GCF_003959475.1_ASM395947v1_genomic - 7 region(s)

Identified primary metabolite regions

NZ_PEMR01000088 (original name was: NZ_PEMR01000088.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 88.1	NADH_dehydrogenase_I	E-MGC	258	25,898	NADH dehydrogenase I E. coli	NADHD	76%

NZ_PEMR01000110 (original name was: NZ_PEMR01000110.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 110.1	fatty_acids-unassigned	Putative	1,637	24,931	Acetate to butyrate C. sporogenes	BUT	33%

NZ_PEMR01000177 (original name was: NZ_PEMR01000177.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 170.1	Fumarate2succinate	SCFA	7,926	21,242	Fumarate2succinate suc dh E. coli	SUC	100%

NZ_PEMR01000222 (original name was: NZ_PEMR01000222.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 175.1	TPP_AA_metabolism	Putative	1	21,042

NZ_PEMR01000259 (original name was: NZ_PEMR01000259.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 197.1	Glycine_cleavage	Other	19,750	35,756	Glycine cleavage C. sticklandii	GLY	80%

NZ_PEMR01000273 (original name was: NZ_PEMR01000273.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 211.1	Putrescine2spermidine	Aliphatic_amine	1	11,554

NZ_PEMR01000306 (original name was: NZ_PEMR01000306.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 244.1	Nitrate_reductase	E-MGC	1	8,433	Nitrate reductase E. coli	NIR	40%

