GCF_910575425.1_MGBC000127_genomic - 8 region(s)

Identified primary metabolite regions

c00002_NZ_CAJT.. (original name was: NZ_CAJTFZ010000002.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	TPP_AA_metabolism	Putative	76,791	102,787

c00003_NZ_CAJT.. (original name was: NZ_CAJTFZ010000003.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 3.1	NADH_dehydrogenase_I	E-MGC	41,610	71,724	NADH dehydrogenase I Bacteroides sp.	NADHD	66%
Region 3.2	fatty_acids-unassigned	Putative	185,507	216,075

c00007_NZ_CAJT.. (original name was: NZ_CAJTFZ010000007.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 7.1	Pyruvate2acetate-formate	SCFA	55,015	77,987	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%

c00008_NZ_CAJT.. (original name was: NZ_CAJTFZ010000008.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 8.1	porA	SCFA	124,616	147,461	porA C. sporogenes	POR	60%

c00015_NZ_CAJT.. (original name was: NZ_CAJTFZ010000015.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 15.1	Rnf_complex	E-MGC	86,107	109,360	Rnf complex C. sporogenes	RNF	66%

c00017_NZ_CAJT.. (original name was: NZ_CAJTFZ010000017.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	Fumarate2succinate	SCFA	1	14,739	Fumarate to succinate B. thetaiotaomicron	SUC	100%

c00070_NZ_CAJT.. (original name was: NZ_CAJTFZ010000070.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 70.1	PFOR_II_pathway	SCFA	1	12,018	PFOR II pathway B. thetaiotaomicron	PFORII	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 2.1	TPP_AA_metabolism	Putative	76,791	102,787
Region 3.1	NADH_dehydrogenase_I	E-MGC	41,610	71,724	NADH dehydrogenase I Bacteroides sp.	NADHD	66%
Region 3.2	fatty_acids-unassigned	Putative	185,507	216,075
Region 7.1	Pyruvate2acetate-formate	SCFA	55,015	77,987	Pyruvate to acetate-formate B. thetaiotaomicron	PFL_acetate	100%
Region 8.1	porA	SCFA	124,616	147,461	porA C. sporogenes	POR	60%
Region 15.1	Rnf_complex	E-MGC	86,107	109,360	Rnf complex C. sporogenes	RNF	66%
Region 17.1	Fumarate2succinate	SCFA	1	14,739	Fumarate to succinate B. thetaiotaomicron	SUC	100%
Region 70.1	PFOR_II_pathway	SCFA	1	12,018	PFOR II pathway B. thetaiotaomicron	PFORII	100%

