GCF_000612845.1_AP5T_genomic - 19 region(s)

Identified primary metabolite regions

NZ_CCAT010000012 (original name was: NZ_CCAT010000012.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 12.1	Glycine_reductase	SCFA	2,801	29,032	Glycine reductase C. sticklandii	GLY	83%
Region 12.2	Others_HGD_unassigned	Putative	46,409	70,689

NZ_CCAT010000016 (original name was: NZ_CCAT010000016.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 16.1	Arginine2_Hcarbonate	Other	10,696	29,512	Arginine to hydrogen carbonate P. aeruginosa	ARG	100%

NZ_CCAT010000021 (original name was: NZ_CCAT010000021.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 21.1	acetate2butyrate	SCFA	1,144	26,251	Acetate to butyrate C. sporogenes	BUT	83%

NZ_CCAT010000043 (original name was: NZ_CCAT010000043.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 33.1	Rnf_complex	E-MGC	96,796	121,914	Rnf complex C. sporogenes	RNF	100%
Region 33.2	OD_fatty_acids,OD_eut_pdu_related,OD_aldehydes_related,aminobutyrate2Butyrate	SCFA	259,287	303,776	Aminobutyrate to butyrate C. pasteurianum	AMINOBUT	30%

NZ_CCAT010000044 (original name was: NZ_CCAT010000044.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 34.1	OD_fatty_acids,porA	SCFA	58,883	85,758	porA C. sporogenes	POR	100%

NZ_CCAT010000045 (original name was: NZ_CCAT010000045.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 35.1	Others_HGD_unassigned	Putative	12,841	34,782
Region 35.2	p-cresol	Aromatic	70,012	93,908	P-cresol synthesis C. difficille	PCRE	100%

NZ_CCAT010000062 (original name was: NZ_CCAT010000062.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 49.1	Others_HGD_unassigned	Putative	221,427	244,343

NZ_CCAT010000063 (original name was: NZ_CCAT010000063.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 50.1	TMA	SCFA-other	1	23,407	Trimethylamine synthesis C. sporogenes	TMA	100%

NZ_CCAT010000065 (original name was: NZ_CCAT010000065.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 52.1	PFOR_II_pathway	SCFA	195,862	211,220	PFOR II pathway B. thetaiotaomicron	PFORII	100%

NZ_CCAT010000068 (original name was: NZ_CCAT010000068.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 55.1	EUT_pathway	SCFA-other	1	34,062	Ethanolamine degradation S. typhimurium	EUT	57%

NZ_CCAT010000083 (original name was: NZ_CCAT010000083.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 69.1	Glycine_cleavage	Other	88,549	112,882	Glycine cleavage C. sticklandii	GLY	80%
Region 69.2	PFOR_II_pathway,Hydroxy-L-proline2proline	Other	147,943	191,544	Hydroxy-L-proline2proline C. difficile	PRO	100%
Region 69.3	OD_AA_metabolism	Putative	284,594	315,439

NZ_CCAT010000085 (original name was: NZ_CCAT010000085.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 71.1	proline2aminovalerate	npAA	213,045	236,945	Proline to aminovalerate C. sticklandii	AMI	66%

NZ_CCAT010000087 (original name was: NZ_CCAT010000087.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 73.1	Lysine_degradation	SCFA	20,429	49,669	Lysine degradation C. sticklandii	LYS	61%

NZ_CCAT010000089 (original name was: NZ_CCAT010000089.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 75.1	Pyruvate2acetate-formate	SCFA	11,460	34,568	Pyruvate to acetate and formate C. acetobutylicum	PFL_acetate	100%

