GCF_000612865.1_PRJEB5522_assembly_1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CCAX010000001 (original name was: NZ_CCAX010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	480,968	519,431
Region 1.2	betalactone	520,762	544,903	fengycin	NRP	46%
Region 1.3	ectoine	875,429	885,815	ectoine	Other	75%
Region 1.4	T3PKS,terpene	943,589	1,000,416	chejuenolide A / chejuenolide B	Polyketide	7%

NZ_CCAX010000002 (original name was: NZ_CCAX010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	terpene	144,319	165,137

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	480,968	519,431
Region 1.2	betalactone	520,762	544,903	fengycin	NRP	46%
Region 1.3	ectoine	875,429	885,815	ectoine	Other	75%
Region 1.4	T3PKS,terpene	943,589	1,000,416	chejuenolide A / chejuenolide B	Polyketide	7%
Region 2.1	terpene	144,319	165,137

No secondary metabolite regions were found in these records:: NZ_CCAX010000003 (original name was: NZ_CCAX010000003.1); NZ_CCAX010000004 (original name was: NZ_CCAX010000004.1); NZ_CCAX010000005 (original name was: NZ_CCAX010000005.1)

Compact view

c00001_NZ_CCAX.. - Region 1 - T3PKS

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Location: 480,968 - 519,431 nt. (total: 38,464 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

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NRPS/PKS domains

MIBiG comparison

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Pfam domains

TIGRFAM domains

Detailed domain annotation

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000282.1	0.35	Polyketide	alkylresorcinol	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001454.1	0.31	Other	germicidin	Streptomyces argillaceus
BGC0001962.1	0.31	Polyketide	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0001831.1	0.22	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0001156.1	0.20	Terpene	platencin	Streptomyces platensis
BGC0001140.1	0.20	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0000905.1	0.20	Other	heme D1	Heliobacillus mobilis
BGC0000896.1	0.17	Other	cycloserine	Streptomyces lavendulae subsp. lavendulae
BGC0000774.1	0.15	Saccharide	lipopolysaccharide	Xanthomonas campestris pv. campestris
BGC0001587.1	0.14	Other	ethylenediaminesuccinic acid hydroxyarginine (EDHA)	Streptomyces avermitilis MA-4680 = NBRC 14893

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000282.1	0.68	Polyketide	alkylresorcinol	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001454.1	0.65	Other	germicidin	Streptomyces argillaceus
BGC0001962.1	0.64	Polyketide	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0001831.1	0.55	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0001156.1	0.52	Terpene	platencin	Streptomyces platensis
BGC0001140.1	0.52	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0000905.1	0.52	Other	heme D1	Heliobacillus mobilis
BGC0000896.1	0.48	Other	cycloserine	Streptomyces lavendulae subsp. lavendulae
BGC0000774.1	0.46	Saccharide	lipopolysaccharide	Xanthomonas campestris pv. campestris
BGC0001587.1	0.44	Other	ethylenediaminesuccinic acid hydroxyarginine (EDHA)	Streptomyces avermitilis MA-4680 = NBRC 14893

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00001_NZ_CCAX.. - Region 2 - betalactone

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Location: 520,762 - 544,903 nt. (total: 24,142 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000234.1	0.20	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001465.1	0.20	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0000890.1	0.20	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0000891.1	0.20	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas luteoviolacea 2ta16
BGC0001897.1	0.18	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000938.1	0.18	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000768.1	0.16	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0002034.1	0.16	Other	perquinoline A, perquinoline B, perquinoline C	Streptomyces sp. IB2014 016-6

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000234.1	0.53	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001465.1	0.53	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0000890.1	0.52	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0000891.1	0.52	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas luteoviolacea 2ta16
BGC0001897.1	0.49	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000938.1	0.49	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0000500.1	0.47	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000768.1	0.47	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0002034.1	0.47	Other	perquinoline A, perquinoline B, perquinoline C	Streptomyces sp. IB2014 016-6

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00001_NZ_CCAX.. - Region 3 - ectoine

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Location: 875,429 - 885,815 nt. (total: 10,387 nt) Show pHMM detection rules used

ectoine: ectoine_synt

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000855.1	0.41	Other	ectoine	Methylomicrobium kenyense
BGC0000858.1	0.41	Other	ectoine	Methylobacter marinus
BGC0000852.1	0.40	Other	ectoine	Sporosarcina pasteurii
BGC0000859.1	0.33	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000856.1	0.33	Other	ectoine	Methylophaga thalassica
BGC0000853.1	0.32	Other	ectoine	Streptomyces anulatus
BGC0000860.1	0.31	Other	ectoine	Methylarcula marina
BGC0000857.1	0.27	Other	ectoine	Methylophaga alcalica
BGC0000854.1	0.25	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0000895.1	0.14	Other	citrulline	Lactobacillus plantarum subsp. plantarum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000855.1	0.73	Other	ectoine	Methylomicrobium kenyense
BGC0000858.1	0.73	Other	ectoine	Methylobacter marinus
BGC0000852.1	0.72	Other	ectoine	Sporosarcina pasteurii
BGC0000859.1	0.66	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000856.1	0.66	Other	ectoine	Methylophaga thalassica
BGC0000853.1	0.66	Other	ectoine	Streptomyces anulatus
BGC0000860.1	0.64	Other	ectoine	Methylarcula marina
BGC0000857.1	0.60	Other	ectoine	Methylophaga alcalica
BGC0000854.1	0.59	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0000895.1	0.43	Other	citrulline	Lactobacillus plantarum subsp. plantarum

Similar known gene clusters

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Detailed TIGRFAM domain annotation

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c00001_NZ_CCAX.. - Region 4 - T3PKS,terpene

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Location: 943,589 - 1,000,416 nt. (total: 56,828 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.45	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0001948.1	0.33	Other	naseseazine C, C3-aryl pyrroloindolines	Streptomyces sp.
BGC0001927.1	0.30	Other	A-94964	Streptomyces sp.
BGC0000666.1	0.28	Terpene	xiamycin A	Streptomyces sp. SCSIO 02999
BGC0000207.1	0.26	Polyketide	chartreusin	Streptomyces chartreusis
BGC0001302.1	0.26	Other	lomofungin	Streptomyces lomondensis
BGC0001440.1	0.25	Other	cystargolide A, cystargolide B	Kitasatospora cystarginea
BGC0001964.1	0.25	Polyketide	alkylpyrone-407, alkylpyrone-393	Cystobacterineae bacterium
BGC0000648.1	0.25	Terpene	carotenoid	Myxococcus xanthus
BGC0000219.1	0.23	Polyketide, Saccharide	elloramycin	Streptomyces olivaceus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.76	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.58	Terpene	carotenoid	Myxococcus xanthus
BGC0000634.1	0.58	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.58	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000656.1	0.57	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000640.1	0.57	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000664.1	0.57	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.1	0.57	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000633.1	0.57	Terpene	carotenoid	Streptomyces avermitilis
BGC0001227.1	0.56	Terpene	isorenieratene	Streptomyces collinus Tu 365

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00002_NZ_CCAX.. - Region 1 - terpene

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Location: 144,319 - 165,137 nt. (total: 20,819 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001839.1	0.31	Terpene	squalestatin S1	Aspergillus sp. Z5
BGC0000895.1	0.16	Other	citrulline	Lactobacillus plantarum subsp. plantarum
BGC0000766.1	0.14	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000883.1	0.14	Other	arginomycin	Streptomyces arginensis
BGC0000430.1	0.11	NRP, Polyketide	spumigin E	Nodularia spumigena CCY9414
BGC0001940.1	0.11	Polyketide	pyxidicycline A, pyxidicycline B	Pyxidicoccus fallax
BGC0000343.1	0.10	NRP	enterobactin	Pseudomonas sp. J465
BGC0000926.1	0.10	Other	rhizocticin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001449.1	0.10	NRP, Polyketide, Alkaloid	ucs1025a	Thermothelomyces thermophilus
BGC0000433.1	0.10	NRP	surfactin	Bacillus velezensis FZB42

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001839.1	0.65	Terpene	squalestatin S1	Aspergillus sp. Z5
BGC0000895.1	0.47	Other	citrulline	Lactobacillus plantarum subsp. plantarum
BGC0000766.1	0.43	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000883.1	0.43	Other	arginomycin	Streptomyces arginensis
BGC0000430.1	0.38	NRP, Polyketide	spumigin E	Nodularia spumigena CCY9414
BGC0001940.1	0.38	Polyketide	pyxidicycline A, pyxidicycline B	Pyxidicoccus fallax
BGC0000343.1	0.36	NRP	enterobactin	Pseudomonas sp. J465
BGC0000926.1	0.36	Other	rhizocticin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001449.1	0.36	NRP, Polyketide, Alkaloid	ucs1025a	Thermothelomyces thermophilus
BGC0000433.1	0.35	NRP	surfactin	Bacillus velezensis FZB42

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

Selected features only

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