GCF_958477315.1_SRR17382081_bin.77_MetaWRAP_v1.3_MAG_genomic - 6 region(s)

Identified primary metabolite regions

c00002_NZ_CAUE.. (original name was: NZ_CAUEFJ010000002.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	Rnf_complex	E-MGC	1	19,694	Rnf complex C. sporogenes	RNF	83%

c00004_NZ_CAUE.. (original name was: NZ_CAUEFJ010000004.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 4.1	TPP_AA_metabolism	Putative	23,838	51,714

c00009_NZ_CAUE.. (original name was: NZ_CAUEFJ010000009.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 9.1	Putrescine2spermidine	Aliphatic_amine	11,072	34,311	Putrescine2spermidine E. rectale	SPRM	100%

c00014_NZ_CAUE.. (original name was: NZ_CAUEFJ010000014.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 14.1	Pyruvate2acetate-formate	SCFA	1	21,132	Threonine to propionate E. coli	PROP	30%

c00017_NZ_CAUE.. (original name was: NZ_CAUEFJ010000017.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	GR_fatty_acids	Putative	14,979	40,514	Trimethylamine synthesis C. sporogenes	TMA	33%

c00050_NZ_CAUE.. (original name was: NZ_CAUEFJ010000050.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 50.1	Others_HGD_unassigned	Putative	1	13,498

