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Overview
1.1
1.2

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_MUXT01000001 (original name was: NZ_MUXT01000001.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | betalactone | 172,532 | 201,921 | plipastatin | NRP | 15%
Region 1.2 | RiPP-like | 405,442 | 416,362 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | betalactone | 172,532 | 201,921 | plipastatin | NRP | 15%
Region 1.2 | RiPP-like | 405,442 | 416,362 |

No secondary metabolite regions were found in these records:
  NZ_MUXT01000002 (original name was: NZ_MUXT01000002.1)
  NZ_MUXT01000003 (original name was: NZ_MUXT01000003.1)
  NZ_MUXT01000004 (original name was: NZ_MUXT01000004.1)
  NZ_MUXT01000005 (original name was: NZ_MUXT01000005.1)
  NZ_MUXT01000006 (original name was: NZ_MUXT01000006.1)
  NZ_MUXT01000007 (original name was: NZ_MUXT01000007.1)
  NZ_MUXT01000008 (original name was: NZ_MUXT01000008.1)
  NZ_MUXT01000009 (original name was: NZ_MUXT01000009.1)
  NZ_MUXT01000010 (original name was: NZ_MUXT01000010.1)
  NZ_MUXT01000011 (original name was: NZ_MUXT01000011.1)
  NZ_MUXT01000012 (original name was: NZ_MUXT01000012.1)
  NZ_MUXT01000014 (original name was: NZ_MUXT01000014.1)
  NZ_MUXT01000015 (original name was: NZ_MUXT01000015.1)
  NZ_MUXT01000017 (original name was: NZ_MUXT01000017.1)
  NZ_MUXT01000018 (original name was: NZ_MUXT01000018.1)
  NZ_MUXT01000019 (original name was: NZ_MUXT01000019.1)

Compact view
c00001_NZ_MUXT.. - Region 1 - betalactone
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 172,532 - 201,921 nt. (total: 29,390 nt) Show pHMM detection rules used
betalactone: (HMGL-like and AMP-binding)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | betalactone | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000662.1 |  | 0.22 | Terpene | grixazone | Streptomyces griseus subsp. griseus NBRC 13350
BGC0000890.1 |  | 0.21 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas phenolica O-BC30
BGC0000891.1 |  | 0.21 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas luteoviolacea 2ta16
BGC0000234.1 |  | 0.21 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0001897.1 |  | 0.20 | Polyketide | cepacin A | Burkholderia ambifaria IOP40-10
BGC0001343.1 |  | 0.20 | Polyketide | aurachin A, aurachin D | Stigmatella aurantiaca Sg a15
BGC0001156.1 |  | 0.18 | Terpene | platencin | Streptomyces platensis
BGC0000632.1 |  | 0.16 | Terpene, Saccharide | brasilicardin A | Nocardia terpenica
BGC0000373.1 |  | 0.16 | NRP | holomycin | Streptomyces clavuligerus ATCC 27064
BGC0001190.1 |  | 0.15 | Polyketide | fusaric acid | Fusarium verticillioides 7600

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000662.1 |  | 0.54 | Terpene | grixazone | Streptomyces griseus subsp. griseus NBRC 13350
BGC0000890.1 |  | 0.54 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas phenolica O-BC30
BGC0000891.1 |  | 0.54 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas luteoviolacea 2ta16
BGC0000234.1 |  | 0.54 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0001897.1 |  | 0.53 | Polyketide | cepacin A | Burkholderia ambifaria IOP40-10
BGC0001343.1 |  | 0.52 | Polyketide | aurachin A, aurachin D | Stigmatella aurantiaca Sg a15
BGC0001156.1 |  | 0.50 | Terpene | platencin | Streptomyces platensis
BGC0000632.1 |  | 0.47 | Terpene, Saccharide | brasilicardin A | Nocardia terpenica
BGC0000373.1 |  | 0.46 | NRP | holomycin | Streptomyces clavuligerus ATCC 27064
BGC0001190.1 |  | 0.46 | Polyketide | fusaric acid | Fusarium verticillioides 7600

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00001_NZ_MUXT.. - Region 2 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 405,442 - 416,362 nt. (total: 10,921 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

No matches found.

No matches found.

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names