No primary metabolite regions were found in these records:: NZ_CCAT010000001 (original name was: NZ_CCAT010000001.1); NZ_CCAT010000002 (original name was: NZ_CCAT010000002.1); NZ_CCAT010000003 (original name was: NZ_CCAT010000003.1); NZ_CCAT010000004 (original name was: NZ_CCAT010000004.1); NZ_CCAT010000005 (original name was: NZ_CCAT010000005.1); NZ_CCAT010000006 (original name was: NZ_CCAT010000006.1); NZ_CCAT010000007 (original name was: NZ_CCAT010000007.1); NZ_CCAT010000008 (original name was: NZ_CCAT010000008.1); NZ_CCAT010000009 (original name was: NZ_CCAT010000009.1); NZ_CCAT010000010 (original name was: NZ_CCAT010000010.1); NZ_CCAT010000011 (original name was: NZ_CCAT010000011.1); NZ_CCAT010000013 (original name was: NZ_CCAT010000013.1); NZ_CCAT010000014 (original name was: NZ_CCAT010000014.1); NZ_CCAT010000015 (original name was: NZ_CCAT010000015.1); NZ_CCAT010000017 (original name was: NZ_CCAT010000017.1); NZ_CCAT010000018 (original name was: NZ_CCAT010000018.1); NZ_CCAT010000019 (original name was: NZ_CCAT010000019.1); NZ_CCAT010000020 (original name was: NZ_CCAT010000020.1); NZ_CCAT010000022 (original name was: NZ_CCAT010000022.1); NZ_CCAT010000023 (original name was: NZ_CCAT010000023.1); NZ_CCAT010000024 (original name was: NZ_CCAT010000024.1); NZ_CCAT010000026 (original name was: NZ_CCAT010000026.1); NZ_CCAT010000028 (original name was: NZ_CCAT010000028.1); NZ_CCAT010000030 (original name was: NZ_CCAT010000030.1); NZ_CCAT010000031 (original name was: NZ_CCAT010000031.1); NZ_CCAT010000039 (original name was: NZ_CCAT010000039.1); NZ_CCAT010000040 (original name was: NZ_CCAT010000040.1); NZ_CCAT010000041 (original name was: NZ_CCAT010000041.1); NZ_CCAT010000042 (original name was: NZ_CCAT010000042.1); NZ_CCAT010000046 (original name was: NZ_CCAT010000046.1); NZ_CCAT010000047 (original name was: NZ_CCAT010000047.1); NZ_CCAT010000048 (original name was: NZ_CCAT010000048.1); NZ_CCAT010000049 (original name was: NZ_CCAT010000049.1); NZ_CCAT010000050 (original name was: NZ_CCAT010000050.1); NZ_CCAT010000051 (original name was: NZ_CCAT010000051.1); NZ_CCAT010000052 (original name was: NZ_CCAT010000052.1); NZ_CCAT010000053 (original name was: NZ_CCAT010000053.1); NZ_CCAT010000054 (original name was: NZ_CCAT010000054.1); NZ_CCAT010000056 (original name was: NZ_CCAT010000056.1); NZ_CCAT010000057 (original name was: NZ_CCAT010000057.1); NZ_CCAT010000060 (original name was: NZ_CCAT010000060.1); NZ_CCAT010000061 (original name was: NZ_CCAT010000061.1); NZ_CCAT010000064 (original name was: NZ_CCAT010000064.1); NZ_CCAT010000066 (original name was: NZ_CCAT010000066.1); NZ_CCAT010000067 (original name was: NZ_CCAT010000067.1); NZ_CCAT010000069 (original name was: NZ_CCAT010000069.1); NZ_CCAT010000070 (original name was: NZ_CCAT010000070.1); NZ_CCAT010000071 (original name was: NZ_CCAT010000071.1); NZ_CCAT010000072 (original name was: NZ_CCAT010000072.1); NZ_CCAT010000073 (original name was: NZ_CCAT010000073.1); NZ_CCAT010000074 (original name was: NZ_CCAT010000074.1); NZ_CCAT010000075 (original name was: NZ_CCAT010000075.1); NZ_CCAT010000076 (original name was: NZ_CCAT010000076.1); NZ_CCAT010000077 (original name was: NZ_CCAT010000077.1); NZ_CCAT010000078 (original name was: NZ_CCAT010000078.1); NZ_CCAT010000079 (original name was: NZ_CCAT010000079.1); NZ_CCAT010000080 (original name was: NZ_CCAT010000080.1); NZ_CCAT010000081 (original name was: NZ_CCAT010000081.1); NZ_CCAT010000084 (original name was: NZ_CCAT010000084.1); NZ_CCAT010000086 (original name was: NZ_CCAT010000086.1); NZ_CCAT010000088 (original name was: NZ_CCAT010000088.1); NZ_CCAT010000090 (original name was: NZ_CCAT010000090.1); NZ_CCAT010000091 (original name was: NZ_CCAT010000091.1); NZ_CCAT010000092 (original name was: NZ_CCAT010000092.1); NZ_CCAT010000093 (original name was: NZ_CCAT010000093.1); NZ_CCAT010000094 (original name was: NZ_CCAT010000094.1); NZ_CCAT010000096 (original name was: NZ_CCAT010000096.1)

Compact view

c00012_NZ_CCAT.. - Region 1 - Glycine_reductase

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Location: 2,801 - 29,032 nt. (total: 26,232 nt) Show pHMM detection rules used

Glycine_reductase: (minimum(3, [ACP_syn_III, ACP_syn_III_C, FA_synthesis, GRDA, GRDB]) and Glycine_reductase and not Pro_racemase)

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c00012_NZ_CCAT.. - Region 2 - Others_HGD_unassigned

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Location: 46,409 - 70,689 nt. (total: 24,281 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

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c00016_NZ_CCAT.. - Region 1 - Arginine2_Hcarbonate

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Location: 10,696 - 29,512 nt. (total: 18,817 nt) Show pHMM detection rules used

Region on contig edge.

Arginine2_Hcarbonate: (Amidinotransf and OTCace and OTCace_N and AA_kinase)

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c00021_NZ_CCAT.. - Region 1 - acetate2butyrate

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Location: 1,144 - 26,251 nt. (total: 25,108 nt) Show pHMM detection rules used

acetate2butyrate: (not (POR or POR_N or PFOR_II) and minimum(4, [Acyl-CoA_dh_1, Acyl-CoA_dh_2, ECH_2, ETF, ETF_alpha, HCDH_N, Thiolase_N, ketoacyl-synt]) and HCDH and minimum(1, [EC1_2-faecali, ECH1_Enoyl_CoA_DH1, ECH1_Enoyl_CoA_DH2, ECH1_Enoyl_CoA_DH3, ECH1_Enoyl_CoA_DH4, Thiolase_C]))

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c00033_NZ_CCAT.. - Region 1 - Rnf_complex

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Location: 96,796 - 121,914 nt. (total: 25,119 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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c00033_NZ_CCAT.. - Region 2 - OD_aldehydes_related,OD_eut_pdu_related,OD_fatty_acids,aminobutyrate2Butyrate

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Location: 259,287 - 303,776 nt. (total: 44,490 nt) Show pHMM detection rules used

OD_fatty_acids: (minimum(1, [PFOR_II, POR, POR_N]) and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))
OD_eut_pdu_related: (minimum(1, [PFOR_II, POR, POR_N]) and minimum(2, [Aldedh, EutN_CcmL, EutQ, Fe-ADH, Fe-ADH_2, PTAC, PduV-EutP]) and not (Gly_radical or Gly_430_pcre or Gly_8-9_TMA))
OD_aldehydes_related: (minimum(1, [PFOR_II, POR, POR_N]) and minimum(1, [AFOR_C, AFOR_N, Aldedh]) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))
aminobutyrate2Butyrate: (minimum(2, [AcetylCoA_hyd_C, AcetylCoA_hydro, Fe-ADH, Fe-ADH_2, HBT, Mal_decarbox_Al]) and cds(HpaB_N and HpaB) and not (LAM_C or BKACE))

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c00034_NZ_CCAT.. - Region 1 - OD_fatty_acids,porA

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Location: 58,883 - 85,758 nt. (total: 26,876 nt) Show pHMM detection rules used

OD_fatty_acids: (minimum(1, [PFOR_II, POR, POR_N]) and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))
porA: (Fer4_7 and TPP_enzyme_C and POR and POR_N and PFOR_II and not (EKR or Fer4_16))