No primary metabolite regions were found in these records:: c00001_NZ_CAUE.. (original name was: NZ_CAUEFJ010000001.1); c00003_NZ_CAUE.. (original name was: NZ_CAUEFJ010000003.1); c00005_NZ_CAUE.. (original name was: NZ_CAUEFJ010000005.1); c00006_NZ_CAUE.. (original name was: NZ_CAUEFJ010000006.1); c00007_NZ_CAUE.. (original name was: NZ_CAUEFJ010000007.1); c00008_NZ_CAUE.. (original name was: NZ_CAUEFJ010000008.1); c00010_NZ_CAUE.. (original name was: NZ_CAUEFJ010000010.1); c00011_NZ_CAUE.. (original name was: NZ_CAUEFJ010000011.1); c00012_NZ_CAUE.. (original name was: NZ_CAUEFJ010000012.1); c00013_NZ_CAUE.. (original name was: NZ_CAUEFJ010000013.1); c00015_NZ_CAUE.. (original name was: NZ_CAUEFJ010000015.1); c00016_NZ_CAUE.. (original name was: NZ_CAUEFJ010000016.1); c00018_NZ_CAUE.. (original name was: NZ_CAUEFJ010000018.1); c00019_NZ_CAUE.. (original name was: NZ_CAUEFJ010000019.1); c00020_NZ_CAUE.. (original name was: NZ_CAUEFJ010000020.1); c00021_NZ_CAUE.. (original name was: NZ_CAUEFJ010000021.1); c00022_NZ_CAUE.. (original name was: NZ_CAUEFJ010000022.1); c00023_NZ_CAUE.. (original name was: NZ_CAUEFJ010000023.1); c00024_NZ_CAUE.. (original name was: NZ_CAUEFJ010000024.1); c00025_NZ_CAUE.. (original name was: NZ_CAUEFJ010000025.1); c00026_NZ_CAUE.. (original name was: NZ_CAUEFJ010000026.1); c00027_NZ_CAUE.. (original name was: NZ_CAUEFJ010000027.1); c00028_NZ_CAUE.. (original name was: NZ_CAUEFJ010000028.1); c00029_NZ_CAUE.. (original name was: NZ_CAUEFJ010000029.1); c00030_NZ_CAUE.. (original name was: NZ_CAUEFJ010000030.1); c00031_NZ_CAUE.. (original name was: NZ_CAUEFJ010000031.1); c00032_NZ_CAUE.. (original name was: NZ_CAUEFJ010000032.1); c00033_NZ_CAUE.. (original name was: NZ_CAUEFJ010000033.1); c00034_NZ_CAUE.. (original name was: NZ_CAUEFJ010000034.1); c00035_NZ_CAUE.. (original name was: NZ_CAUEFJ010000035.1); c00036_NZ_CAUE.. (original name was: NZ_CAUEFJ010000036.1); c00037_NZ_CAUE.. (original name was: NZ_CAUEFJ010000037.1); c00038_NZ_CAUE.. (original name was: NZ_CAUEFJ010000038.1); c00039_NZ_CAUE.. (original name was: NZ_CAUEFJ010000039.1); c00040_NZ_CAUE.. (original name was: NZ_CAUEFJ010000040.1); c00041_NZ_CAUE.. (original name was: NZ_CAUEFJ010000041.1); c00042_NZ_CAUE.. (original name was: NZ_CAUEFJ010000042.1); c00043_NZ_CAUE.. (original name was: NZ_CAUEFJ010000043.1); c00044_NZ_CAUE.. (original name was: NZ_CAUEFJ010000044.1); c00045_NZ_CAUE.. (original name was: NZ_CAUEFJ010000045.1); c00046_NZ_CAUE.. (original name was: NZ_CAUEFJ010000046.1); c00047_NZ_CAUE.. (original name was: NZ_CAUEFJ010000047.1); c00048_NZ_CAUE.. (original name was: NZ_CAUEFJ010000048.1); c00049_NZ_CAUE.. (original name was: NZ_CAUEFJ010000049.1); c00051_NZ_CAUE.. (original name was: NZ_CAUEFJ010000051.1); c00052_NZ_CAUE.. (original name was: NZ_CAUEFJ010000052.1); c00053_NZ_CAUE.. (original name was: NZ_CAUEFJ010000053.1); c00054_NZ_CAUE.. (original name was: NZ_CAUEFJ010000054.1); c00055_NZ_CAUE.. (original name was: NZ_CAUEFJ010000055.1); c00056_NZ_CAUE.. (original name was: NZ_CAUEFJ010000056.1); c00057_NZ_CAUE.. (original name was: NZ_CAUEFJ010000057.1); c00058_NZ_CAUE.. (original name was: NZ_CAUEFJ010000058.1); c00059_NZ_CAUE.. (original name was: NZ_CAUEFJ010000059.1); c00060_NZ_CAUE.. (original name was: NZ_CAUEFJ010000060.1); c00061_NZ_CAUE.. (original name was: NZ_CAUEFJ010000061.1); c00062_NZ_CAUE.. (original name was: NZ_CAUEFJ010000062.1); c00063_NZ_CAUE.. (original name was: NZ_CAUEFJ010000063.1); c00064_NZ_CAUE.. (original name was: NZ_CAUEFJ010000064.1); c00065_NZ_CAUE.. (original name was: NZ_CAUEFJ010000065.1); c00066_NZ_CAUE.. (original name was: NZ_CAUEFJ010000066.1); c00067_NZ_CAUE.. (original name was: NZ_CAUEFJ010000067.1); c00068_NZ_CAUE.. (original name was: NZ_CAUEFJ010000068.1); c00069_NZ_CAUE.. (original name was: NZ_CAUEFJ010000069.1); c00070_NZ_CAUE.. (original name was: NZ_CAUEFJ010000070.1); c00071_NZ_CAUE.. (original name was: NZ_CAUEFJ010000071.1); c00072_NZ_CAUE.. (original name was: NZ_CAUEFJ010000072.1); c00073_NZ_CAUE.. (original name was: NZ_CAUEFJ010000073.1); c00074_NZ_CAUE.. (original name was: NZ_CAUEFJ010000074.1); c00075_NZ_CAUE.. (original name was: NZ_CAUEFJ010000075.1); c00076_NZ_CAUE.. (original name was: NZ_CAUEFJ010000076.1); c00077_NZ_CAUE.. (original name was: NZ_CAUEFJ010000077.1); c00078_NZ_CAUE.. (original name was: NZ_CAUEFJ010000078.1); c00079_NZ_CAUE.. (original name was: NZ_CAUEFJ010000079.1); c00080_NZ_CAUE.. (original name was: NZ_CAUEFJ010000080.1); c00081_NZ_CAUE.. (original name was: NZ_CAUEFJ010000081.1); c00082_NZ_CAUE.. (original name was: NZ_CAUEFJ010000082.1); c00083_NZ_CAUE.. (original name was: NZ_CAUEFJ010000083.1); c00084_NZ_CAUE.. (original name was: NZ_CAUEFJ010000084.1); c00085_NZ_CAUE.. (original name was: NZ_CAUEFJ010000085.1); c00086_NZ_CAUE.. (original name was: NZ_CAUEFJ010000086.1); c00087_NZ_CAUE.. (original name was: NZ_CAUEFJ010000087.1); c00088_NZ_CAUE.. (original name was: NZ_CAUEFJ010000088.1); c00089_NZ_CAUE.. (original name was: NZ_CAUEFJ010000089.1); c00090_NZ_CAUE.. (original name was: NZ_CAUEFJ010000090.1); c00091_NZ_CAUE.. (original name was: NZ_CAUEFJ010000091.1); c00092_NZ_CAUE.. (original name was: NZ_CAUEFJ010000092.1); c00093_NZ_CAUE.. (original name was: NZ_CAUEFJ010000093.1); c00094_NZ_CAUE.. (original name was: NZ_CAUEFJ010000094.1); c00095_NZ_CAUE.. (original name was: NZ_CAUEFJ010000095.1); c00096_NZ_CAUE.. (original name was: NZ_CAUEFJ010000096.1); c00097_NZ_CAUE.. (original name was: NZ_CAUEFJ010000097.1); c00098_NZ_CAUE.. (original name was: NZ_CAUEFJ010000098.1); c00099_NZ_CAUE.. (original name was: NZ_CAUEFJ010000099.1); c00100_NZ_CAUE.. (original name was: NZ_CAUEFJ010000100.1); c00101_NZ_CAUE.. (original name was: NZ_CAUEFJ010000101.1); c00102_NZ_CAUE.. (original name was: NZ_CAUEFJ010000102.1); c00103_NZ_CAUE.. (original name was: NZ_CAUEFJ010000103.1); c00104_NZ_CAUE.. (original name was: NZ_CAUEFJ010000104.1); c00105_NZ_CAUE.. (original name was: NZ_CAUEFJ010000105.1); c00106_NZ_CAUE.. (original name was: NZ_CAUEFJ010000106.1); c00107_NZ_CAUE.. (original name was: NZ_CAUEFJ010000107.1); c00108_NZ_CAUE.. (original name was: NZ_CAUEFJ010000108.1); c00109_NZ_CAUE.. (original name was: NZ_CAUEFJ010000109.1); c00110_NZ_CAUE.. (original name was: NZ_CAUEFJ010000110.1); c00111_NZ_CAUE.. (original name was: NZ_CAUEFJ010000111.1); c00112_NZ_CAUE.. (original name was: NZ_CAUEFJ010000112.1); c00113_NZ_CAUE.. (original name was: NZ_CAUEFJ010000113.1); c00114_NZ_CAUE.. (original name was: NZ_CAUEFJ010000114.1); c00115_NZ_CAUE.. (original name was: NZ_CAUEFJ010000115.1); c00116_NZ_CAUE.. (original name was: NZ_CAUEFJ010000116.1)

Compact view

c00002_NZ_CAUE.. - Region 1 - Rnf_complex

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Location: 1 - 19,694 nt. (total: 19,694 nt) Show pHMM detection rules used

Region on contig edge.

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00004_NZ_CAUE.. - Region 1 - TPP_AA_metabolism

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Location: 23,838 - 51,714 nt. (total: 27,877 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00009_NZ_CAUE.. - Region 1 - Putrescine2spermidine

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Location: 11,072 - 34,311 nt. (total: 23,240 nt) Show pHMM detection rules used

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00014_NZ_CAUE.. - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 1 - 21,132 nt. (total: 21,132 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00017_NZ_CAUE.. - Region 1 - GR_fatty_acids

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Location: 14,979 - 40,514 nt. (total: 25,536 nt) Show pHMM detection rules used

Region on contig edge.

GR_fatty_acids: (minimum(1, [Gly_430_pcre, Gly_8-9_TMA, Gly_radical, Gly_radical_scatole, PFL-like, PFL_6_pcresol, PFL_9_tma, PFL_acetate1, PFL_acetate2, PFL_proline, PFL_toluene]) and not NRDD and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00050_NZ_CAUE.. - Region 1 - Others_HGD_unassigned

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Location: 1 - 13,498 nt. (total: 13,498 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.