No primary metabolite regions were found in these records:: NZ_PEMR01000001 (original name was: NZ_PEMR01000001.1); NZ_PEMR01000002 (original name was: NZ_PEMR01000002.1); NZ_PEMR01000003 (original name was: NZ_PEMR01000003.1); NZ_PEMR01000004 (original name was: NZ_PEMR01000004.1); NZ_PEMR01000005 (original name was: NZ_PEMR01000005.1); NZ_PEMR01000006 (original name was: NZ_PEMR01000006.1); NZ_PEMR01000007 (original name was: NZ_PEMR01000007.1); NZ_PEMR01000008 (original name was: NZ_PEMR01000008.1); NZ_PEMR01000009 (original name was: NZ_PEMR01000009.1); NZ_PEMR01000010 (original name was: NZ_PEMR01000010.1); NZ_PEMR01000011 (original name was: NZ_PEMR01000011.1); NZ_PEMR01000012 (original name was: NZ_PEMR01000012.1); NZ_PEMR01000013 (original name was: NZ_PEMR01000013.1); NZ_PEMR01000014 (original name was: NZ_PEMR01000014.1); NZ_PEMR01000015 (original name was: NZ_PEMR01000015.1); NZ_PEMR01000016 (original name was: NZ_PEMR01000016.1); NZ_PEMR01000017 (original name was: NZ_PEMR01000017.1); NZ_PEMR01000018 (original name was: NZ_PEMR01000018.1); NZ_PEMR01000019 (original name was: NZ_PEMR01000019.1); NZ_PEMR01000020 (original name was: NZ_PEMR01000020.1); NZ_PEMR01000021 (original name was: NZ_PEMR01000021.1); NZ_PEMR01000022 (original name was: NZ_PEMR01000022.1); NZ_PEMR01000023 (original name was: NZ_PEMR01000023.1); NZ_PEMR01000024 (original name was: NZ_PEMR01000024.1); NZ_PEMR01000025 (original name was: NZ_PEMR01000025.1); NZ_PEMR01000026 (original name was: NZ_PEMR01000026.1); NZ_PEMR01000027 (original name was: NZ_PEMR01000027.1); NZ_PEMR01000028 (original name was: NZ_PEMR01000028.1); NZ_PEMR01000029 (original name was: NZ_PEMR01000029.1); NZ_PEMR01000030 (original name was: NZ_PEMR01000030.1); NZ_PEMR01000031 (original name was: NZ_PEMR01000031.1); NZ_PEMR01000032 (original name was: NZ_PEMR01000032.1); NZ_PEMR01000033 (original name was: NZ_PEMR01000033.1); NZ_PEMR01000034 (original name was: NZ_PEMR01000034.1); NZ_PEMR01000035 (original name was: NZ_PEMR01000035.1); NZ_PEMR01000036 (original name was: NZ_PEMR01000036.1); NZ_PEMR01000037 (original name was: NZ_PEMR01000037.1); NZ_PEMR01000038 (original name was: NZ_PEMR01000038.1); NZ_PEMR01000039 (original name was: NZ_PEMR01000039.1); NZ_PEMR01000040 (original name was: NZ_PEMR01000040.1); NZ_PEMR01000041 (original name was: NZ_PEMR01000041.1); NZ_PEMR01000042 (original name was: NZ_PEMR01000042.1); NZ_PEMR01000043 (original name was: NZ_PEMR01000043.1); NZ_PEMR01000044 (original name was: NZ_PEMR01000044.1); NZ_PEMR01000045 (original name was: NZ_PEMR01000045.1); NZ_PEMR01000046 (original name was: NZ_PEMR01000046.1); NZ_PEMR01000047 (original name was: NZ_PEMR01000047.1); NZ_PEMR01000048 (original name was: NZ_PEMR01000048.1); NZ_PEMR01000049 (original name was: NZ_PEMR01000049.1); NZ_PEMR01000050 (original name was: NZ_PEMR01000050.1); NZ_PEMR01000051 (original name was: NZ_PEMR01000051.1); NZ_PEMR01000052 (original name was: NZ_PEMR01000052.1); NZ_PEMR01000053 (original name was: NZ_PEMR01000053.1); NZ_PEMR01000054 (original name was: NZ_PEMR01000054.1); NZ_PEMR01000055 (original name was: NZ_PEMR01000055.1); NZ_PEMR01000056 (original name was: NZ_PEMR01000056.1); NZ_PEMR01000057 (original name was: NZ_PEMR01000057.1); NZ_PEMR01000058 (original name was: NZ_PEMR01000058.1); NZ_PEMR01000059 (original name was: NZ_PEMR01000059.1); NZ_PEMR01000060 (original name was: NZ_PEMR01000060.1); NZ_PEMR01000061 (original name was: NZ_PEMR01000061.1); NZ_PEMR01000062 (original name was: NZ_PEMR01000062.1); NZ_PEMR01000063 (original name was: NZ_PEMR01000063.1); NZ_PEMR01000064 (original name was: NZ_PEMR01000064.1); NZ_PEMR01000065 (original name was: NZ_PEMR01000065.1); NZ_PEMR01000066 (original name was: NZ_PEMR01000066.1); NZ_PEMR01000067 (original name was: NZ_PEMR01000067.1); NZ_PEMR01000068 (original name was: NZ_PEMR01000068.1); NZ_PEMR01000069 (original name was: NZ_PEMR01000069.1); NZ_PEMR01000070 (original name was: NZ_PEMR01000070.1); NZ_PEMR01000071 (original name was: NZ_PEMR01000071.1); NZ_PEMR01000072 (original name was: NZ_PEMR01000072.1); NZ_PEMR01000073 (original name was: NZ_PEMR01000073.1); NZ_PEMR01000074 (original name was: NZ_PEMR01000074.1); NZ_PEMR01000075 (original name was: NZ_PEMR01000075.1); NZ_PEMR01000076 (original name was: NZ_PEMR01000076.1); NZ_PEMR01000077 (original name was: NZ_PEMR01000077.1); NZ_PEMR01000078 (original name was: NZ_PEMR01000078.1); NZ_PEMR01000079 (original name was: NZ_PEMR01000079.1); NZ_PEMR01000080 (original name was: NZ_PEMR01000080.1); NZ_PEMR01000081 (original name was: