GCF_003343305.1_ASM334330v1_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP030932.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	cyclic-lactone-autoinducer	861,028	881,600
Region 1.2	terpene	984,654	1,005,538

NZ_CP030933.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	cyclic-lactone-autoinducer	433,040	453,766

Region	Type	From	To	Similarity
Region 1.1	cyclic-lactone-autoinducer	861,028	881,600
Region 1.2	terpene	984,654	1,005,538
Region 2.1	cyclic-lactone-autoinducer	433,040	453,766

No secondary metabolite regions were found in these records:: NZ_CP030934.1; NZ_CP030935.1

Compact view

NZ_CP030932.1 - Region 1 - cyclic-lactone-autoinducer

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Location: 861,028 - 881,600 nt. (total: 20,573 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.13	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000486.1	0.09	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000494.1	0.09	RiPP	uberolysin	Streptococcus uberis
BGC0001388.1	0.06	RiPP	gassericin E	Lactobacillus gasseri

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.41	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000486.1	0.33	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000494.1	0.32	RiPP	uberolysin	Streptococcus uberis
BGC0001388.1	0.26	RiPP	gassericin E	Lactobacillus gasseri

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP030932.1 - Region 2 - terpene

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Location: 984,654 - 1,005,538 nt. (total: 20,885 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.46	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.23	Terpene	carotenoid	Myxococcus xanthus
BGC0000643.1	0.21	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000634.1	0.21	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000646.1	0.19	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.19	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000640.1	0.19	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.1	0.18	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000638.1	0.18	Terpene	carotenoid	Pantoea ananatis
BGC0000642.1	0.18	Terpene	carotenoid	Enterobacteriaceae bacterium DC413

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.76	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.56	Terpene	carotenoid	Myxococcus xanthus
BGC0000643.1	0.54	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000634.1	0.54	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000646.1	0.51	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.51	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000640.1	0.50	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.1	0.50	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000638.1	0.50	Terpene	carotenoid	Pantoea ananatis
BGC0000642.1	0.50	Terpene	carotenoid	Enterobacteriaceae bacterium DC413

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP030933.1 - Region 1 - cyclic-lactone-autoinducer

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Location: 433,040 - 453,766 nt. (total: 20,727 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.18	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0001484.1	0.14	Other	2'-chloropentostatin, 2'-amino-2'-deoxyadenosine	Actinomadura sp. ATCC 39365
BGC0000776.1	0.13	Saccharide	lipopolysaccharide	Escherichia coli
BGC0000793.1	0.13	Saccharide	lipopolysaccharide oligosaccharide	Salmonella enterica subsp. arizonae
BGC0001985.1	0.13	Other	pyrazomycin	Streptomyces candidus
BGC0000804.1	0.13	Saccharide	acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03	Streptomyces coelicoflavus ZG0656
BGC0000540.1	0.13	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0000691.1	0.06	Saccharide	acarbose	Actinoplanes sp. SE50/110

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.49	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0001484.1	0.43	Other	2'-chloropentostatin, 2'-amino-2'-deoxyadenosine	Actinomadura sp. ATCC 39365
BGC0000776.1	0.42	Saccharide	lipopolysaccharide	Escherichia coli
BGC0000793.1	0.42	Saccharide	lipopolysaccharide oligosaccharide	Salmonella enterica subsp. arizonae
BGC0001985.1	0.42	Other	pyrazomycin	Streptomyces candidus
BGC0000804.1	0.41	Saccharide	acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03	Streptomyces coelicoflavus ZG0656
BGC0000540.1	0.41	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0000691.1	0.25	Saccharide	acarbose	Actinoplanes sp. SE50/110

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names