GCF_902375345.1_MGYG-HGUT-01479_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00034_NZ_CABK.. (original name was: NZ_CABKTP010000034.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	thiopeptide,LAP	1	22,478

c00056_NZ_CABK.. (original name was: NZ_CABKTP010000056.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 56.1	ranthipeptide	1	11,713

c00142_NZ_CABK.. (original name was: NZ_CABKTP010000142.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 142.1	cyclic-lactone-autoinducer	80,696	101,250

Region	Type	From	To	Similarity
Region 34.1	thiopeptide,LAP	1	22,478
Region 56.1	ranthipeptide	1	11,713
Region 142.1	cyclic-lactone-autoinducer	80,696	101,250

No secondary metabolite regions were found in these records:: c00001_NZ_CABK.. (original name was: NZ_CABKTP010000001.1); c00002_NZ_CABK.. (original name was: NZ_CABKTP010000002.1); c00003_NZ_CABK.. (original name was: NZ_CABKTP010000003.1); c00004_NZ_CABK.. (original name was: NZ_CABKTP010000004.1); c00005_NZ_CABK.. (original name was: NZ_CABKTP010000005.1); c00006_NZ_CABK.. (original name was: NZ_CABKTP010000006.1); c00007_NZ_CABK.. (original name was: NZ_CABKTP010000007.1); c00008_NZ_CABK.. (original name was: NZ_CABKTP010000008.1); c00009_NZ_CABK.. (original name was: NZ_CABKTP010000009.1); c00010_NZ_CABK.. (original name was: NZ_CABKTP010000010.1); c00011_NZ_CABK.. (original name was: NZ_CABKTP010000011.1); c00012_NZ_CABK.. (original name was: NZ_CABKTP010000012.1); c00013_NZ_CABK.. (original name was: NZ_CABKTP010000013.1); c00014_NZ_CABK.. (original name was: NZ_CABKTP010000014.1); c00015_NZ_CABK.. (original name was: NZ_CABKTP010000015.1); c00016_NZ_CABK.. (original name was: NZ_CABKTP010000016.1); c00017_NZ_CABK.. (original name was: NZ_CABKTP010000017.1); c00018_NZ_CABK.. (original name was: NZ_CABKTP010000018.1); c00019_NZ_CABK.. (original name was: NZ_CABKTP010000019.1); c00020_NZ_CABK.. (original name was: NZ_CABKTP010000020.1); c00021_NZ_CABK.. (original name was: NZ_CABKTP010000021.1); c00022_NZ_CABK.. (original name was: NZ_CABKTP010000022.1); c00023_NZ_CABK.. (original name was: NZ_CABKTP010000023.1); c00024_NZ_CABK.. (original name was: NZ_CABKTP010000024.1); c00025_NZ_CABK.. (original name was: NZ_CABKTP010000025.1); c00026_NZ_CABK.. (original name was: NZ_CABKTP010000026.1); c00027_NZ_CABK.. (original name was: NZ_CABKTP010000027.1); c00028_NZ_CABK.. (original name was: NZ_CABKTP010000028.1); c00029_NZ_CABK.. (original name was: NZ_CABKTP010000029.1); c00030_NZ_CABK.. (original name was: NZ_CABKTP010000030.1); c00031_NZ_CABK.. (original name was: NZ_CABKTP010000031.1); c00032_NZ_CABK.. (original name was: NZ_CABKTP010000032.1); c00033_NZ_CABK.. (original name was: NZ_CABKTP010000033.1); c00035_NZ_CABK.. (original name was: NZ_CABKTP010000035.1); c00036_NZ_CABK.. (original name was: NZ_CABKTP010000036.1); c00037_NZ_CABK.. (original name was: NZ_CABKTP010000037.1); c00038_NZ_CABK.. (original name was: NZ_CABKTP010000038.1); c00039_NZ_CABK.. (original name was: NZ_CABKTP010000039.1); c00040_NZ_CABK.. (original name was: NZ_CABKTP010000040.1); c00041_NZ_CABK.. (original name was: NZ_CABKTP010000041.1); c00042_NZ_CABK.. (original name was: NZ_CABKTP010000042.1); c00043_NZ_CABK.. (original name was: NZ_CABKTP010000043.1); c00044_NZ_CABK.. (original name was: NZ_CABKTP010000044.1); c00045_NZ_CABK.. (original name was: NZ_CABKTP010000045.1); c00046_NZ_CABK.. (original name was: NZ_CABKTP010000046.1); c00047_NZ_CABK.. (original name was: NZ_CABKTP010000047.1); c00048_NZ_CABK.. (original name was: NZ_CABKTP010000048.1); c00049_NZ_CABK.. (original name was: NZ_CABKTP010000049.1); c00050_NZ_CABK.. (original name was: NZ_CABKTP010000050.1); c00051_NZ_CABK.. (original name was: NZ_CABKTP010000051.1); c00052_NZ_CABK.. (original name was: NZ_CABKTP010000052.1); c00053_NZ_CABK.. (original name was: NZ_CABKTP010000053.1); c00054_NZ_CABK.. (original name was: NZ_CABKTP010000054.1); c00055_NZ_CABK.. (original name was: NZ_CABKTP010000055.1); c00057_NZ_CABK.. (original name was: NZ_CABKTP010000057.1); c00058_NZ_CABK.. (original name was: NZ_CABKTP010000058.1); c00059_NZ_CABK.. (original name was: NZ_CABKTP010000059.1); c00060_NZ_CABK.. (original name was: NZ_CABKTP010000060.1); c00061_NZ_CABK.. (original name was: NZ_CABKTP010000061.1); c00062_NZ_CABK.. (original name was: NZ_CABKTP010000062.1); c00063_NZ_CABK.. (original name was: NZ_CABKTP010000063.1); c00064_NZ_CABK.. (original name was: NZ_CABKTP010000064.1); c00065_NZ_CABK.. (original name was: NZ_CABKTP010000065.1); c00066_NZ_CABK.. (original name was: NZ_CABKTP010000066.1); c00067_NZ_CABK.. (original name was: NZ_CABKTP010000067.1); c00068_NZ_CABK.. (original name was: NZ_CABKTP010000068.1); c00069_NZ_CABK.. (original name was: NZ_CABKTP010000069.1); c00070_NZ_CABK.. (original name was: NZ_CABKTP010000070.1); c00071_NZ_CABK.. (original name was: NZ_CABKTP010000071.1); c00072_NZ_CABK.. (original name was: NZ_CABKTP010000072.1); c00073_NZ_CABK.. (original name was: NZ_CABKTP010000073.1); c00074_NZ_CABK.. (original name was: NZ_CABKTP010000074.1); c00075_NZ_CABK.. (original name was: NZ_CABKTP010000075.1); c00076_NZ_CABK.. (original name was: NZ_CABKTP010000076.1); c00077_NZ_CABK.. (original name was: NZ_CABKTP010000077.1); c00078_NZ_CABK.. (original name was: NZ_CABKTP010000078.1); c00079_NZ_CABK.. (original name was: NZ_CABKTP010000079.1); c00080_NZ_CABK.. (original name was: NZ_CABKTP010000080.1); c00081_NZ_CABK.. (original name was: NZ_CABKTP010000081.1); c00082_NZ_CABK.. (original name was: NZ_CABKTP010000082.1); c00083_NZ_CABK.. (original name was: NZ_CABKTP010000083.1); c00084_NZ_CABK.. (original name was: NZ_CABKTP010000084.1); c00085_NZ_CABK.. (original name was: NZ_CABKTP010000085.1); c00086_NZ_CABK.. (original name was: NZ_CABKTP010000086.1); c00087_NZ_CABK.. (original name was: NZ_CABKTP010000087.1); c00088_NZ_CABK.. (original name was: NZ_CABKTP010000088.1); c00089_NZ_CABK.. (original name was: NZ_CABKTP010000089.1); c00090_NZ_CABK.. (original name was: NZ_CABKTP010000090.1); c00091_NZ_CABK.. (original name was: NZ_CABKTP010000091.1); c00092_NZ_CABK.. (original name was: NZ_CABKTP010000092.1); c00093_NZ_CABK.. (original name was: NZ_CABKTP010000093.1); c00094_NZ_CABK.. (original name was: NZ_CABKTP010000094.1); c00095_NZ_CABK.. (original name was: NZ_CABKTP010000095.1); c00096_NZ_CABK.. (original name was: NZ_CABKTP010000096.1); c00097_NZ_CABK.. (original name was: NZ_CABKTP010000097.1); c00098_NZ_CABK.. (original name was: NZ_CABKTP010000098.1); c00099_NZ_CABK.. (original name was: NZ_CABKTP010000099.1); c00100_NZ_CABK.. (original name was: NZ_CABKTP010000100.1); c00101_NZ_CABK.. (original name was: NZ_CABKTP010000101.1); c00102_NZ_CABK.. (original name was: NZ_CABKTP010000102.1); c00103_NZ_CABK.. (original name was: NZ_CABKTP010000103.1); c00104_NZ_CABK.. (original name was: NZ_CABKTP010000104.1); c00105_NZ_CABK.. (original name was: NZ_CABKTP010000105.1); c00106_NZ_CABK.. (original name was: NZ_CABKTP010000106.1); c00107_NZ_CABK.. (original name was: NZ_CABKTP010000107.1); c00108_NZ_CABK.. (original name was: NZ_CABKTP010000108.1); c00109_NZ_CABK.. (original name was: NZ_CABKTP010000109.1); c00110_NZ_CABK.. (original name was: NZ_CABKTP010000110.1); c00111_NZ_CABK.. (original name was: NZ_CABKTP010000111.1); c00112_NZ_CABK.. (original name was: NZ_CABKTP010000112.1); c00113_NZ_CABK.. (original name was: NZ_CABKTP010000113.1); c00114_NZ_CABK.. (original name was: NZ_CABKTP010000114.1); c00115_NZ_CABK.. (original name was: NZ_CABKTP010000115.1); c00116_NZ_CABK.. (original name was: NZ_CABKTP010000116.1); c00117_NZ_CABK.. (original name was: NZ_CABKTP010000117.1); c00118_NZ_CABK.. (original name was: NZ_CABKTP010000118.1); c00119_NZ_CABK.. (original name was: NZ_CABKTP010000119.1); c00120_NZ_CABK.. (original name was: NZ_CABKTP010000120.1); c00121_NZ_CABK.. (original name was: NZ_CABKTP010000121.1); c00122_NZ_CABK.. (original name was: NZ_CABKTP010000122.1); c00123_NZ_CABK.. (original name was: NZ_CABKTP010000123.1); c00124_NZ_CABK.. (original name was: NZ_CABKTP010000124.1); c00125_NZ_CABK.. (original name was: NZ_CABKTP010000125.1); c00126_NZ_CABK.. (original name was: NZ_CABKTP010000126.1); c00127_NZ_CABK.. (original name was: NZ_CABKTP010000127.1); c00128_NZ_CABK.. (original name was: NZ_CABKTP010000128.1); c00129_NZ_CABK.. (original name was: NZ_CABKTP010000129.1); c00130_NZ_CABK.. (original name was: NZ_CABKTP010000130.1); c00131_NZ_CABK.. (original name was: NZ_CABKTP010000131.1); c00132_NZ_CABK.. (original name was: NZ_CABKTP010000132.1); c00133_NZ_CABK.. (original name was: NZ_CABKTP010000133.1); c00134_NZ_CABK.. (original name was: NZ_CABKTP010000134.1); c00135_NZ_CABK.. (original name was: NZ_CABKTP010000135.1); c00136_NZ_CABK.. (original name was: NZ_CABKTP010000136.1); c00137_NZ_CABK.. (original name was: NZ_CABKTP010000137.1); c00138_NZ_CABK.. (original name was: NZ_CABKTP010000138.1); c00139_NZ_CABK.. (original name was: NZ_CABKTP010000139.1); c00140_NZ_CABK.. (original name was: NZ_CABKTP010000140.1); c00141_NZ_CABK.. (original name was: NZ_CABKTP010000141.1); c00143_NZ_CABK.. (original name was: NZ_CABKTP010000143.1); c00144_NZ_CABK.. (original name was: NZ_CABKTP010000144.1); c00145_NZ_CABK.. (original name was: NZ_CABKTP010000145.1); c00146_NZ_CABK.. (original name was: NZ_CABKTP010000146.1); c00147_NZ_CABK.. (original name was: NZ_CABKTP010000147.1); c00148_NZ_CABK.. (original name was: NZ_CABKTP010000148.1); c00149_NZ_CABK.. (original name was: NZ_CABKTP010000149.1); c00150_NZ_CABK.. (original name was: NZ_CABKTP010000150.1); c00151_NZ_CABK.. (original name was: NZ_CABKTP010000151.1); c00152_NZ_CABK.. (original name was: NZ_CABKTP010000152.1); c00153_NZ_CABK.. (original name was: NZ_CABKTP010000153.1); c00154_NZ_CABK.. (original name was: NZ_CABKTP010000154.1); c00155_NZ_CABK.. (original name was: NZ_CABKTP010000155.1); c00156_NZ_CABK.. (original name was: NZ_CABKTP010000156.1); c00157_NZ_CABK.. (original name was: NZ_CABKTP010000157.1); c00158_NZ_CABK.. (original name was: NZ_CABKTP010000158.1); c00159_NZ_CABK.. (original name was: NZ_CABKTP010000159.1); c00160_NZ_CABK.. (original name was: NZ_CABKTP010000160.1); c00161_NZ_CABK.. (original name was: NZ_CABKTP010000161.1)

Compact view

c00034_NZ_CABK.. - Region 1 - LAP,thiopeptide

Download region GenBank file

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Location: 1 - 22,478 nt. (total: 22,478 nt) Show pHMM detection rules used

Region on contig edge.

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)
LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03882 or TIGR03604)) or TIGR03603 or TIGR03602) and not cyanobactin_synth)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001171.1	0.66	RiPP	listeriolysin S	Listeria monocytogenes serotype 4b str. F2365
BGC0000569.1	0.55	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0000568.1	0.51	RiPP	microcin B17	Escherichia coli
BGC0000566.1	0.50	RiPP	streptolysin S	Streptococcus pyogenes M1 GAS
BGC0000564.1	0.46	RiPP	clostridiolysin S	Clostridium botulinum A str. ATCC 3502
BGC0001170.1	0.46	RiPP	clostridiolysin S	Clostridium sporogenes ATCC 15579
BGC0000605.1	0.42	RiPP	GE37468	Streptomyces sp. ATCC 55365
BGC0000601.1	0.41	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0000600.1	0.40	RiPP	thurincin H	Bacillus thuringiensis
BGC0000602.1	0.38	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001171.1	0.66	RiPP	listeriolysin S	Listeria monocytogenes serotype 4b str. F2365
BGC0000569.1	0.61	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0000568.1	0.59	RiPP	microcin B17	Escherichia coli
BGC0000566.1	0.59	RiPP	streptolysin S	Streptococcus pyogenes M1 GAS
BGC0000564.1	0.56	RiPP	clostridiolysin S	Clostridium botulinum A str. ATCC 3502
BGC0001170.1	0.56	RiPP	clostridiolysin S	Clostridium sporogenes ATCC 15579
BGC0000605.1	0.54	RiPP	GE37468	Streptomyces sp. ATCC 55365
BGC0000601.1	0.53	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0000600.1	0.52	RiPP	thurincin H	Bacillus thuringiensis
BGC0000602.1	0.51	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633

Similar known gene clusters

No matches found.

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

Thiopeptides

Core peptide predictions

No core peptides found.

c00056_NZ_CABK.. - Region 1 - ranthipeptide

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Location: 1 - 11,713 nt. (total: 11,713 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.19	Other	nucleocidin	Streptomyces calvus
BGC0000599.1	0.14	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0000466.1	0.13	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0000604.1	0.07	RiPP	GE2270A	Nonomuraea sp. WU8817
BGC0001591.1	0.07	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.07	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0001155.1	0.07	RiPP	GE2270	Planobispora rosea
BGC0000027.1	0.06	Polyketide	ankaflavin, monascin, rubropunctatine, monascorubrin	Monascus pilosus
BGC0001190.1	0.05	Polyketide	fusaric acid	Fusarium verticillioides 7600
BGC0001751.1	0.03	NRP, Polyketide	pyxipyrrolone A, pyxipyrrolone B	Pyxidicoccus sp. MCy9557

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.51	Other	nucleocidin	Streptomyces calvus
BGC0000599.1	0.44	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0000466.1	0.41	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0000604.1	0.28	RiPP	GE2270A	Nonomuraea sp. WU8817
BGC0001591.1	0.28	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.28	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0001155.1	0.27	RiPP	GE2270	Planobispora rosea
BGC0000027.1	0.26	Polyketide	ankaflavin, monascin, rubropunctatine, monascorubrin	Monascus pilosus
BGC0001190.1	0.23	Polyketide	fusaric acid	Fusarium verticillioides 7600
BGC0001751.1	0.16	NRP, Polyketide	pyxipyrrolone A, pyxipyrrolone B	Pyxidicoccus sp. MCy9557

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00142_NZ_CABK.. - Region 1 - cyclic-lactone-autoinducer

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Location: 80,696 - 101,250 nt. (total: 20,555 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001210.1	0.18	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001779.1	0.17	RiPP	siamycin	Streptomyces nodosus
BGC0001579.1	0.17	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000616.1	0.17	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000563.1	0.17	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000539.1	0.17	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000626.1	0.17	RiPP	thuricin	Bacillus thuringiensis
BGC0000486.1	0.17	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000775.1	0.16	Saccharide	lipopolysaccharide	Legionella pneumophila
BGC0000736.1	0.16	Saccharide	capsular polysaccharide	Mannheimia haemolytica

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001210.1	0.49	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001779.1	0.49	RiPP	siamycin	Streptomyces nodosus
BGC0001579.1	0.49	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000616.1	0.48	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000563.1	0.48	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000539.1	0.48	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000626.1	0.48	RiPP	thuricin	Bacillus thuringiensis
BGC0000486.1	0.48	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000775.1	0.47	Saccharide	lipopolysaccharide	Legionella pneumophila
BGC0000736.1	0.47	Saccharide	capsular polysaccharide	Mannheimia haemolytica

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names