GCF_002208805.2_ASM220880v2_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP022096.2

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	cyclic-lactone-autoinducer	854,773	875,482
Region 2	siderophore	1,020,313	1,033,518	staphyloferrin A	Other:Non-NRP siderophore	50%
Region 3	T3PKS	1,363,947	1,405,113
Region 4	terpene	1,715,069	1,735,923
Region 5	siderophore	1,741,851	1,755,122

NZ_CP022096.2 - Region 1 - cyclic-lactone-autoinducer

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Location: 854,773 - 875,482 nt. (total: 20,710 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.18	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000207.1	0.13	Polyketide	chartreusin	Streptomyces chartreusis
BGC0000540.1	0.12	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0001364.1	0.11	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919
BGC0001687.1	0.09	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0001053.1	0.07	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0001872.1	0.07	Polyketide	fabclavine-polyamine	Xenorhabdus bovienii SS-2004
BGC0001836.1	0.06	Polyketide	tartrolon D, tartrolon F, tartrolon G	Gynuella sunshinyii YC6258
BGC0001130.1	0.06	NRP, Polyketide	fabclavine Ia	Xenorhabdus budapestensis
BGC0001812.1	0.05	Polyketide	tylactone	Micromonospora chalcea subsp. izumensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.49	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000207.1	0.42	Polyketide	chartreusin	Streptomyces chartreusis
BGC0000540.1	0.40	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0001364.1	0.37	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919
BGC0001687.1	0.34	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0001053.1	0.29	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0001872.1	0.29	Polyketide	fabclavine-polyamine	Xenorhabdus bovienii SS-2004
BGC0001836.1	0.27	Polyketide	tartrolon D, tartrolon F, tartrolon G	Gynuella sunshinyii YC6258
BGC0001130.1	0.25	NRP, Polyketide	fabclavine Ia	Xenorhabdus budapestensis
BGC0001812.1	0.24	Polyketide	tylactone	Micromonospora chalcea subsp. izumensis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP022096.2 - Region 2 - siderophore

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Location: 1,020,313 - 1,033,518 nt. (total: 13,206 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.29	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000883.1	0.17	Other	arginomycin	Streptomyces arginensis
BGC0001783.1	0.14	Other	streptonigrin	Streptomyces flocculus
BGC0001850.1	0.14	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001
BGC0000024.1	0.06	Polyketide	aureothin	Streptomyces thioluteus
BGC0000179.1	0.04	Polyketide	etnangien	Sorangium cellulosum So ce56
BGC0001386.1	0.04	Polyketide	JBIR-76, JBIR-77	Streptomyces sp. RI-77
BGC0001622.1	0.04	Polyketide	isatropolone A, isotropolone B, isotropolone C	Streptomyces sp.
BGC0000343.1	0.04	NRP	enterobactin	Pseudomonas sp. J465
BGC0000088.1	0.04	Polyketide	monacolin K	Aspergillus terreus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.62	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000883.1	0.49	Other	arginomycin	Streptomyces arginensis
BGC0001783.1	0.44	Other	streptonigrin	Streptomyces flocculus
BGC0001850.1	0.43	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001
BGC0000024.1	0.25	Polyketide	aureothin	Streptomyces thioluteus
BGC0000179.1	0.20	Polyketide	etnangien	Sorangium cellulosum So ce56
BGC0001386.1	0.20	Polyketide	JBIR-76, JBIR-77	Streptomyces sp. RI-77
BGC0001622.1	0.19	Polyketide	isatropolone A, isotropolone B, isotropolone C	Streptomyces sp.
BGC0000343.1	0.19	NRP	enterobactin	Pseudomonas sp. J465
BGC0000088.1	0.19	Polyketide	monacolin K	Aspergillus terreus

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP022096.2 - Region 3 - T3PKS

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Location: 1,363,947 - 1,405,113 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.22	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000770.1	0.18	Saccharide	lipo-oligosaccharide	Campylobacter jejuni
BGC0000509.1	0.18	RiPP	epilancin 15x	Staphylococcus epidermidis
BGC0000867.1	0.17	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.17	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000218.1	0.17	Polyketide	doxorubicin	Streptomyces peucetius
BGC0001739.1	0.16	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0001104.1	0.16	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000784.1	0.16	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000205.1	0.16	Polyketide	bryostatin	Candidatus Endobugula sertula

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.55	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000770.1	0.50	Saccharide	lipo-oligosaccharide	Campylobacter jejuni
BGC0000509.1	0.49	RiPP	epilancin 15x	Staphylococcus epidermidis
BGC0000867.1	0.49	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.48	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000218.1	0.48	Polyketide	doxorubicin	Streptomyces peucetius
BGC0001739.1	0.47	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0001104.1	0.47	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000784.1	0.47	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000205.1	0.46	Polyketide	bryostatin	Candidatus Endobugula sertula

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP022096.2 - Region 4 - terpene

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Location: 1,715,069 - 1,735,923 nt. (total: 20,855 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.45	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000888.1	0.28	Other	bacilysin	Bacillus sp. CS93
BGC0000644.1	0.25	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000650.1	0.25	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0001184.1	0.24	Other	bacilysin	Bacillus velezensis FZB42
BGC0000645.1	0.23	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000637.1	0.23	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000648.1	0.21	Terpene	carotenoid	Myxococcus xanthus
BGC0000643.1	0.21	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000634.1	0.21	Terpene	carotenoid	Brevundimonas sp. SD212

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.76	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000888.1	0.61	Other	bacilysin	Bacillus sp. CS93
BGC0000644.1	0.59	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000650.1	0.59	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0001184.1	0.58	Other	bacilysin	Bacillus velezensis FZB42
BGC0000645.1	0.56	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000637.1	0.56	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000648.1	0.54	Terpene	carotenoid	Myxococcus xanthus
BGC0000643.1	0.54	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000634.1	0.54	Terpene	carotenoid	Brevundimonas sp. SD212

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP022096.2 - Region 5 - siderophore

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Location: 1,741,851 - 1,755,122 nt. (total: 13,272 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000946.1	0.35	Other	vibrioferrin	Vibrio parahaemolyticus
BGC0000947.1	0.30	Other	vibrioferrin	Vibrio alginolyticus
BGC0001870.1	0.28	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000944.1	0.22	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000943.1	0.15	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000703.1	0.14	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001767.1	0.09	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000349.1	0.08	NRP	erythrochelin	Saccharopolyspora erythraea NRRL 2338
BGC0001211.1	0.08	NRP	albachelin	Amycolatopsis alba DSM 44262
BGC0000708.1	0.08	Saccharide	lividomycin	Streptomyces lividus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000946.1	0.68	Other	vibrioferrin	Vibrio parahaemolyticus
BGC0000947.1	0.64	Other	vibrioferrin	Vibrio alginolyticus
BGC0001870.1	0.62	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000944.1	0.55	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000943.1	0.44	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000703.1	0.42	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001767.1	0.33	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000349.1	0.32	NRP	erythrochelin	Saccharopolyspora erythraea NRRL 2338
BGC0001211.1	0.32	NRP	albachelin	Amycolatopsis alba DSM 44262
BGC0000708.1	0.31	Saccharide	lividomycin	Streptomyces lividus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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