GCF_902501455.1_DSM13632_genomic - 3 region(s)

Identified primary metabolite regions

c00010_NZ_CABW.. (original name was: NZ_CABWIC010000011.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 10.1	Rnf_complex	E-MGC	366,335	393,620	Rnf complex C. sporogenes	RNF	50%

c00011_NZ_CABW.. (original name was: NZ_CABWIC010000030.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 11.1	Others_HGD_unassigned	Putative	53,059	77,666
Region 11.2	Pyruvate2acetate-formate	SCFA	186,634	211,294	Pyruvate to acetate and formate C. acetobutylicum	PFL_acetate	100%

No primary metabolite regions were found in these records:: c00001_NZ_CABW.. (original name was: NZ_CABWIC010000001.1); c00002_NZ_CABW.. (original name was: NZ_CABWIC010000002.1); c00003_NZ_CABW.. (original name was: NZ_CABWIC010000003.1); c00004_NZ_CABW.. (original name was: NZ_CABWIC010000004.1); c00005_NZ_CABW.. (original name was: NZ_CABWIC010000005.1); c00006_NZ_CABW.. (original name was: NZ_CABWIC010000006.1); c00007_NZ_CABW.. (original name was: NZ_CABWIC010000007.1); c00008_NZ_CABW.. (original name was: NZ_CABWIC010000008.1); c00009_NZ_CABW.. (original name was: NZ_CABWIC010000009.1)

Compact view

c00010_NZ_CABW.. - Region 1 - Rnf_complex

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Location: 366,335 - 393,620 nt. (total: 27,286 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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KnownClusterBlast

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c00011_NZ_CABW.. - Region 1 - Others_HGD_unassigned

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Location: 53,059 - 77,666 nt. (total: 24,608 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

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core biosynthetic genes

additional biosynthetic genes

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regulatory genes

resistance genes

encapsulation genes

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KnownClusterBlast

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No matches found.

c00011_NZ_CABW.. - Region 2 - Pyruvate2acetate-formate

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Location: 186,634 - 211,294 nt. (total: 24,661 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters