GCF_009935415.1_ASM993541v1_genomic - 9 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_NKAQ01000011 (original name was: NZ_NKAQ01000011.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	terpene	205,233	227,101

NZ_NKAQ01000002 (original name was: NZ_NKAQ01000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RRE-containing	386,063	406,329
Region 12.2	phosphonate	631,905	673,422
Region 12.3	terpene	782,204	803,052	carotenoid	Terpene	50%

NZ_NKAQ01000020 (original name was: NZ_NKAQ01000020.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	NRPS-like	1	23,293	2,4-diacetylphloroglucinol	Polyketide	25%

NZ_NKAQ01000003 (original name was: NZ_NKAQ01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	siderophore	820,984	837,559
Region 22.2	terpene	1,003,322	1,024,140	surfactin	NRP:Lipopeptide	13%

NZ_NKAQ01000005 (original name was: NZ_NKAQ01000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	lanthipeptide-class-i	89,030	115,540

NZ_NKAQ01000006 (original name was: NZ_NKAQ01000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	T3PKS	367,777	408,862

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	terpene	205,233	227,101
Region 12.1	RRE-containing	386,063	406,329
Region 12.2	phosphonate	631,905	673,422
Region 12.3	terpene	782,204	803,052	carotenoid	Terpene	50%
Region 13.1	NRPS-like	1	23,293	2,4-diacetylphloroglucinol	Polyketide	25%
Region 22.1	siderophore	820,984	837,559
Region 22.2	terpene	1,003,322	1,024,140	surfactin	NRP:Lipopeptide	13%
Region 24.1	lanthipeptide-class-i	89,030	115,540
Region 25.1	T3PKS	367,777	408,862

No secondary metabolite regions were found in these records:: NZ_NKAQ01000001 (original name was: NZ_NKAQ01000001.1); NZ_NKAQ01000010 (original name was: NZ_NKAQ01000010.1); NZ_NKAQ01000012 (original name was: NZ_NKAQ01000012.1); NZ_NKAQ01000013 (original name was: NZ_NKAQ01000013.1); NZ_NKAQ01000014 (original name was: NZ_NKAQ01000014.1); NZ_NKAQ01000015 (original name was: NZ_NKAQ01000015.1); NZ_NKAQ01000016 (original name was: NZ_NKAQ01000016.1); NZ_NKAQ01000017 (original name was: NZ_NKAQ01000017.1); NZ_NKAQ01000018 (original name was: NZ_NKAQ01000018.1); NZ_NKAQ01000019 (original name was: NZ_NKAQ01000019.1); NZ_NKAQ01000021 (original name was: NZ_NKAQ01000021.1); NZ_NKAQ01000022 (original name was: NZ_NKAQ01000022.1); NZ_NKAQ01000023 (original name was: NZ_NKAQ01000023.1); NZ_NKAQ01000024 (original name was: NZ_NKAQ01000024.1); NZ_NKAQ01000025 (original name was: NZ_NKAQ01000025.1); NZ_NKAQ01000026 (original name was: NZ_NKAQ01000026.1); NZ_NKAQ01000027 (original name was: NZ_NKAQ01000027.1); NZ_NKAQ01000028 (original name was: NZ_NKAQ01000028.1); NZ_NKAQ01000004 (original name was: NZ_NKAQ01000004.1); NZ_NKAQ01000007 (original name was: NZ_NKAQ01000007.1); NZ_NKAQ01000008 (original name was: NZ_NKAQ01000008.1); NZ_NKAQ01000009 (original name was: NZ_NKAQ01000009.1)

