.23	Other	FR-900098	Streptomyces rubellomurinus
BGC0001323.1	0.18	Terpene	monoterpenes-diterpenes	Solanum pennellii
BGC0001664.1	0.18	Terpene	merosterol	Scytonema sp. PCC 10023
BGC0001636.1	0.15	NRP	KK-1	Curvularia clavata
BGC0001774.1	0.15	Other	spicamycin	Streptomyces fimbriatus
BGC0000673.1	0.15	Terpene	pimara-8(14),15-diene	Aspergillus nidulans FGSC A4
BGC0000196.1	0.15	Polyketide	AQ-256, AQ-270a, AQ-284a	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001411.1	0.14	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0001321.1	0.14	Terpene	monoterpenes-diterpenes	Solanum habrochaites
BGC0000913.1	0.14	Other	MK-8	Enterobacter cloacae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000904.1	0.56	Other	FR-900098	Streptomyces rubellomurinus
BGC0001323.1	0.50	Terpene	monoterpenes-diterpenes	Solanum pennellii
BGC0001664.1	0.50	Terpene	merosterol	Scytonema sp. PCC 10023
BGC0001636.1	0.45	NRP	KK-1	Curvularia clavata
BGC0001774.1	0.44	Other	spicamycin	Streptomyces fimbriatus
BGC0000673.1	0.44	Terpene	pimara-8(14),15-diene	Aspergillus nidulans FGSC A4
BGC0000196.1	0.44	Polyketide	AQ-256, AQ-270a, AQ-284a	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001411.1	0.43	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0001321.1	0.43	Terpene	monoterpenes-diterpenes	Solanum habrochaites
BGC0000913.1	0.43	Other	MK-8	Enterobacter cloacae

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00033_NZ_JHYD.. - Region 1 - NRPS,transAT-PKS-like

Download region GenBank file

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Location: 14,074 - 55,758 nt. (total: 41,685 nt) Show pHMM detection rules used

Region on contig edge.

transAT-PKS-like: cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS) and not PKS_AT)
NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

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Gene details

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001135.1	0.61	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001128.1	0.60	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001132.1	0.59	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001767.1	0.58	NRP	salinichelins	Salinispora pacifica CNY331
BGC0001050.1	0.58	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0001833.1	0.57	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0000979.1	0.56	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E9
BGC0000980.1	0.56	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 22D11
BGC0001479.1	0.56	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0000389.1	0.56	NRP	massetolide A	Pseudomonas fluorescens SS101

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001135.1	0.64	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001128.1	0.63	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001132.1	0.63	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001767.1	0.63	NRP	salinichelins	Salinispora pacifica CNY331
BGC0001050.1	0.62	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0001833.1	0.62	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0000979.1	0.61	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E9
BGC0000980.1	0.61	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 22D11
BGC0001479.1	0.61	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0000389.1	0.61	NRP	massetolide A	Pseudomonas fluorescens SS101

Similar known gene clusters

No matches found.

Module view

Legend

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 14073 - 55758:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn - X - tyr - ser) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 19635 - 55758:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn - X - tyr - ser) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg33_29

Search NORINE for peptide: strict or relaxed

AMP-binding (275..670): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (1309..1707): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: vAWeItAddK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 50% (weak)

AMP-binding (2348..2743): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DGTITAEVAK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 100% (strong)

AMP-binding (3389..3799): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

c00051_NZ_JHYD.. - Region 1 - NRPS

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Location: 1 - 16,139 nt. (total: 16,139 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001050.1	0.38	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0000427.1	0.36	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0000389.1	0.35	NRP	massetolide A	Pseudomonas fluorescens SS101
BGC0000426.1	0.35	NRP	sevadicin	Paenibacillus larvae
BGC0000901.1	0.33	Other	ferrichrome	Aspergillus niger
BGC0001261.1	0.33	NRP	AM-toxin	Alternaria alternata
BGC0000900.1	0.31	Other	ferrichrome	Aspergillus oryzae
BGC0001132.1	0.29	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001479.1	0.29	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001135.1	0.28	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001050.1	0.70	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0000427.1	0.69	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0000389.1	0.68	NRP	massetolide A	Pseudomonas fluorescens SS101
BGC0000426.1	0.68	NRP	sevadicin	Paenibacillus larvae
BGC0000901.1	0.67	Other	ferrichrome	Aspergillus niger
BGC0001261.1	0.66	NRP	AM-toxin	Alternaria alternata
BGC0000900.1	0.64	Other	ferrichrome	Aspergillus oryzae
BGC0001132.1	0.63	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001479.1	0.62	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001135.1	0.62	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis

Similar known gene clusters

Module view

Legend

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 16139:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser - ser) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg51_1

Search NORINE for peptide: strict or relaxed

AMP-binding (13..419): X

NRPSPredictor2: pro, pip

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DArHLaLmvK
Nearest Stachelhaus code:: hpg
Stachelhaus code match:: 60% (weak)

ctg51_4

Search NORINE for peptide: strict or relaxed

AMP-binding (472..875): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

AMP-binding (1515..1919): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFSLVeK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 90% (moderate)

c00060_NZ_JHYD.. - Region 1 - NRPS

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Location: 1 - 4,656 nt. (total: 4,656 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000427.1	0.23	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001479.1	0.23	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001758.1	0.22	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001833.1	0.22	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001641.1	0.22	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001135.1	0.21	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001873.1	0.21	NRP	pyrrolizixenamide A	Xenorhabdus szentirmaii DSM 16338
BGC0001825.1	0.21	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001132.1	0.21	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001615.1	0.21	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000427.1	0.56	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001479.1	0.56	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001758.1	0.55	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001833.1	0.55	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001641.1	0.54	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001135.1	0.54	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001873.1	0.54	NRP	pyrrolizixenamide A	Xenorhabdus szentirmaii DSM 16338
BGC0001825.1	0.54	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001132.1	0.54	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001615.1	0.54	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00067_NZ_JHYD.. - Region 1 - NRPS

Download region GenBank file

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Location: 1 - 2,215 nt. (total: 2,215 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001641.1	0.22	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001758.1	0.22	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001135.1	0.22	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001479.1	0.22	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001844.1	0.22	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001833.1	0.22	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001132.1	0.22	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001128.1	0.22	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001825.1	0.22	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0000307.1	0.21	NRP	AbT1	Aureobasidium pullulans

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001641.1	0.55	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001758.1	0.55	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001135.1	0.55	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001479.1	0.55	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001844.1	0.55	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001833.1	0.55	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001132.1	0.55	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001128.1	0.55	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001825.1	0.55	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0000307.1	0.53	NRP	AbT1	Aureobasidium pullulans

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

c00068_NZ_JHYD.. - Region 1 - NRPS

Download region GenBank file

Download region SVG

Location: 1 - 1,880 nt. (total: 1,880 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000900.1	0.32	Other	ferrichrome	Aspergillus oryzae
BGC0001249.1	0.31	NRP	dimethylcoprogen	Alternaria alternata
BGC0001479.1	0.29	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0000427.1	0.29	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001132.1	0.26	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0000375.1	0.25	NRP	indigoidine	Streptomyces chromofuscus
BGC0001135.1	0.25	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001128.1	0.25	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0000348.1	0.24	NRP	ergovaline	Epichloe festucae var. lolii
BGC0001261.1	0.24	NRP	AM-toxin	Alternaria alternata

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000900.1	0.65	Other	ferrichrome	Aspergillus oryzae
BGC0001249.1	0.65	NRP	dimethylcoprogen	Alternaria alternata
BGC0001479.1	0.63	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0000427.1	0.63	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001132.1	0.59	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0000375.1	0.59	NRP	indigoidine	Streptomyces chromofuscus
BGC0001135.1	0.59	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001128.1	0.58	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0000348.1	0.57	NRP	ergovaline	Epichloe festucae var. lolii
BGC0001261.1	0.57	NRP	AM-toxin	Alternaria alternata

Similar known gene clusters

No matches found.

Module view

Legend

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 1880:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (leu)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg68_1

Search NORINE for peptide: strict or relaxed

AMP-binding (0..378): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DpALIGdVcK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 70% (weak)