No primary metabolite regions were found in these records:: c00001_NZ_CAJT.. (original name was: NZ_CAJTFZ010000001.1); c00004_NZ_CAJT.. (original name was: NZ_CAJTFZ010000004.1); c00005_NZ_CAJT.. (original name was: NZ_CAJTFZ010000005.1); c00006_NZ_CAJT.. (original name was: NZ_CAJTFZ010000006.1); c00009_NZ_CAJT.. (original name was: NZ_CAJTFZ010000009.1); c00010_NZ_CAJT.. (original name was: NZ_CAJTFZ010000010.1); c00011_NZ_CAJT.. (original name was: NZ_CAJTFZ010000011.1); c00012_NZ_CAJT.. (original name was: NZ_CAJTFZ010000012.1); c00013_NZ_CAJT.. (original name was: NZ_CAJTFZ010000013.1); c00014_NZ_CAJT.. (original name was: NZ_CAJTFZ010000014.1); c00016_NZ_CAJT.. (original name was: NZ_CAJTFZ010000016.1); c00018_NZ_CAJT.. (original name was: NZ_CAJTFZ010000018.1); c00019_NZ_CAJT.. (original name was: NZ_CAJTFZ010000019.1); c00020_NZ_CAJT.. (original name was: NZ_CAJTFZ010000020.1); c00021_NZ_CAJT.. (original name was: NZ_CAJTFZ010000021.1); c00022_NZ_CAJT.. (original name was: NZ_CAJTFZ010000022.1); c00023_NZ_CAJT.. (original name was: NZ_CAJTFZ010000023.1); c00024_NZ_CAJT.. (original name was: NZ_CAJTFZ010000024.1); c00025_NZ_CAJT.. (original name was: NZ_CAJTFZ010000025.1); c00026_NZ_CAJT.. (original name was: NZ_CAJTFZ010000026.1); c00027_NZ_CAJT.. (original name was: NZ_CAJTFZ010000027.1); c00028_NZ_CAJT.. (original name was: NZ_CAJTFZ010000028.1); c00029_NZ_CAJT.. (original name was: NZ_CAJTFZ010000029.1); c00030_NZ_CAJT.. (original name was: NZ_CAJTFZ010000030.1); c00031_NZ_CAJT.. (original name was: NZ_CAJTFZ010000031.1); c00032_NZ_CAJT.. (original name was: NZ_CAJTFZ010000032.1); c00033_NZ_CAJT.. (original name was: NZ_CAJTFZ010000033.1); c00034_NZ_CAJT.. (original name was: NZ_CAJTFZ010000034.1); c00035_NZ_CAJT.. (original name was: NZ_CAJTFZ010000035.1); c00036_NZ_CAJT.. (original name was: NZ_CAJTFZ010000036.1); c00037_NZ_CAJT.. (original name was: NZ_CAJTFZ010000037.1); c00038_NZ_CAJT.. (original name was: NZ_CAJTFZ010000038.1); c00039_NZ_CAJT.. (original name was: NZ_CAJTFZ010000039.1); c00040_NZ_CAJT.. (original name was: NZ_CAJTFZ010000040.1); c00041_NZ_CAJT.. (original name was: NZ_CAJTFZ010000041.1); c00042_NZ_CAJT.. (original name was: NZ_CAJTFZ010000042.1); c00043_NZ_CAJT.. (original name was: NZ_CAJTFZ010000043.1); c00044_NZ_CAJT.. (original name was: NZ_CAJTFZ010000044.1); c00045_NZ_CAJT.. (original name was: NZ_CAJTFZ010000045.1); c00046_NZ_CAJT.. (original name was: NZ_CAJTFZ010000046.1); c00047_NZ_CAJT.. (original name was: NZ_CAJTFZ010000047.1); c00048_NZ_CAJT.. (original name was: NZ_CAJTFZ010000048.1); c00049_NZ_CAJT.. (original name was: NZ_CAJTFZ010000049.1); c00050_NZ_CAJT.. (original name was: NZ_CAJTFZ010000050.1); c00051_NZ_CAJT.. (original name was: NZ_CAJTFZ010000051.1); c00052_NZ_CAJT.. (original name was: NZ_CAJTFZ010000052.1); c00053_NZ_CAJT.. (original name was: NZ_CAJTFZ010000053.1); c00054_NZ_CAJT.. (original name was: NZ_CAJTFZ010000054.1); c00055_NZ_CAJT.. (original name was: NZ_CAJTFZ010000055.1); c00056_NZ_CAJT.. (original name was: NZ_CAJTFZ010000056.1); c00057_NZ_CAJT.. (original name was: NZ_CAJTFZ010000057.1); c00058_NZ_CAJT.. (original name was: NZ_CAJTFZ010000058.1); c00059_NZ_CAJT.. (original name was: NZ_CAJTFZ010000059.1); c00060_NZ_CAJT.. (original name was: NZ_CAJTFZ010000060.1); c00061_NZ_CAJT.. (original name was: NZ_CAJTFZ010000061.1); c00062_NZ_CAJT.. (original name was: NZ_CAJTFZ010000062.1); c00063_NZ_CAJT.. (original name was: NZ_CAJTFZ010000063.1); c00064_NZ_CAJT.. (original name was: NZ_CAJTFZ010000064.1); c00065_NZ_CAJT.. (original name was: NZ_CAJTFZ010000065.1); c00066_NZ_CAJT.. (original name was: NZ_CAJTFZ010000066.1); c00067_NZ_CAJT.. (original name was: NZ_CAJTFZ010000067.1); c00068_NZ_CAJT.. (original name was: NZ_CAJTFZ010000068.1); c00069_NZ_CAJT.. (original name was: NZ_CAJTFZ010000069.1); c00071_NZ_CAJT.. (original name was: NZ_CAJTFZ010000071.1); c00072_NZ_CAJT.. (original name was: NZ_CAJTFZ010000072.1); c00073_NZ_CAJT.. (original name was: NZ_CAJTFZ010000073.1); c00074_NZ_CAJT.. (original name was: NZ_CAJTFZ010000074.1); c00075_NZ_CAJT.. (original name was: NZ_CAJTFZ010000075.1); c00076_NZ_CAJT.. (original name was: NZ_CAJTFZ010000076.1); c00077_NZ_CAJT.. (original name was: NZ_CAJTFZ010000077.1); c00078_NZ_CAJT.. (original name was: NZ_CAJTFZ010000078.1); c00079_NZ_CAJT.. (original name was: NZ_CAJTFZ010000079.1); c00080_NZ_CAJT.. (original name was: NZ_CAJTFZ010000080.1); c00081_NZ_CAJT.. (original name was: NZ_CAJTFZ010000081.1); c00082_NZ_CAJT.. (original name was: NZ_CAJTFZ010000082.1); c00083_NZ_CAJT.. (original name was: NZ_CAJTFZ010000083.1); c00084_NZ_CAJT.. (original name was: NZ_CAJTFZ010000084.1); c00085_NZ_CAJT.. (original name was: NZ_CAJTFZ010000085.1); c00086_NZ_CAJT.. (original name was: NZ_CAJTFZ010000086.1); c00087_NZ_CAJT.. (original name was: NZ_CAJTFZ010000087.1); c00088_NZ_CAJT.. (original name was: NZ_CAJTFZ010000088.1); c00089_NZ_CAJT.. (original name was: NZ_CAJTFZ010000089.1); c00090_NZ_CAJT.. (original name was: NZ_CAJTFZ010000090.1); c00091_NZ_CAJT.. (original name was: NZ_CAJTFZ010000091.1); c00092_NZ_CAJT.. (original name was: NZ_CAJTFZ010000092.1); c00093_NZ_CAJT.. (original name was: NZ_CAJTFZ010000093.1); c00094_NZ_CAJT.. (original name was: NZ_CAJTFZ010000094.1); c00095_NZ_CAJT.. (original name was: NZ_CAJTFZ010000095.1); c00096_NZ_CAJT.. (original name was: NZ_CAJTFZ010000096.1); c00097_NZ_CAJT.. (original name was: NZ_CAJTFZ010000097.1); c00098_NZ_CAJT.. (original name was: NZ_CAJTFZ010000098.1); c00099_NZ_CAJT.. (original name was: NZ_CAJTFZ010000099.1); c00100_NZ_CAJT.. (original name was: NZ_CAJTFZ010000100.1); c00101_NZ_CAJT.. (original name was: NZ_CAJTFZ010000101.1); c00102_NZ_CAJT.. (original name was: NZ_CAJTFZ010000102.1); c00103_NZ_CAJT.. (original name was: NZ_CAJTFZ010000103.1); c00104_NZ_CAJT.. (original name was: NZ_CAJTFZ010000104.1); c00105_NZ_CAJT.. (original name was: NZ_CAJTFZ010000105.1); c00106_NZ_CAJT.. (original name was: NZ_CAJTFZ010000106.1); c00107_NZ_CAJT.. (original name was: NZ_CAJTFZ010000107.1); c00108_NZ_CAJT.. (original name was: NZ_CAJTFZ010000108.1); c00109_NZ_CAJT.. (original name was: NZ_CAJTFZ010000109.1); c00110_NZ_CAJT.. (original name was: NZ_CAJTFZ010000110.1); c00111_NZ_CAJT.. (original name was: NZ_CAJTFZ010000111.1); c00112_NZ_CAJT.. (original name was: NZ_CAJTFZ010000112.1); c00113_NZ_CAJT.. (original name was: NZ_CAJTFZ010000113.1); c00114_NZ_CAJT.. (original name was: NZ_CAJTFZ010000114.1); c00115_NZ_CAJT.. (original name was: NZ_CAJTFZ010000115.1); c00116_NZ_CAJT.. (original name was: NZ_CAJTFZ010000116.1); c00117_NZ_CAJT.. (original name was: NZ_CAJTFZ010000117.1); c00118_NZ_CAJT.. (original name was: NZ_CAJTFZ010000118.1); c00119_NZ_CAJT.. (original name was: NZ_CAJTFZ010000119.1); c00120_NZ_CAJT.. (original name was: NZ_CAJTFZ010000120.1); c00121_NZ_CAJT.. (original name was: NZ_CAJTFZ010000121.1); c00122_NZ_CAJT.. (original name was: NZ_CAJTFZ010000122.1); c00123_NZ_CAJT.. (original name was: NZ_CAJTFZ010000123.1)