Compact view

c00003_NZ_NKAQ.. - Region 1 - terpene

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Location: 205,233 - 227,101 nt. (total: 21,869 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000557.1	0.17	RiPP	streptococcin A-FF22	Streptococcus pyogenes
BGC0000526.1	0.17	RiPP	macedocin	Streptococcus macedonicus
BGC0000547.1	0.17	RiPP	salivaricin 9	Streptococcus salivarius
BGC0001788.1	0.17	RiPP	suicin 65	Streptococcus suis
BGC0000545.1	0.16	RiPP	ruminococcin A	[Ruminococcus] gnavus E1
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000563.1	0.16	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000886.1	0.16	Other	allylmalonyl-CoA	Streptomyces tsukubensis
BGC0001407.1	0.16	RiPP	bicereucin	Bacillus cereus SJ1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000557.1	0.48	RiPP	streptococcin A-FF22	Streptococcus pyogenes
BGC0000526.1	0.48	RiPP	macedocin	Streptococcus macedonicus
BGC0000547.1	0.48	RiPP	salivaricin 9	Streptococcus salivarius
BGC0001788.1	0.47	RiPP	suicin 65	Streptococcus suis
BGC0000545.1	0.47	RiPP	ruminococcin A	[Ruminococcus] gnavus E1
BGC0000616.1	0.47	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000563.1	0.47	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000886.1	0.46	Other	allylmalonyl-CoA	Streptomyces tsukubensis
BGC0001407.1	0.46	RiPP	bicereucin	Bacillus cereus SJ1

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00012_NZ_NKAQ.. - Region 1 - RRE-containing

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Location: 386,063 - 406,329 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.23	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000761.1	0.19	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0000916.1	0.19	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0000786.1	0.17	Saccharide	O-antigen	Edwardsiella ictaluri 93-146
BGC0000782.1	0.17	Saccharide	O-antigen	Burkholderia pseudomallei 1026b
BGC0000777.1	0.17	Saccharide	lipopolysaccharide	Escherichia coli
BGC0000760.1	0.17	Saccharide	emulsan	Acinetobacter venetianus RAG-1 = CIP 110063
BGC0000790.1	0.16	Saccharide	O-antigen	Escherichia coli
BGC0000787.1	0.16	Saccharide	O-antigen	Escherichia coli
BGC0001407.1	0.16	RiPP	bicereucin	Bacillus cereus SJ1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.56	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000761.1	0.51	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0000916.1	0.51	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0000786.1	0.48	Saccharide	O-antigen	Edwardsiella ictaluri 93-146
BGC0000782.1	0.48	Saccharide	O-antigen	Burkholderia pseudomallei 1026b
BGC0000777.1	0.48	Saccharide	lipopolysaccharide	Escherichia coli
BGC0000760.1	0.48	Saccharide	emulsan	Acinetobacter venetianus RAG-1 = CIP 110063
BGC0000790.1	0.47	Saccharide	O-antigen	Escherichia coli
BGC0000787.1	0.47	Saccharide	O-antigen	Escherichia coli
BGC0001407.1	0.46	RiPP	bicereucin	Bacillus cereus SJ1

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00012_NZ_NKAQ.. - Region 2 - phosphonate

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Location: 631,905 - 673,422 nt. (total: 41,518 nt) Show pHMM detection rules used

phosphonate: phosphonates

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.28	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000904.1	0.23	Other	FR-900098	Streptomyces rubellomurinus
BGC0000937.1	0.23	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0000926.1	0.19	Other	rhizocticin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001104.1	0.19	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000897.1	0.19	Other	dehydrophos	Streptomyces luridus
BGC0002007.1	0.17	Terpene	atolypene A, atolypene B	Amycolatopsis tolypomycina
BGC0001739.1	0.17	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0002036.1	0.16	Other	dehydrofosmidomycin	Streptomyces lavendulae
BGC0000885.1	0.16	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.61	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000904.1	0.57	Other	FR-900098	Streptomyces rubellomurinus
BGC0000937.1	0.56	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0000926.1	0.51	Other	rhizocticin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001104.1	0.50	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000897.1	0.50	Other	dehydrophos	Streptomyces luridus
BGC0002007.1	0.48	Terpene	atolypene A, atolypene B	Amycolatopsis tolypomycina
BGC0001739.1	0.48	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0002036.1	0.47	Other	dehydrofosmidomycin	Streptomyces lavendulae
BGC0000885.1	0.47	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00012_NZ_NKAQ.. - Region 3 - terpene

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Location: 782,204 - 803,052 nt. (total: 20,849 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.33	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000650.1	0.31	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000645.1	0.27	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000885.1	0.24	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0000846.1	0.23	Other	tabtoxin	Pseudomonas syringae
BGC0000858.1	0.23	Other	ectoine	Methylobacter marinus
BGC0000937.1	0.23	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0000648.1	0.22	Terpene	carotenoid	Myxococcus xanthus
BGC0001456.1	0.22	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000633.1	0.21	Terpene	carotenoid	Streptomyces avermitilis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.67	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000650.1	0.65	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000645.1	0.61	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000885.1	0.57	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0000846.1	0.56	Other	tabtoxin	Pseudomonas syringae
BGC0000858.1	0.56	Other	ectoine	Methylobacter marinus
BGC0000937.1	0.56	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0000648.1	0.55	Terpene	carotenoid	Myxococcus xanthus
BGC0001456.1	0.55	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000633.1	0.54	Terpene	carotenoid	Streptomyces avermitilis

