Identified primary metabolite regions

NZ_RBIZ01000003 (original name was: NZ_RBIZ01000003.1)
Region Type Class From To Most similar known cluster Similarity
Region 1.1 Fumarate2succinate SCFA 3,394 33,827
Region 1.2 EUT_pathway,TMA SCFA-other 128,979 175,342 Ethanolamine degradation S. typhimurium EUT 84%
Region 1.3 fatty_acids-unassigned Putative 209,029 232,489
Region 1.4 NADH_dehydrogenase_I,Respiratory_glycerol E-MGC 274,729 330,800 NADH dehydrogenase I E. coli NADHD 100%
Region 1.5 Nitrate_reductase E-MGC 946,919 972,335 Nitrate reductase E. coli NIR 80%
Region 1.6 Rnf_complex E-MGC 1,087,179 1,112,683 Rnf complex C. sporogenes RNF 66%
Region 1.7 Formate_dehydrogenase,Nitrate_reductase E-MGC 1,257,104 1,296,979 Nitrate reductase E. coli NIR 80%
Region 1.8 Molybdopterin_dependent_oxidoreductase,PFOR_II_pathway SCFA 1,393,499 1,427,904 Tetrathionate to thiosulfate S. enterica THIOS 25%
Region 1.9 carnitine_degradaion_caiTABCDE npAA 1,437,031 1,464,074 Carnitine caiTABCDE E. coli CAR 100%
Region 1.10 Pyruvate2acetate-formate,Molybdopterin_dependent_oxidoreductase E-MGC 1,916,659 1,946,936 DMSO-TMAO reducatse E. coli DMSAO-TMAO 100%
Region 1.11 histidine2glutamate_hutHGIU_operon Other 2,080,494 2,106,853 Histidine to glutamate K. pneumoniae GLU 100%
Region 1.12 Fumarate2succinate SCFA 2,122,290 2,144,788 Fumarate2succinate suc dh E. coli SUC 100%
NZ_RBIZ01000004 (original name was: NZ_RBIZ01000004.1)
Region Type Class From To Most similar known cluster Similarity
Region 2.1 Ech_complex E-MGC 175,545 205,275 NADH dehydrogenase I Bacteroides sp. NADHD 9%
Region 2.2 Glycine_cleavage Other 335,363 364,413 Glycine cleavage C. sticklandii GLY 60%
Region 2.3 TPP_fatty_acids,Arginine2putrescine Aliphatic_amine 377,071 415,270 Arginine2putrescine E. coli PUTR 50%
Region 2.4 Threonine2propionate SCFA 579,251 610,114 Threonine to propionate E. coli PROP 80%
NZ_RBIZ01000005 (original name was: NZ_RBIZ01000005.1)
Region Type Class From To Most similar known cluster Similarity
Region 3.1 Fumarate2succinate SCFA 138,222 160,739 Fumarate2succinate fum red E. coli SUC 100%
Region 3.2 Arginine2_Hcarbonate Other 243,269 271,915 Arginine to hydrogen carbonate P. aeruginosa ARG 100%
Region 3.3 Others_HGD_unassigned Putative 341,956 363,880
Region 3.4 Putrescine2spermidine Aliphatic_amine 559,957 581,633
NZ_RBIZ01000008 (original name was: NZ_RBIZ01000008.1)
Region Type Class From To Most similar known cluster Similarity
Region 6.1 Formate_dehydrogenase E-MGC 20,822 45,419 Formate dehydrogenase E. coli FORM 100%
NZ_RBIZ01000009 (original name was: NZ_RBIZ01000009.1)
Region Type Class From To Most similar known cluster Similarity
Region 7.1 TPP_AA_metabolism Putative 57,306 79,858
No primary metabolite regions were found in these records:
NZ_RBIZ01000006 (original name was: NZ_RBIZ01000006.1)
NZ_RBIZ01000007 (original name was: NZ_RBIZ01000007.1)
NZ_RBIZ01000010 (original name was: NZ_RBIZ01000010.1)
NZ_RBIZ01000011 (original name was: NZ_RBIZ01000011.1)
NZ_RBIZ01000001 (original name was: NZ_RBIZ01000001.1)
NZ_RBIZ01000002 (original name was: NZ_RBIZ01000002.1)
Compact view