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c00035_NZ_CCAT.. - Region 1 - Others_HGD_unassigned

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Location: 12,841 - 34,782 nt. (total: 21,942 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

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c00035_NZ_CCAT.. - Region 2 - p-cresol

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Location: 70,012 - 93,908 nt. (total: 23,897 nt) Show pHMM detection rules used

p-cresol: (PFL_6_pcresol and (Gly_430_pcre or Gly_radical) and hpdC and Radical_SAM and not NRDD)

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c00049_NZ_CCAT.. - Region 1 - Others_HGD_unassigned

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Location: 221,427 - 244,343 nt. (total: 22,917 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

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c00050_NZ_CCAT.. - Region 1 - TMA

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Location: 1 - 23,407 nt. (total: 23,407 nt) Show pHMM detection rules used

Region on contig edge.

TMA: (minimum(2, [Aldedh, BMC, PduV-EutP, Radical_SAM]) and PFL_9_tma and Gly_8-9_TMA and not NRDD)

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c00052_NZ_CCAT.. - Region 1 - PFOR_II_pathway

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Location: 195,862 - 211,220 nt. (total: 15,359 nt) Show pHMM detection rules used

Region on contig edge.

PFOR_II_pathway: cds(POR and POR_N and PFOR_II and EKR and Fer4_16 and TPP_enzyme_C)

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c00055_NZ_CCAT.. - Region 1 - EUT_pathway

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Location: 1 - 34,062 nt. (total: 34,062 nt) Show pHMM detection rules used

Region on contig edge.

EUT_pathway: (minimum(3, [Aldedh, BMC, Cob_adeno_trans, EutA, EutH, EutK_C, EutN_CcmL, EutQ, Fe-ADH, Fe-ADH_2, Malic_M, MreB_Mbl, PTA_PTB, PduV-EutP, malic]) and EutB and EutC)

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c00069_NZ_CCAT.. - Region 1 - Glycine_cleavage

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Location: 88,549 - 112,882 nt. (total: 24,334 nt) Show pHMM detection rules used

Glycine_cleavage: (minimum(2, [Aminotran_5, GCV_H, GCV_T, GDC-P, SoxG]) and GCV_H and GCV_T_C)

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c00069_NZ_CCAT.. - Region 2 - Hydroxy-L-proline2proline,PFOR_II_pathway

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Location: 147,943 - 191,544 nt. (total: 43,602 nt) Show pHMM detection rules used

PFOR_II_pathway: cds(POR and POR_N and PFOR_II and EKR and Fer4_16 and TPP_enzyme_C)
Hydroxy-L-proline2proline: ((PFL_proline or cds(PFL-like and Gly_radical)) and Radical_SAM and P5CR_dimer and F420_oxidored)

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c00069_NZ_CCAT.. - Region 3 - OD_AA_metabolism

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Location: 284,594 - 315,439 nt. (total: 30,846 nt) Show pHMM detection rules used

OD_AA_metabolism: (minimum(1, [PFOR_II, POR, POR_N]) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (Gly_radical_scatole or Gly_radical or Gly_430_pcre or Gly_8-9_TMA))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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No matches found.

c00071_NZ_CCAT.. - Region 1 - proline2aminovalerate

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Location: 213,045 - 236,945 nt. (total: 23,901 nt) Show pHMM detection rules used

Region on contig edge.

proline2aminovalerate: (Proline_reductase and (Pro_racemase or GRDB) and not ACP_syn_III_C)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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c00073_NZ_CCAT.. - Region 1 - Lysine_degradation

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Location: 20,429 - 49,669 nt. (total: 29,241 nt) Show pHMM detection rules used

Lysine_degradation: (minimum(1, [AcetylCoA_hydro, CoA_trans, HBT, Lys-AminoMut_A]) and BKACE and LAM_C and Radical_SAM and B12-binding and OAM_dimer)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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c00075_NZ_CCAT.. - Region 1 - Pyruvate2acetate-formate

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Location: 11,460 - 34,568 nt. (total: 23,109 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

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