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00013_NZ_NKAQ.. - Region 1 - NRPS-like

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Location: 1 - 23,293 nt. (total: 23,293 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

Detailed domain annotation

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Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001527.1	0.31	Other	basidioferrin	Gelatoporia subvermispora
BGC0001050.1	0.22	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0001627.1	0.22	NRP	isonitrile lipopeptides	Mycobacterium tuberculosis H37Rv
BGC0002002.1	0.22	NRP	1,6-phenazinedimethanol, fontizine A	Serratia fonticola
BGC0001758.1	0.21	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001825.1	0.21	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001641.1	0.20	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0000348.1	0.20	NRP	ergovaline	Epichloe festucae var. lolii
BGC0001621.1	0.20	NRP	imizoquin A, imizoquin B, imizoquin C, imizoquin D, TMC-2A, TMC-2B	Aspergillus flavus NRRL3357
BGC0000900.1	0.20	Other	ferrichrome	Aspergillus oryzae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001527.1	0.64	Other	basidioferrin	Gelatoporia subvermispora
BGC0001050.1	0.55	NRP, Polyketide	thalassospiramide A	Tistrella bauzanensis
BGC0001627.1	0.55	NRP	isonitrile lipopeptides	Mycobacterium tuberculosis H37Rv
BGC0002002.1	0.55	NRP	1,6-phenazinedimethanol, fontizine A	Serratia fonticola
BGC0001758.1	0.54	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001825.1	0.53	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001641.1	0.53	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0000348.1	0.53	NRP	ergovaline	Epichloe festucae var. lolii
BGC0001621.1	0.53	NRP	imizoquin A, imizoquin B, imizoquin C, imizoquin D, TMC-2A, TMC-2B	Aspergillus flavus NRRL3357
BGC0000900.1	0.53	Other	ferrichrome	Aspergillus oryzae

Similar known gene clusters

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Detailed Pfam domain annotation

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 23293:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (thr) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg13_16

Search NORINE for peptide: strict or relaxed

AMP-binding (23..388): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMiHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 90% (moderate)

c00022_NZ_NKAQ.. - Region 1 - siderophore

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Location: 820,984 - 837,559 nt. (total: 16,576 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000942.1	0.30	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001478.1	0.28	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.26	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001572.1	0.26	Other	desferrioxamine E	Pantoea agglomerans
BGC0000859.1	0.25	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000855.1	0.25	Other	ectoine	Methylomicrobium kenyense
BGC0001531.1	0.25	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0000852.1	0.25	Other	ectoine	Sporosarcina pasteurii
BGC0000856.1	0.24	Other	ectoine	Methylophaga thalassica
BGC0001453.1	0.23	Other	desferrioxamine	Streptomyces argillaceus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000942.1	0.63	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001478.1	0.61	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.60	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001572.1	0.59	Other	desferrioxamine E	Pantoea agglomerans
BGC0000859.1	0.58	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000855.1	0.58	Other	ectoine	Methylomicrobium kenyense
BGC0001531.1	0.58	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0000852.1	0.58	Other	ectoine	Sporosarcina pasteurii
BGC0000856.1	0.57	Other	ectoine	Methylophaga thalassica
BGC0001453.1	0.56	Other	desferrioxamine	Streptomyces argillaceus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00022_NZ_NKAQ.. - Region 2 - terpene

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Location: 1,003,322 - 1,024,140 nt. (total: 20,819 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000548.1	0.17	RiPP	salivaricin A	Streptococcus salivarius
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000516.1	0.16	RiPP	geobacillin II	Geobacillus thermodenitrificans
BGC0000527.1	0.16	RiPP	mersacidin	Bacillus sp. HIL-Y85/54728
BGC0000502.1	0.16	RiPP	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0001210.1	0.15	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000496.1	0.15	RiPP	AmfS	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000558.1	0.15	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000539.1	0.15	RiPP	nukacin ISK-1	Staphylococcus warneri

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000548.1	0.48	RiPP	salivaricin A	Streptococcus salivarius
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000516.1	0.46	RiPP	geobacillin II	Geobacillus thermodenitrificans
BGC0000527.1	0.46	RiPP	mersacidin	Bacillus sp. HIL-Y85/54728
BGC0000502.1	0.46	RiPP	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0001210.1	0.46	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000496.1	0.46	RiPP	AmfS	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000558.1	0.46	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000539.1	0.46	RiPP	nukacin ISK-1	Staphylococcus warneri

Similar known gene clusters

Detailed Pfam domain annotation

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c00024_NZ_NKAQ.. - Region 1 - lanthipeptide-class-i

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Location: 89,030 - 115,540 nt. (total: 26,511 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Lanthipeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000543.1	0.29	RiPP	pep5	Staphylococcus epidermidis
BGC0000542.1	0.27	RiPP	paenicidin B	Paenibacillus terrae
BGC0000541.1	0.27	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0000538.1	0.27	RiPP	nisin Z	Lactococcus lactis
BGC0001289.1	0.27	RiPP	penisin	Paenibacillus ehimensis
BGC0000503.1	0.26	RiPP	cinnamycin	Streptomyces cinnamoneus
BGC0000528.1	0.26	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000540.1	0.25	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0001579.1	0.25	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000563.1	0.25	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000543.1	0.63	RiPP	pep5	Staphylococcus epidermidis
BGC0000542.1	0.60	RiPP	paenicidin B	Paenibacillus terrae
BGC0000541.1	0.60	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0000538.1	0.60	RiPP	nisin Z	Lactococcus lactis
BGC0001289.1	0.60	RiPP	penisin	Paenibacillus ehimensis
BGC0000503.1	0.59	RiPP	cinnamycin	Streptomyces cinnamoneus
BGC0000528.1	0.59	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000540.1	0.59	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0001579.1	0.59	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000563.1	0.58	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712

Similar known gene clusters

No matches found.

Lanthipeptide predictions

Lanthipeptide(s) for ctg24_96 - Putative Class I

ctg24_97 leader / core peptide: MNNVKNLFDLDVQVTTASSDVDPQ - IDhbDhaVDhaLCDhbPGCGDDhbGDhaWNDhaFCC
allorf_105781_105921 leader / core peptide: MNNVKNLFDLDVQVTTASSDVDPQ - IDhbDhaVDhaLCDhbPGCGDDhbGDhaWNDhaFCC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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Lanthipeptides

Core peptide predictions

ctg24_97 - Class I

Cleavage pHMM score: 13.90

RODEO score: 31

Monoisotopic mass: 2064.9 Da

Molecular weight: 2066.4 Da

Number of bridges: 3

Additional modifications: AviCys

Alternative weights: (assuming N unmodified Ser/Thr residues); 2084.4 Da N = 1; 2102.4 Da N = 2; 2120.4 Da N = 3

allorf_105781_105921 - Class I

Cleavage pHMM score: 13.90

RODEO score: 28

Monoisotopic mass: 2064.9 Da

Molecular weight: 2066.4 Da

Number of bridges: 3

Additional modifications: AviCys

Alternative weights: (assuming N unmodified Ser/Thr residues); 2084.4 Da N = 1; 2102.4 Da N = 2; 2120.4 Da N = 3

c00025_NZ_NKAQ.. - Region 1 - T3PKS

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Location: 367,777 - 408,862 nt. (total: 41,086 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000282.1	0.34	Polyketide	alkylresorcinol	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001962.1	0.31	Polyketide	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0001938.1	0.31	Polyketide	entotheonella	Candidatus Entotheonella serta
BGC0001310.1	0.25	Terpene	naringenin	Streptomyces clavuligerus ATCC 27064
BGC0001831.1	0.22	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0000528.1	0.17	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001525.1	0.16	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000551.1	0.16	RiPP	SapB	Streptomyces coelicolor A3(2)

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000282.1	0.67	Polyketide	alkylresorcinol	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001962.1	0.65	Polyketide	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0001938.1	0.64	Polyketide	entotheonella	Candidatus Entotheonella serta
BGC0001310.1	0.59	Terpene	naringenin	Streptomyces clavuligerus ATCC 27064
BGC0001831.1	0.55	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0000528.1	0.48	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001525.1	0.47	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000551.1	0.46	RiPP	SapB	Streptomyces coelicolor A3(2)

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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