Compact view

c00002_NZ_CAJT.. - Region 1 - TPP_AA_metabolism

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Location: 76,791 - 102,787 nt. (total: 25,997 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00003_NZ_CAJT.. - Region 1 - NADH_dehydrogenase_I

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Location: 41,610 - 71,724 nt. (total: 30,115 nt) Show pHMM detection rules used

NADH_dehydrogenase_I: (Oxidored_q4 and Oxidored_q6 and Complex1_30kDa and Complex1_49kDa and NADHdh and Oxidored_q3 and Oxidored_q2 and minimum(4, [Fe-2S_thioredx, Fer2_4, Fer4_7, Molybdop_Fe4S4, Molydop_binding, NADH-G_4Fe-4S_3, NADH_4Fe-4S, Proton_antipo_M, Proton_antipo_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00003_NZ_CAJT.. - Region 2 - fatty_acids-unassigned

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Location: 185,507 - 216,075 nt. (total: 30,569 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00007_NZ_CAJT.. - Region 1 - Pyruvate2acetate-formate

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Location: 55,015 - 77,987 nt. (total: 22,973 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00008_NZ_CAJT.. - Region 1 - porA

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Location: 124,616 - 147,461 nt. (total: 22,846 nt) Show pHMM detection rules used

porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00015_NZ_CAJT.. - Region 1 - Rnf_complex

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Location: 86,107 - 109,360 nt. (total: 23,254 nt) Show pHMM detection rules used

Region on contig edge.

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00017_NZ_CAJT.. - Region 1 - Fumarate2succinate

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Location: 1 - 14,739 nt. (total: 14,739 nt) Show pHMM detection rules used

Region on contig edge.

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00070_NZ_CAJT.. - Region 1 - PFOR_II_pathway

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Location: 1 - 12,018 nt. (total: 12,018 nt) Show pHMM detection rules used

Region on contig edge.

PFOR_II_pathway: cds(POR and POR_N and PFOR_II and EKR and Fer4_16 and TPP_enzyme_C)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters