GCF_900176335.1_IMG-taxon_2588254267_annotated_assembly_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_FWXW01000010 (original name was: NZ_FWXW01000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	ranthipeptide	1	17,699

NZ_FWXW01000004 (original name was: NZ_FWXW01000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	cyclic-lactone-autoinducer	42,967	65,922

NZ_FWXW01000007 (original name was: NZ_FWXW01000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RRE-containing	1,004	21,420

Region	Type	From	To	Similarity
Region 13.1	ranthipeptide	1	17,699
Region 14.1	cyclic-lactone-autoinducer	42,967	65,922
Region 17.1	RRE-containing	1,004	21,420

No secondary metabolite regions were found in these records:: NZ_FWXW01000019 (original name was: NZ_FWXW01000019.1); NZ_FWXW01000018 (original name was: NZ_FWXW01000018.1); NZ_FWXW01000020 (original name was: NZ_FWXW01000020.1); NZ_FWXW01000016 (original name was: NZ_FWXW01000016.1); NZ_FWXW01000017 (original name was: NZ_FWXW01000017.1); NZ_FWXW01000014 (original name was: NZ_FWXW01000014.1); NZ_FWXW01000013 (original name was: NZ_FWXW01000013.1); NZ_FWXW01000011 (original name was: NZ_FWXW01000011.1); NZ_FWXW01000001 (original name was: NZ_FWXW01000001.1); NZ_FWXW01000002 (original name was: NZ_FWXW01000002.1); NZ_FWXW01000006 (original name was: NZ_FWXW01000006.1); NZ_FWXW01000003 (original name was: NZ_FWXW01000003.1); NZ_FWXW01000005 (original name was: NZ_FWXW01000005.1); NZ_FWXW01000015 (original name was: NZ_FWXW01000015.1); NZ_FWXW01000012 (original name was: NZ_FWXW01000012.1); NZ_FWXW01000008 (original name was: NZ_FWXW01000008.1); NZ_FWXW01000009 (original name was: NZ_FWXW01000009.1)

Compact view

c00013_NZ_FWXW.. - Region 1 - ranthipeptide

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Location: 1 - 17,699 nt. (total: 17,699 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000599.1	0.11	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0000695.1	0.09	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0000807.1	0.07	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0000397.1	0.06	NRP	nostocyclopeptide A2	Nostoc sp. ATCC 53789
BGC0001028.1	0.05	NRP, Polyketide	nostopeptolide A2	Nostoc sp. GSV224
BGC0000430.1	0.03	NRP, Polyketide	spumigin E	Nodularia spumigena CCY9414
BGC0000413.1	0.03	NRP	pyoverdin	Pseudomonas protegens Pf-5
BGC0000299.1	0.03	NRP	alterochromide A, bromoalterochromide A, dibromoalterochromide A, alterochromide B, bromoalterochromide B, dibromoalterochromide B, alterochromide A', bromoalterochromide A', dibromoalterochromide A', alterochromide B', bromoalterochromide B', dibromoalterochromide B', alterochromide A'', bromoalterochromide A'', alterochromide B'', bromoalterochromide B''	Pseudoalteromonas piscicida JCM 20779

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000599.1	0.38	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0000695.1	0.33	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0000807.1	0.29	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0000397.1	0.24	NRP	nostocyclopeptide A2	Nostoc sp. ATCC 53789
BGC0001028.1	0.22	NRP, Polyketide	nostopeptolide A2	Nostoc sp. GSV224
BGC0000430.1	0.17	NRP, Polyketide	spumigin E	Nodularia spumigena CCY9414
BGC0000413.1	0.15	NRP	pyoverdin	Pseudomonas protegens Pf-5
BGC0000299.1	0.14	NRP	alterochromide A, bromoalterochromide A, dibromoalterochromide A, alterochromide B, bromoalterochromide B, dibromoalterochromide B, alterochromide A', bromoalterochromide A', dibromoalterochromide A', alterochromide B', bromoalterochromide B', dibromoalterochromide B', alterochromide A'', bromoalterochromide A'', alterochromide B'', bromoalterochromide B''	Pseudoalteromonas piscicida JCM 20779

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00014_NZ_FWXW.. - Region 1 - cyclic-lactone-autoinducer

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Location: 42,967 - 65,922 nt. (total: 22,956 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000558.1	0.16	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001371.1	0.09	NRP	echinocandin B	Aspergillus nidulans NRRL 8112
BGC0001669.1	0.08	RiPP	microvionin	Microbacterium arborescens
BGC0000240.1	0.05	Polyketide, Saccharide	lomaiviticin A, lomaiviticin C, lomaiviticin D, lomaiviticin E	Salinispora pacifica
BGC0001590.1	0.05	Polyketide	formicamycins A-M	Streptomyces sp. KY5
BGC0001979.1	0.04	Polyketide	LL-D49194α1 (LLD)	Streptomyces vinaceusdrappus
BGC0001059.1	0.03	NRP, Polyketide	zwittermicin A	Bacillus cereus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000558.1	0.46	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001371.1	0.34	NRP	echinocandin B	Aspergillus nidulans NRRL 8112
BGC0001669.1	0.31	RiPP	microvionin	Microbacterium arborescens
BGC0000240.1	0.22	Polyketide, Saccharide	lomaiviticin A, lomaiviticin C, lomaiviticin D, lomaiviticin E	Salinispora pacifica
BGC0001590.1	0.21	Polyketide	formicamycins A-M	Streptomyces sp. KY5
BGC0001979.1	0.20	Polyketide	LL-D49194α1 (LLD)	Streptomyces vinaceusdrappus
BGC0001059.1	0.17	NRP, Polyketide	zwittermicin A	Bacillus cereus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00017_NZ_FWXW.. - Region 1 - RRE-containing

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Location: 1,004 - 21,420 nt. (total: 20,417 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000644.1	0.19	Terpene	carotenoid	Dietzia sp. CQ4
BGC0001610.1	0.16	Other	gougerotin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0000762.1	0.16	Saccharide	exopolysaccharide	Rhizobium leguminosarum bv. viciae
BGC0000748.1	0.16	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000740.1	0.16	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000747.1	0.16	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000746.1	0.16	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000752.1	0.16	Saccharide	capsular polysaccharide	Actinobacillus pleuropneumoniae serovar 6 str. Femo
BGC0000763.1	0.16	Saccharide	stewartan	Pantoea stewartii subsp. stewartii DC283
BGC0000776.1	0.16	Saccharide	lipopolysaccharide	Escherichia coli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000644.1	0.51	Terpene	carotenoid	Dietzia sp. CQ4
BGC0001610.1	0.47	Other	gougerotin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0000762.1	0.47	Saccharide	exopolysaccharide	Rhizobium leguminosarum bv. viciae
BGC0000748.1	0.47	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000740.1	0.47	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000747.1	0.47	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000746.1	0.47	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000752.1	0.47	Saccharide	capsular polysaccharide	Actinobacillus pleuropneumoniae serovar 6 str. Femo
BGC0000763.1	0.46	Saccharide	stewartan	Pantoea stewartii subsp. stewartii DC283
BGC0000776.1	0.46	Saccharide	lipopolysaccharide	Escherichia coli

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names