GCF_000820765.1_Arquibacterium_massiliensis_AP7_genomic - 2 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 29.1	cyclic-lactone-autoinducer	248,544	269,314

Region

Type

From

Most similar known cluster

Similarity

Region 29.1

cyclic-lactone-autoinducer

248,544

269,314

Region	Type	From	To	Most similar known cluster	Similarity
Region 36.1	ranthipeptide	189,983	203,691

Region

Type

From

Most similar known cluster

Similarity

Region 36.1

ranthipeptide

189,983

203,691

Region	Type	From	To	Most similar known cluster	Similarity
Region 29.1	cyclic-lactone-autoinducer	248,544	269,314
Region 36.1	ranthipeptide	189,983	203,691

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.15	Polyketide	chartreusin	Streptomyces chartreusis
BGC0000877.1	0.09	Other	polyoxin A, polyoxin H	Streptomyces cacaoi subsp. asoensis
BGC0000259.1	0.09	Polyketide	prodigiosin	Serratia marcescens
BGC0000813.1	0.07	Alkaloid	K-252a	Nonomuraea longicatena
BGC0000969.1	0.07	NRP, Polyketide	chondramide A	Chondromyces crocatus
BGC0001212.1	0.06	NRP, Polyketide	nannocystin a	Nannocystis sp. MB1016
BGC0000283.1	0.05	Other (Cyclitol)	cetoniacytone A	Actinomyces sp. Lu 9419
BGC0001110.1	0.05	NRP, Polyketide	psymberin, irciniastatin B	uncultured bacterium psy1
BGC0000814.1	0.05	Alkaloid	K-252a	Nonomuraea longicatena
BGC0001662.1	0.05	Polyketide	mediomycin A	Kitasatospora mediocidica

Reference

cyclic-lactone-autoinducer

Similarity score

Type

Compound(s)

Organism

BGC0000207.1

0.15

Polyketide

chartreusin

Streptomyces chartreusis

BGC0000877.1

0.09

Other

polyoxin A, polyoxin H

Streptomyces cacaoi subsp. asoensis

BGC0000259.1

0.09

Polyketide

prodigiosin

Serratia marcescens

BGC0000813.1

0.07

Alkaloid

K-252a

Nonomuraea longicatena

BGC0000969.1

0.07

NRP, Polyketide

chondramide A

Chondromyces crocatus

BGC0001212.1

0.06

NRP, Polyketide

nannocystin a

Nannocystis sp. MB1016

BGC0000283.1

0.05

Other (Cyclitol)

cetoniacytone A

Actinomyces sp. Lu 9419

BGC0001110.1

0.05

NRP, Polyketide

psymberin, irciniastatin B

uncultured bacterium psy1

BGC0000814.1

0.05

Alkaloid

K-252a

Nonomuraea longicatena

BGC0001662.1

0.05

Polyketide

mediomycin A

Kitasatospora mediocidica

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.45	Polyketide	chartreusin	Streptomyces chartreusis
BGC0000877.1	0.34	Other	polyoxin A, polyoxin H	Streptomyces cacaoi subsp. asoensis
BGC0000259.1	0.34	Polyketide	prodigiosin	Serratia marcescens
BGC0000813.1	0.29	Alkaloid	K-252a	Nonomuraea longicatena
BGC0000969.1	0.28	NRP, Polyketide	chondramide A	Chondromyces crocatus
BGC0001212.1	0.25	NRP, Polyketide	nannocystin a	Nannocystis sp. MB1016
BGC0000283.1	0.23	Other (Cyclitol)	cetoniacytone A	Actinomyces sp. Lu 9419
BGC0001110.1	0.22	NRP, Polyketide	psymberin, irciniastatin B	uncultured bacterium psy1
BGC0000814.1	0.22	Alkaloid	K-252a	Nonomuraea longicatena
BGC0001662.1	0.22	Polyketide	mediomycin A	Kitasatospora mediocidica

Reference

Aggregated

Similarity score

Type

Compound(s)