NZ_PEMR01000081.1); NZ_PEMR01000082 (original name was: NZ_PEMR01000082.1); NZ_PEMR01000083 (original name was: NZ_PEMR01000083.1); NZ_PEMR01000084 (original name was: NZ_PEMR01000084.1); NZ_PEMR01000085 (original name was: NZ_PEMR01000085.1); NZ_PEMR01000086 (original name was: NZ_PEMR01000086.1); NZ_PEMR01000087 (original name was: NZ_PEMR01000087.1); NZ_PEMR01000089 (original name was: NZ_PEMR01000089.1); NZ_PEMR01000090 (original name was: NZ_PEMR01000090.1); NZ_PEMR01000091 (original name was: NZ_PEMR01000091.1); NZ_PEMR01000092 (original name was: NZ_PEMR01000092.1); NZ_PEMR01000093 (original name was: NZ_PEMR01000093.1); NZ_PEMR01000094 (original name was: NZ_PEMR01000094.1); NZ_PEMR01000095 (original name was: NZ_PEMR01000095.1); NZ_PEMR01000096 (original name was: NZ_PEMR01000096.1); NZ_PEMR01000097 (original name was: NZ_PEMR01000097.1); NZ_PEMR01000098 (original name was: NZ_PEMR01000098.1); NZ_PEMR01000099 (original name was: NZ_PEMR01000099.1); NZ_PEMR01000100 (original name was: NZ_PEMR01000100.1); NZ_PEMR01000101 (original name was: NZ_PEMR01000101.1); NZ_PEMR01000102 (original name was: NZ_PEMR01000102.1); NZ_PEMR01000103 (original name was: NZ_PEMR01000103.1); NZ_PEMR01000104 (original name was: NZ_PEMR01000104.1); NZ_PEMR01000105 (original name was: NZ_PEMR01000105.1); NZ_PEMR01000106 (original name was: NZ_PEMR01000106.1); NZ_PEMR01000107 (original name was: NZ_PEMR01000107.1); NZ_PEMR01000108 (original name was: NZ_PEMR01000108.1); NZ_PEMR01000109 (original name was: NZ_PEMR01000109.1); NZ_PEMR01000111 (original name was: NZ_PEMR01000111.1); NZ_PEMR01000112 (original name was: NZ_PEMR01000112.1); NZ_PEMR01000113 (original name was: NZ_PEMR01000113.1); NZ_PEMR01000114 (original name was: NZ_PEMR01000114.1); NZ_PEMR01000115 (original name was: NZ_PEMR01000115.1); NZ_PEMR01000116 (original name was: NZ_PEMR01000116.1); NZ_PEMR01000117 (original name was: NZ_PEMR01000117.1); NZ_PEMR01000118 (original name was: NZ_PEMR01000118.1); NZ_PEMR01000119 (original name was: NZ_PEMR01000119.1); NZ_PEMR01000120 (original name was: NZ_PEMR01000120.1); NZ_PEMR01000121 (original name was: NZ_PEMR01000121.1); NZ_PEMR01000122 (original name was: NZ_PEMR01000122.1); NZ_PEMR01000123 (original name was: NZ_PEMR01000123.1); NZ_PEMR01000124 (original name was: NZ_PEMR01000124.1); NZ_PEMR01000125 (original name was: NZ_PEMR01000125.1); NZ_PEMR01000126 (original name was: NZ_PEMR01000126.1); NZ_PEMR01000127 (original name was: NZ_PEMR01000127.1); NZ_PEMR01000128 (original name was: NZ_PEMR01000128.1); NZ_PEMR01000129 (original name was: NZ_PEMR01000129.1); NZ_PEMR01000130 (original name was: NZ_PEMR01000130.1); NZ_PEMR01000131 (original name was: NZ_PEMR01000131.1); NZ_PEMR01000132 (original name was: NZ_PEMR01000132.1); NZ_PEMR01000133 (original name was: NZ_PEMR01000133.1); NZ_PEMR01000134 (original name was: NZ_PEMR01000134.1); NZ_PEMR01000135 (original name was: NZ_PEMR01000135.1); NZ_PEMR01000136 (original name was: NZ_PEMR01000136.1); NZ_PEMR01000137 (original name was: NZ_PEMR01000137.1); NZ_PEMR01000138 (original name was: NZ_PEMR01000138.1); NZ_PEMR01000139 (original name was: NZ_PEMR01000139.1); NZ_PEMR01000140 (original name was: NZ_PEMR01000140.1); NZ_PEMR01000141 (original name was: NZ_PEMR01000141.1); NZ_PEMR01000142 (original name was: NZ_PEMR01000142.1); NZ_PEMR01000143 (original name was: NZ_PEMR01000143.1); NZ_PEMR01000144 (original name was: NZ_PEMR01000144.1); NZ_PEMR01000145 (original name was: NZ_PEMR01000145.1); NZ_PEMR01000146 (original name was: NZ_PEMR01000146.1); NZ_PEMR01000147 (original name was: NZ_PEMR01000147.1); NZ_PEMR01000148 (original name was: NZ_PEMR01000148.1); NZ_PEMR01000149 (original name was: NZ_PEMR01000149.1); NZ_PEMR01000150 (original name was: NZ_PEMR01000150.1); NZ_PEMR01000151 (original name was: NZ_PEMR01000151.1); NZ_PEMR01000152 (original name was: NZ_PEMR01000152.1); NZ_PEMR01000153 (original name was: NZ_PEMR01000153.1); NZ_PEMR01000154 (original name was: NZ_PEMR01000154.1); NZ_PEMR01000155 (original name was: NZ_PEMR01000155.1); NZ_PEMR01000156 (original name was: NZ_PEMR01000156.1); NZ_PEMR01000157 (original name was: NZ_PEMR01000157.1); NZ_PEMR01000158 (original name was: NZ_PEMR01000158.1); NZ_PEMR01000159 (original name was: NZ_PEMR01000159.1); NZ_PEMR01000160 (original name was: NZ_PEMR01000160.1); NZ_PEMR01000161 (original name was: NZ_PEMR01000161.1); NZ_PEMR01000162 (original name was: NZ_PEMR01000162.1); NZ_PEMR01000163 (original name was: NZ_PEMR01000163.1); NZ_PEMR01000164 (original name was: NZ_PEMR01000164.1); NZ_PEMR01000165 (original name was: NZ_PEMR01000165.1); NZ_PEMR01000166 (original name was: NZ_PEMR01000166.1); NZ_PEMR01000167 (original name was: NZ_PEMR01000167.1); NZ_PEMR01000168 (original name was: NZ_PEMR01000168.1); NZ_PEMR01000169 (original name was: NZ_PEMR01000169.1); NZ_PEMR01000188 (original name was: NZ_PEMR01000188.1); NZ_PEMR01000199 (original name was: NZ_PEMR01000199.1); NZ_PEMR01000210 (original name was: NZ_PEMR01000210.1); NZ_PEMR01000221 (original name was: NZ_PEMR01000221.1); NZ_PEMR01000233 (original name was: NZ_PEMR01000233.1); NZ_PEMR01000239 (original name was: NZ_PEMR01000239.1); NZ_PEMR01000240 (original name was: NZ_PEMR01000240.1); NZ_PEMR01000241 (original name was: NZ_PEMR01000241.1); NZ_PEMR01000242 (original name was: NZ_PEMR01000242.1); NZ_PEMR01000243 (original name was: NZ_PEMR01000243.1); NZ_PEMR01000244 (original name was: NZ_PEMR01000244.1); NZ_PEMR01000245 (original name was: NZ_PEMR01000245.1); NZ_PEMR01000246 (original name was: NZ_PEMR01000246.1); NZ_PEMR01000247 (original name was: NZ_PEMR01000247.1); NZ_PEMR01000248 (original name was: NZ_PEMR01000248.1); NZ_PEMR01000249 (original name was: NZ_PEMR01000249.1); NZ_PEMR01000250 (original name was: NZ_PEMR01000250.1); NZ_PEMR01000251 (original name was: NZ_PEMR01000251.1); NZ_PEMR01000252 (original name was: NZ_PEMR01000252.1); NZ_PEMR01000253 (original name was: NZ_PEMR01000253.1); NZ_PEMR01000254 (original name was: NZ_PEMR01000254.1); NZ_PEMR01000255 (original name was: NZ_PEMR01000255.1); NZ_PEMR01000256 (original name was: NZ_PEMR01000256.1); NZ_PEMR01000257 (original name was: NZ_PEMR01000257.1); NZ_PEMR01000258 (original name was: NZ_PEMR01000258.1); NZ_PEMR01000260 (original name was: NZ_PEMR01000260.1); NZ_PEMR01000261 (original name was: NZ_PEMR01000261.1); NZ_PEMR01000262 (original name was: NZ_PEMR01000262.1); NZ_PEMR01000263 (original name was: NZ_PEMR01000263.1); NZ_PEMR01000264 (original name was: NZ_PEMR01000264.1); NZ_PEMR01000265 (original name was: NZ_PEMR01000265.1); NZ_PEMR01000266 (original name was: NZ_PEMR01000266.1); NZ_PEMR01000267 (original name was: NZ_PEMR01000267.1); NZ_PEMR01000268 (original name was: NZ_PEMR01000268.1); NZ_PEMR01000269 (original name was: NZ_PEMR01000269.1); NZ_PEMR01000270 (original name was: NZ_PEMR01000270.1); NZ_PEMR01000271 (original name was: NZ_PEMR01000271.1); NZ_PEMR01000272 (original name was: NZ_PEMR01000272.1); NZ_PEMR01000274 (original name was: NZ_PEMR01000274.1); NZ_PEMR01000275 (original name was: NZ_PEMR01000275.1); NZ_PEMR01000276 (original name was: NZ_PEMR01000276.1); NZ_PEMR01000277 (original name was: NZ_PEMR01000277.1); NZ_PEMR01000278 (original name was: NZ_PEMR01000278.1); NZ_PEMR01000279 (original name was: NZ_PEMR01000279.1); NZ_PEMR01000280 (original name was: NZ_PEMR01000280.1); NZ_PEMR01000281 (original name was: NZ_PEMR01000281.1); NZ_PEMR01000282 (original name was: NZ_PEMR01000282.1); NZ_PEMR01000283 (original name was: NZ_PEMR01000283.1); NZ_PEMR01000284 (original name was: NZ_PEMR01000284.1); NZ_PEMR01000285 (original name was: NZ_PEMR01000285.1); NZ_PEMR01000286 (original name was: NZ_PEMR01000286.1); NZ_PEMR01000287 (original name was: NZ_PEMR01000287.1); NZ_PEMR01000288 (original name was: NZ_PEMR01000288.1); NZ_PEMR01000289 (original name was: NZ_PEMR01000289.1); NZ_PEMR01000290 (original name was: NZ_PEMR01000290.1); NZ_PEMR01000291 (original name was: NZ_PEMR01000291.1); NZ_PEMR01000292 (original name was: NZ_PEMR01000292.1); NZ_PEMR01000293 (original name was: NZ_PEMR01000293.1); NZ_PEMR01000294 (original name was: NZ_PEMR01000294.1); NZ_PEMR01000295 (original name was: NZ_PEMR01000295.1); NZ_PEMR01000296 (original name was: NZ_PEMR01000296.1); NZ_PEMR01000297 (original name was: NZ_PEMR01000297.1); NZ_PEMR01000298 (original name was: NZ_PEMR01000298.1); NZ_PEMR01000299 (original name was: NZ_PEMR01000299.1); NZ_PEMR01000300 (original name was: NZ_PEMR01000300.1); NZ_PEMR01000301 (original name was: NZ_PEMR01000301.1); NZ_PEMR01000302 (original name was: NZ_PEMR01000302.1); NZ_PEMR01000303 (original name was: NZ_PEMR01000303.1); NZ_PEMR01000304 (original name was: NZ_PEMR01000304.1); NZ_PEMR01000305 (original name was: NZ_PEMR01000305.1); NZ_PEMR01000307 (original name was: NZ_PEMR01000307.1); NZ_PEMR01000308 (original name was: NZ_PEMR01000308.1); NZ_PEMR01000309 (original name was: NZ_PEMR01000309.1); NZ_PEMR01000310 (original name was: NZ_PEMR01000310.1); NZ_PEMR01000311 (original name was: NZ_PEMR01000311.1); NZ_PEMR01000312 (original name was: NZ_PEMR01000312.1); NZ_PEMR01000313 (original name was: NZ_PEMR01000313.1); NZ_PEMR01000314 (original name was: NZ_PEMR01000314.1)

