GCF_000023285.1_ASM2328v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NC_013162.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	resorcinol	663,783	704,910	flexirubin	Polyketide	16%
Region 2	arylpolyene	872,548	916,398	flexirubin	Polyketide	11%
Region 3	arylpolyene	994,595	1,033,874
Region 4	arylpolyene	1,511,158	1,552,246

NC_013162.1 - Region 1 - resorcinol

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Location: 663,783 - 704,910 nt. (total: 41,128 nt) Show pHMM detection rules used

resorcinol: DarB

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0001210.1	0.16	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001863.1	0.16	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000528.1	0.16	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001576.1	0.16	RiPP	divamide A	Prochloron didemni
BGC0000592.1	0.15	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0000527.1	0.15	RiPP	mersacidin	Bacillus sp. HIL-Y85/54728
BGC0001787.1	0.15	RiPP	suicin 3908	Streptococcus suis
BGC0001779.1	0.15	RiPP	siamycin	Streptomyces nodosus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0001210.1	0.46	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001863.1	0.46	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000528.1	0.46	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001576.1	0.46	RiPP	divamide A	Prochloron didemni
BGC0000592.1	0.46	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0000527.1	0.46	RiPP	mersacidin	Bacillus sp. HIL-Y85/54728
BGC0001787.1	0.46	RiPP	suicin 3908	Streptococcus suis
BGC0001779.1	0.45	RiPP	siamycin	Streptomyces nodosus

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NC_013162.1 - Region 2 - arylpolyene

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Location: 872,548 - 916,398 nt. (total: 43,851 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000272.1	0.21	Polyketide	spore pigment	Streptomyces collinus
BGC0000248.1	0.21	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0001465.1	0.20	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0000231.1	0.20	Polyketide	griseusin	Streptomyces griseus
BGC0000890.1	0.20	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0000891.1	0.19	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas luteoviolacea 2ta16
BGC0001947.1	0.19	Saccharide	K53 capsular polysaccharide	Acinetobacter baumannii
BGC0000234.1	0.19	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000760.1	0.19	Saccharide	emulsan	Acinetobacter venetianus RAG-1 = CIP 110063
BGC0001197.1	0.19	Polyketide	frankiamicin	Frankia sp. EAN1pec

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000272.1	0.54	Polyketide	spore pigment	Streptomyces collinus
BGC0000248.1	0.54	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0001465.1	0.52	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0000231.1	0.52	Polyketide	griseusin	Streptomyces griseus
BGC0000890.1	0.52	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0000891.1	0.52	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas luteoviolacea 2ta16
BGC0001947.1	0.51	Saccharide	K53 capsular polysaccharide	Acinetobacter baumannii
BGC0000234.1	0.51	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000760.1	0.51	Saccharide	emulsan	Acinetobacter venetianus RAG-1 = CIP 110063
BGC0001197.1	0.51	Polyketide	frankiamicin	Frankia sp. EAN1pec

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

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NC_013162.1 - Region 3 - arylpolyene

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Location: 994,595 - 1,033,874 nt. (total: 39,280 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000761.1	0.16	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0001917.1	0.16	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0001987.1	0.15	Polyketide	koreenceine A, koreenceine B, koreenceine C, koreenceine D	Pseudomonas koreensis
BGC0001219.1	0.13	Polyketide	shanorellin	Chaetomium globosum CBS 148.51
BGC0001244.1	0.11	Polyketide	(-)-Mellein	Parastagonospora nodorum
BGC0001273.1	0.11	Polyketide	asperlactone	Aspergillus ochraceus
BGC0001275.1	0.11	Polyketide	6-methylsalicyclic acid	Glarea lozoyensis
BGC0001276.1	0.11	Polyketide	6-methylsalicyclic acid	Aspergillus terreus
BGC0001897.1	0.08	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000255.1	0.08	Polyketide	pederin	Uncultured bacterium

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000761.1	0.47	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0001917.1	0.46	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0001987.1	0.45	Polyketide	koreenceine A, koreenceine B, koreenceine C, koreenceine D	Pseudomonas koreensis
BGC0001219.1	0.42	Polyketide	shanorellin	Chaetomium globosum CBS 148.51
BGC0001244.1	0.38	Polyketide	(-)-Mellein	Parastagonospora nodorum
BGC0001273.1	0.37	Polyketide	asperlactone	Aspergillus ochraceus
BGC0001275.1	0.37	Polyketide	6-methylsalicyclic acid	Glarea lozoyensis
BGC0001276.1	0.37	Polyketide	6-methylsalicyclic acid	Aspergillus terreus
BGC0001897.1	0.31	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000255.1	0.30	Polyketide	pederin	Uncultured bacterium

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NC_013162.1 - Region 4 - arylpolyene

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Location: 1,511,158 - 1,552,246 nt. (total: 41,089 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001361.1	0.27	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0001538.1	0.26	NRP, Polyketide	caboxamycin	Streptomyces sp. NTK 937
BGC0001444.1	0.24	Other	caboxamycin	Streptomyces sp. NTK 937
BGC0001594.1	0.24	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0001197.1	0.24	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0001595.1	0.23	Alkaloid	fischerindole	Fischerella sp. SAG 46.79
BGC0000668.1	0.22	Terpene, Alkaloid	12-epi-hapalindole C isonitrile, 12-epi-hapalindole E, 12-epi-fischerindole U isonitrile, fischerindole L, 12-epi-fischerindole I isonitrile, welwitindolinone A isonitrile, welwitindolinone B isothiocyanate, welwitindolinone C isothiocyanate, N-methylwelwitindolinone C isothiocyanate, N-methylwelwitinsolinone C isonitrile, 3-epi-welwitindolinone B isothiocyanate, 3-(Z-2'-isocyanoethenyl)-indole	Hapalosiphon welwitschii UTEX B 1830
BGC0000880.1	0.21	Other (Nucleoside)	tunicamycin B1	Streptomyces chartreusis NRRL 3882
BGC0000836.1	0.21	Other	APE Ec	Escherichia coli CFT073
BGC0000231.1	0.21	Polyketide	griseusin	Streptomyces griseus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001361.1	0.61	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0001538.1	0.60	NRP, Polyketide	caboxamycin	Streptomyces sp. NTK 937
BGC0001444.1	0.57	Other	caboxamycin	Streptomyces sp. NTK 937
BGC0001594.1	0.57	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0001197.1	0.57	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0001595.1	0.56	Alkaloid	fischerindole	Fischerella sp. SAG 46.79
BGC0000668.1	0.55	Terpene, Alkaloid	12-epi-hapalindole C isonitrile, 12-epi-hapalindole E, 12-epi-fischerindole U isonitrile, fischerindole L, 12-epi-fischerindole I isonitrile, welwitindolinone A isonitrile, welwitindolinone B isothiocyanate, welwitindolinone C isothiocyanate, N-methylwelwitindolinone C isothiocyanate, N-methylwelwitinsolinone C isonitrile, 3-epi-welwitindolinone B isothiocyanate, 3-(Z-2'-isocyanoethenyl)-indole	Hapalosiphon welwitschii UTEX B 1830
BGC0000880.1	0.54	Other (Nucleoside)	tunicamycin B1	Streptomyces chartreusis NRRL 3882
BGC0000836.1	0.54	Other	APE Ec	Escherichia coli CFT073
BGC0000231.1	0.54	Polyketide	griseusin	Streptomyces griseus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names