Organism

BGC0000207.1

0.45

Polyketide

chartreusin

Streptomyces chartreusis

BGC0000877.1

0.34

Other

polyoxin A, polyoxin H

Streptomyces cacaoi subsp. asoensis

BGC0000259.1

0.34

Polyketide

prodigiosin

Serratia marcescens

BGC0000813.1

0.29

Alkaloid

K-252a

Nonomuraea longicatena

BGC0000969.1

0.28

NRP, Polyketide

chondramide A

Chondromyces crocatus

BGC0001212.1

0.25

NRP, Polyketide

nannocystin a

Nannocystis sp. MB1016

BGC0000283.1

0.23

Other (Cyclitol)

cetoniacytone A

Actinomyces sp. Lu 9419

BGC0001110.1

0.22

NRP, Polyketide

psymberin, irciniastatin B

uncultured bacterium psy1

BGC0000814.1

0.22

Alkaloid

K-252a

Nonomuraea longicatena

BGC0001662.1

0.22

Polyketide

mediomycin A

Kitasatospora mediocidica

c00036_NZ_CCYH.. - Region 1 - ranthipeptide

Download region GenBank file

Download region SVG

Location: 189,983 - 203,691 nt. (total: 13,709 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000599.1	0.15	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0001765.1	0.13	Saccharide	salecan	Agrobacterium tumefaciens
BGC0001380.1	0.13	Saccharide	salecan	Agrobacterium sp. ZX09
BGC0000695.1	0.10	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0002026.1	0.09	NRP	thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2	Jahnella sp. MSr9139
BGC0002007.1	0.06	Terpene	atolypene A, atolypene B	Amycolatopsis tolypomycina
BGC0000997.1	0.05	NRP, Polyketide	glidobactin	[Polyangium] brachysporum
BGC0000344.1	0.05	NRP	entolysin	Pseudomonas entomophila L48
BGC0000080.1	0.04	Polyketide	jerangolid A, jerangolid D	Sorangium cellulosum
BGC0001603.1	0.04	Saccharide	gentamicin	Micromonospora echinospora

Reference

ranthipeptide

Similarity score

Type

Compound(s)

Organism

BGC0000599.1

0.15

RiPP

thuricin CD α, thuricin CD β

Bacillus thuringiensis

BGC0001765.1

0.13

Saccharide

salecan

Agrobacterium tumefaciens

BGC0001380.1

0.13

Saccharide

salecan

Agrobacterium sp. ZX09

BGC0000695.1

0.10

Saccharide

fortimicin

Micromonospora olivasterospora

BGC0002026.1

0.09

NRP

thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2

Jahnella sp. MSr9139

BGC0002007.1

0.06

Terpene

atolypene A, atolypene B

Amycolatopsis tolypomycina

BGC0000997.1

0.05

NRP, Polyketide

glidobactin

[Polyangium] brachysporum

BGC0000344.1

0.05

NRP

entolysin

Pseudomonas entomophila L48

BGC0000080.1

0.04

Polyketide

jerangolid A, jerangolid D

Sorangium cellulosum

BGC0001603.1

0.04

Saccharide

gentamicin

Micromonospora echinospora

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000599.1	0.46	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0001765.1	0.41	Saccharide	salecan	Agrobacterium tumefaciens
BGC0001380.1	0.41	Saccharide	salecan	Agrobacterium sp. ZX09
BGC0000695.1	0.34	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0002026.1	0.32	NRP	thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2	Jahnella sp. MSr9139
BGC0002007.1	0.25	Terpene	atolypene A, atolypene B	Amycolatopsis tolypomycina
BGC0000997.1	0.24	NRP, Polyketide	glidobactin	[Polyangium] brachysporum
BGC0000344.1	0.21	NRP	entolysin	Pseudomonas entomophila L48
BGC0000080.1	0.21	Polyketide	jerangolid A, jerangolid D	Sorangium cellulosum
BGC0001603.1	0.19	Saccharide	gentamicin	Micromonospora echinospora

Reference

Aggregated

Similarity score

Type

Compound(s)

Organism

BGC0000599.1

0.46

RiPP

thuricin CD α, thuricin CD β

Bacillus thuringiensis

BGC0001765.1