Compact view

c00088_NZ_PEMR.. - Region 1 - NADH_dehydrogenase_I

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Location: 258 - 25,898 nt. (total: 25,641 nt) Show pHMM detection rules used

Region on contig edge.

NADH_dehydrogenase_I: (Oxidored_q4 and Oxidored_q6 and Complex1_30kDa and Complex1_49kDa and NADHdh and Oxidored_q3 and Oxidored_q2 and minimum(4, [Fe-2S_thioredx, Fer2_4, Fer4_7, Molybdop_Fe4S4, Molydop_binding, NADH-G_4Fe-4S_3, NADH_4Fe-4S, Proton_antipo_M, Proton_antipo_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

TTA codons

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00110_NZ_PEMR.. - Region 1 - fatty_acids-unassigned

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Location: 1,637 - 24,931 nt. (total: 23,295 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00170_NZ_PEMR.. - Region 1 - Fumarate2succinate

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Location: 7,926 - 21,242 nt. (total: 13,317 nt) Show pHMM detection rules used

Region on contig edge.

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00175_NZ_PEMR.. - Region 1 - TPP_AA_metabolism

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Location: 1 - 21,042 nt. (total: 21,042 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00197_NZ_PEMR.. - Region 1 - Glycine_cleavage

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Location: 19,750 - 35,756 nt. (total: 16,007 nt) Show pHMM detection rules used

Region on contig edge.

Glycine_cleavage: (minimum(2, [Aminotran_5, GCV_H, GCV_T, GDC-P, SoxG]) and GCV_H and GCV_T_C)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

TTA codons

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00211_NZ_PEMR.. - Region 1 - Putrescine2spermidine

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Location: 1 - 11,554 nt. (total: 11,554 nt) Show pHMM detection rules used

Region on contig edge.

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

TTA codons

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KnownClusterBlast

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No matches found.

c00244_NZ_PEMR.. - Region 1 - Nitrate_reductase

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Location: 1 - 8,433 nt. (total: 8,433 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters