GCF_902362795.1_MGYG-HGUT-00062_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00001_NZ_CABI.. (original name was: NZ_CABIXZ010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RRE-containing	1,596,097	1,623,811

c00003_NZ_CABI.. (original name was: NZ_CABIXZ010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	49,321	67,397	exopolysaccharide	Saccharide	10%
Region 3.2	ranthipeptide	134,756	160,500

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RRE-containing	1,596,097	1,623,811
Region 3.1	RRE-containing	49,321	67,397	exopolysaccharide	Saccharide	10%
Region 3.2	ranthipeptide	134,756	160,500

No secondary metabolite regions were found in these records:: c00002_NZ_CABI.. (original name was: NZ_CABIXZ010000002.1); c00004_NZ_CABI.. (original name was: NZ_CABIXZ010000004.1); c00005_NZ_CABI.. (original name was: NZ_CABIXZ010000005.1); c00006_NZ_CABI.. (original name was: NZ_CABIXZ010000006.1); c00007_NZ_CABI.. (original name was: NZ_CABIXZ010000007.1); c00008_NZ_CABI.. (original name was: NZ_CABIXZ010000008.1); c00009_NZ_CABI.. (original name was: NZ_CABIXZ010000009.1); c00010_NZ_CABI.. (original name was: NZ_CABIXZ010000010.1); c00011_NZ_CABI.. (original name was: NZ_CABIXZ010000011.1); c00012_NZ_CABI.. (original name was: NZ_CABIXZ010000012.1); c00013_NZ_CABI.. (original name was: NZ_CABIXZ010000013.1); c00014_NZ_CABI.. (original name was: NZ_CABIXZ010000014.1); c00015_NZ_CABI.. (original name was: NZ_CABIXZ010000015.1); c00016_NZ_CABI.. (original name was: NZ_CABIXZ010000016.1); c00017_NZ_CABI.. (original name was: NZ_CABIXZ010000017.1)

Compact view

c00001_NZ_CABI.. - Region 1 - RRE-containing

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Location: 1,596,097 - 1,623,811 nt. (total: 27,715 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001356.1	0.17	RiPP	paeninodin	Paenibacillus dendritiformis C454
BGC0001779.1	0.17	RiPP	siamycin	Streptomyces nodosus
BGC0000601.1	0.16	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0000518.1	0.16	RiPP	informatipeptin	Streptomyces viridochromogenes DSM 40736
BGC0000571.1	0.16	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0000560.1	0.15	RiPP	subtilomycin	Bacillus subtilis
BGC0001229.1	0.15	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000592.1	0.15	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0000616.1	0.15	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001496.1	0.15	RiPP	actinokineosin	Actinokineospora spheciospongiae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001356.1	0.49	RiPP	paeninodin	Paenibacillus dendritiformis C454
BGC0001779.1	0.48	RiPP	siamycin	Streptomyces nodosus
BGC0000601.1	0.47	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0000518.1	0.47	RiPP	informatipeptin	Streptomyces viridochromogenes DSM 40736
BGC0000571.1	0.46	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0000560.1	0.46	RiPP	subtilomycin	Bacillus subtilis
BGC0001229.1	0.46	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000592.1	0.46	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0000616.1	0.45	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001496.1	0.45	RiPP	actinokineosin	Actinokineospora spheciospongiae

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00003_NZ_CABI.. - Region 1 - RRE-containing

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Location: 49,321 - 67,397 nt. (total: 18,077 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000813.1	0.17	Alkaloid	K-252a	Nonomuraea longicatena
BGC0000699.1	0.17	Saccharide	hygromycin A	Streptomyces hygroscopicus subsp. hygroscopicus
BGC0000724.1	0.17	Saccharide	streptomycin	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000807.1	0.17	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0001222.1	0.16	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.16	RiPP	gassericin A	Lactobacillus gasseri
BGC0000825.1	0.16	Alkaloid	staurosporine	Streptomyces sp. TP-A0274
BGC0000716.1	0.16	Saccharide	spectinomycin	Streptomyces netropsis
BGC0000827.1	0.16	Alkaloid	staurosporine	Salinispora arenicola CNS-205
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000813.1	0.49	Alkaloid	K-252a	Nonomuraea longicatena
BGC0000699.1	0.48	Saccharide	hygromycin A	Streptomyces hygroscopicus subsp. hygroscopicus
BGC0000724.1	0.48	Saccharide	streptomycin	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000807.1	0.47	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0001222.1	0.47	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.47	RiPP	gassericin A	Lactobacillus gasseri
BGC0000825.1	0.46	Alkaloid	staurosporine	Streptomyces sp. TP-A0274
BGC0000716.1	0.46	Saccharide	spectinomycin	Streptomyces netropsis
BGC0000827.1	0.46	Alkaloid	staurosporine	Salinispora arenicola CNS-205
BGC0000616.1	0.46	RiPP	amylocyclicin	Bacillus velezensis FZB42

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00003_NZ_CABI.. - Region 2 - ranthipeptide

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Location: 134,756 - 160,500 nt. (total: 25,745 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.18	Other	nucleocidin	Streptomyces calvus
BGC0001391.1	0.16	RiPP	thusin	Bacillus thuringiensis serovar rongseni
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000541.1	0.16	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0000517.1	0.16	RiPP	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0001311.1	0.16	RiPP	flavecins	Ruminococcus flavefaciens FD-1
BGC0001494.1	0.16	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0000560.1	0.16	RiPP	subtilomycin	Bacillus subtilis
BGC0001210.1	0.16	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.49	Other	nucleocidin	Streptomyces calvus
BGC0001391.1	0.47	RiPP	thusin	Bacillus thuringiensis serovar rongseni
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000541.1	0.47	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0000517.1	0.47	RiPP	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0001311.1	0.47	RiPP	flavecins	Ruminococcus flavefaciens FD-1
BGC0001494.1	0.47	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0000560.1	0.47	RiPP	subtilomycin	Bacillus subtilis
BGC0001210.1	0.46	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names