GCF_900111235.1_IMG-taxon_2675903166_annotated_assembly_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_FOJI01000017 (original name was: NZ_FOJI01000017.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	cyclic-lactone-autoinducer	38,044	58,764

NZ_FOJI01000013 (original name was: NZ_FOJI01000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RRE-containing	80,640	100,930

NZ_FOJI01000002 (original name was: NZ_FOJI01000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	cyclic-lactone-autoinducer	2,391	22,990

NZ_FOJI01000007 (original name was: NZ_FOJI01000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	ranthipeptide	140,608	161,966

NZ_FOJI01000005 (original name was: NZ_FOJI01000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	cyclic-lactone-autoinducer	12,946	33,841

Region	Type	From	To	Similarity
Region 3.1	cyclic-lactone-autoinducer	38,044	58,764
Region 7.1	RRE-containing	80,640	100,930
Region 10.1	cyclic-lactone-autoinducer	2,391	22,990
Region 23.1	ranthipeptide	140,608	161,966
Region 24.1	cyclic-lactone-autoinducer	12,946	33,841

No secondary metabolite regions were found in these records:: NZ_FOJI01000048 (original name was: NZ_FOJI01000048.1); NZ_FOJI01000018 (original name was: NZ_FOJI01000018.1); NZ_FOJI01000008 (original name was: NZ_FOJI01000008.1); NZ_FOJI01000022 (original name was: NZ_FOJI01000022.1); NZ_FOJI01000028 (original name was: NZ_FOJI01000028.1); NZ_FOJI01000004 (original name was: NZ_FOJI01000004.1); NZ_FOJI01000021 (original name was: NZ_FOJI01000021.1); NZ_FOJI01000030 (original name was: NZ_FOJI01000030.1); NZ_FOJI01000041 (original name was: NZ_FOJI01000041.1); NZ_FOJI01000016 (original name was: NZ_FOJI01000016.1); NZ_FOJI01000020 (original name was: NZ_FOJI01000020.1); NZ_FOJI01000001 (original name was: NZ_FOJI01000001.1); NZ_FOJI01000032 (original name was: NZ_FOJI01000032.1); NZ_FOJI01000026 (original name was: NZ_FOJI01000026.1); NZ_FOJI01000006 (original name was: NZ_FOJI01000006.1); NZ_FOJI01000015 (original name was: NZ_FOJI01000015.1); NZ_FOJI01000014 (original name was: NZ_FOJI01000014.1); NZ_FOJI01000011 (original name was: NZ_FOJI01000011.1); NZ_FOJI01000010 (original name was: NZ_FOJI01000010.1); NZ_FOJI01000045 (original name was: NZ_FOJI01000045.1); NZ_FOJI01000009 (original name was: NZ_FOJI01000009.1); NZ_FOJI01000003 (original name was: NZ_FOJI01000003.1); NZ_FOJI01000019 (original name was: NZ_FOJI01000019.1); NZ_FOJI01000042 (original name was: NZ_FOJI01000042.1); NZ_FOJI01000044 (original name was: NZ_FOJI01000044.1); NZ_FOJI01000023 (original name was: NZ_FOJI01000023.1); NZ_FOJI01000031 (original name was: NZ_FOJI01000031.1); NZ_FOJI01000038 (original name was: NZ_FOJI01000038.1); NZ_FOJI01000024 (original name was: NZ_FOJI01000024.1); NZ_FOJI01000025 (original name was: NZ_FOJI01000025.1); NZ_FOJI01000037 (original name was: NZ_FOJI01000037.1); NZ_FOJI01000027 (original name was: NZ_FOJI01000027.1); NZ_FOJI01000029 (original name was: NZ_FOJI01000029.1); NZ_FOJI01000033 (original name was: NZ_FOJI01000033.1); NZ_FOJI01000040 (original name was: NZ_FOJI01000040.1); NZ_FOJI01000034 (original name was: NZ_FOJI01000034.1); NZ_FOJI01000047 (original name was: NZ_FOJI01000047.1); NZ_FOJI01000035 (original name was: NZ_FOJI01000035.1); NZ_FOJI01000039 (original name was: NZ_FOJI01000039.1); NZ_FOJI01000036 (original name was: NZ_FOJI01000036.1); NZ_FOJI01000046 (original name was: NZ_FOJI01000046.1); NZ_FOJI01000012 (original name was: NZ_FOJI01000012.1); NZ_FOJI01000043 (original name was: NZ_FOJI01000043.1)

Compact view

c00003_NZ_FOJI.. - Region 1 - cyclic-lactone-autoinducer

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Location: 38,044 - 58,764 nt. (total: 20,721 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000703.1	0.19	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001521.1	0.14	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0000393.1	0.12	NRP, Polyketide	myxoprincomide-c506	Myxococcus xanthus DK 1622
BGC0000486.1	0.08	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000709.1	0.07	Saccharide	neomycin	Streptomyces fradiae ATCC 10745 = DSM 40063
BGC0000069.1	0.06	Polyketide	gephyronic acid	Archangium violaceum Cb vi76

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000703.1	0.52	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001521.1	0.44	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0000393.1	0.39	NRP, Polyketide	myxoprincomide-c506	Myxococcus xanthus DK 1622
BGC0000486.1	0.32	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000709.1	0.28	Saccharide	neomycin	Streptomyces fradiae ATCC 10745 = DSM 40063
BGC0000069.1	0.26	Polyketide	gephyronic acid	Archangium violaceum Cb vi76

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00007_NZ_FOJI.. - Region 1 - RRE-containing

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Location: 80,640 - 100,930 nt. (total: 20,291 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001120.1	0.17	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001929.1	0.16	RiPP	WGK	Streptococcus ferus
BGC0000504.1	0.15	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001655.1	0.14	RiPP	LP2006	Nocardiopsis alba DSM 43377
BGC0000883.1	0.14	Other	arginomycin	Streptomyces arginensis
BGC0001514.1	0.13	Other	aristeromycin	Streptomyces citricolor
BGC0002005.1	0.13	RiPP	RaxX	Xanthomonas oryzae pv. oryzae
BGC0000906.1	0.13	Other	heme D1	Heliophilum fasciatum
BGC0000703.1	0.13	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001496.1	0.13	RiPP	actinokineosin	Actinokineospora spheciospongiae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001120.1	0.49	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001929.1	0.46	RiPP	WGK	Streptococcus ferus
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001655.1	0.43	RiPP	LP2006	Nocardiopsis alba DSM 43377
BGC0000883.1	0.43	Other	arginomycin	Streptomyces arginensis
BGC0001514.1	0.42	Other	aristeromycin	Streptomyces citricolor
BGC0002005.1	0.42	RiPP	RaxX	Xanthomonas oryzae pv. oryzae
BGC0000906.1	0.42	Other	heme D1	Heliophilum fasciatum
BGC0000703.1	0.42	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001496.1	0.42	RiPP	actinokineosin	Actinokineospora spheciospongiae

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00010_NZ_FOJI.. - Region 1 - cyclic-lactone-autoinducer

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Location: 2,391 - 22,990 nt. (total: 20,600 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	cyclic-lactone-autoinducer	Similarity score	Type	Compound(s)	Organism
BGC0001669.1		0.04	RiPP	microvionin	Microbacterium arborescens

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0001669.1		0.18	RiPP	microvionin	Microbacterium arborescens

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00023_NZ_FOJI.. - Region 1 - ranthipeptide

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Location: 140,608 - 161,966 nt. (total: 21,359 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000846.1	0.27	Other	tabtoxin	Pseudomonas syringae
BGC0000885.1	0.21	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0001387.1	0.17	Other	nucleocidin	Streptomyces calvus
BGC0000937.1	0.16	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0000600.1	0.16	RiPP	thurincin H	Bacillus thuringiensis
BGC0000571.1	0.16	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0000551.1	0.16	RiPP	SapB	Streptomyces coelicolor A3(2)
BGC0001639.1	0.16	RiPP	klebsidin	Klebsiella pneumoniae
BGC0001374.1	0.16	Other	thienodolin	Streptomyces albogriseolus
BGC0000626.1	0.16	RiPP	thuricin	Bacillus thuringiensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000846.1	0.60	Other	tabtoxin	Pseudomonas syringae
BGC0000885.1	0.54	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0001387.1	0.48	Other	nucleocidin	Streptomyces calvus
BGC0000937.1	0.47	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0000600.1	0.47	RiPP	thurincin H	Bacillus thuringiensis
BGC0000571.1	0.47	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0000551.1	0.47	RiPP	SapB	Streptomyces coelicolor A3(2)
BGC0001639.1	0.47	RiPP	klebsidin	Klebsiella pneumoniae
BGC0001374.1	0.46	Other	thienodolin	Streptomyces albogriseolus
BGC0000626.1	0.46	RiPP	thuricin	Bacillus thuringiensis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00024_NZ_FOJI.. - Region 1 - cyclic-lactone-autoinducer

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Location: 12,946 - 33,841 nt. (total: 20,896 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001586.1	0.14	Saccharide	EPS273	Pseudomonas stutzeri
BGC0001686.1	0.10	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0000997.1	0.07	NRP, Polyketide	glidobactin	[Polyangium] brachysporum
BGC0001053.1	0.05	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0000458.1	0.05	NRP	viomycin	Streptomyces vinaceus
BGC0001055.1	0.05	NRP, Polyketide	yersiniabactin	Escherichia coli
BGC0000316.1	0.05	NRP	capreomycin IA, capreomycin IB, capreomycin IIA, capreomycin IIB	Saccharothrix mutabilis subsp. capreolus
BGC0000087.1	0.04	Polyketide	lasalocid	Streptomyces lasaliensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001586.1	0.44	Saccharide	EPS273	Pseudomonas stutzeri
BGC0001686.1	0.35	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0000997.1	0.29	NRP, Polyketide	glidobactin	[Polyangium] brachysporum
BGC0001053.1	0.23	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0000458.1	0.22	NRP	viomycin	Streptomyces vinaceus
BGC0001055.1	0.22	NRP, Polyketide	yersiniabactin	Escherichia coli
BGC0000316.1	0.21	NRP	capreomycin IA, capreomycin IB, capreomycin IIA, capreomycin IIB	Saccharothrix mutabilis subsp. capreolus
BGC0000087.1	0.18	Polyketide	lasalocid	Streptomyces lasaliensis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names