GCF_022024215.1_ASM2202421v1_genomic - 6 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP091798.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	arylpolyene	209,270	247,984	flexirubin	Other	8%
Region 1.2	RRE-containing	854,995	875,291
Region 1.3	arylpolyene	1,280,560	1,322,326

NZ_CP091797.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	arylpolyene	336,761	382,325	flexirubin	Polyketide	8%
Region 2.2	LAP	459,778	481,804
Region 2.3	RRE-containing	561,096	581,365

Compact view

NZ_CP091798.1 - Region 1 - arylpolyene

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Location: 209,270 - 247,984 nt. (total: 38,715 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000231.1	0.22	Polyketide	griseusin	Streptomyces griseus
BGC0000234.1	0.21	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001197.1	0.20	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0002008.1	0.20	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0001723.1	0.18	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000204.1	0.18	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0000866.1	0.17	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000221.1	0.15	Polyketide	erdacin	uncultured soil bacterium V167
BGC0000218.1	0.15	Polyketide	doxorubicin	Streptomyces peucetius
BGC0000194.1	0.15	Polyketide	actinorhodin	Streptomyces coelicolor A3(2)

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000231.1	0.54	Polyketide	griseusin	Streptomyces griseus
BGC0000234.1	0.53	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001197.1	0.53	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0002008.1	0.52	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0001723.1	0.50	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000204.1	0.49	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0000866.1	0.48	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000221.1	0.46	Polyketide	erdacin	uncultured soil bacterium V167
BGC0000218.1	0.45	Polyketide	doxorubicin	Streptomyces peucetius
BGC0000194.1	0.45	Polyketide	actinorhodin	Streptomyces coelicolor A3(2)

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP091798.1 - Region 2 - RRE-containing

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Location: 854,995 - 875,291 nt. (total: 20,297 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	RRE-containing	Similarity score	Type	Compound(s)	Organism
BGC0001686.1		0.04	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0000020.1		0.03	Polyketide	maytansine, ansamitocin P-3	Actinosynnema pretiosum subsp. auranticum

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0001686.1		0.17	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0000020.1		0.16	Polyketide	maytansine, ansamitocin P-3	Actinosynnema pretiosum subsp. auranticum

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP091798.1 - Region 3 - arylpolyene

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Location: 1,280,560 - 1,322,326 nt. (total: 41,767 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001895.1	0.18	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0001900.1	0.17	NRP	fragin	Burkholderia cenocepacia H111
BGC0001166.1	0.17	NRP	HC-toxin	Alternaria jesenskae
BGC0001250.1	0.17	NRP	epichloenin A	Epichloe festucae
BGC0001251.1	0.17	NRP	epichloenin A	Epichloe festucae
BGC0000839.1	0.15	Other	flexirubin	Chitinophaga pinensis DSM 2588
BGC0001599.1	0.14	NRP	fragin	Burkholderia cenocepacia H111
BGC0000871.1	0.14	Other (Nucleoside)	VEPE, AEPE, TG-1	Myxococcus xanthus DK 1622
BGC0001609.1	0.13	NRP	gliovirin	Trichoderma virens Gv29-8
BGC0000838.1	0.13	Polyketide	flexirubin	Flavobacterium johnsoniae UW101

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001895.1	0.50	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0001900.1	0.48	NRP	fragin	Burkholderia cenocepacia H111
BGC0001166.1	0.48	NRP	HC-toxin	Alternaria jesenskae
BGC0001250.1	0.48	NRP	epichloenin A	Epichloe festucae
BGC0001251.1	0.48	NRP	epichloenin A	Epichloe festucae
BGC0000839.1	0.46	Other	flexirubin	Chitinophaga pinensis DSM 2588
BGC0001599.1	0.44	NRP	fragin	Burkholderia cenocepacia H111
BGC0000871.1	0.42	Other (Nucleoside)	VEPE, AEPE, TG-1	Myxococcus xanthus DK 1622
BGC0001609.1	0.42	NRP	gliovirin	Trichoderma virens Gv29-8
BGC0000838.1	0.42	Polyketide	flexirubin	Flavobacterium johnsoniae UW101

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP091797.1 - Region 1 - arylpolyene

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Location: 336,761 - 382,325 nt. (total: 45,565 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001075.1	0.22	Terpene, Polyketide	aurachin RE	Rhodococcus erythropolis
BGC0000248.1	0.21	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000272.1	0.21	Polyketide	spore pigment	Streptomyces collinus
BGC0001197.1	0.20	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000234.1	0.19	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000231.1	0.19	Polyketide	griseusin	Streptomyces griseus
BGC0001366.1	0.19	Polyketide	BE-24566B, zunyimycin A	Streptomyces sp. FJS31-2
BGC0000228.1	0.19	Polyketide	granaticin	Streptomyces violaceoruber
BGC0001723.1	0.18	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001927.1	0.17	Other	A-94964	Streptomyces sp.

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001075.1	0.54	Terpene, Polyketide	aurachin RE	Rhodococcus erythropolis
BGC0000248.1	0.54	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000272.1	0.54	Polyketide	spore pigment	Streptomyces collinus
BGC0001197.1	0.52	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000234.1	0.51	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000231.1	0.51	Polyketide	griseusin	Streptomyces griseus
BGC0001366.1	0.51	Polyketide	BE-24566B, zunyimycin A	Streptomyces sp. FJS31-2
BGC0000228.1	0.51	Polyketide	granaticin	Streptomyces violaceoruber
BGC0001723.1	0.49	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001927.1	0.48	Other	A-94964	Streptomyces sp.

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP091797.1 - Region 2 - LAP

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Location: 459,778 - 481,804 nt. (total: 22,027 nt) Show pHMM detection rules used

LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03882 or TIGR03604)) or TIGR03603 or TIGR03602) and not cyanobactin_synth)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000568.1	0.22	RiPP	microcin B17	Escherichia coli
BGC0001173.1	0.18	RiPP	plantazolicin	Bacillus pumilus ATCC 7061
BGC0000569.1	0.17	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0000620.1	0.16	RiPP	lacticin Q	Lactococcus lactis
BGC0001222.1	0.16	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.16	RiPP	gassericin A	Lactobacillus gasseri
BGC0001743.1	0.16	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0000486.1	0.15	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000494.1	0.15	RiPP	uberolysin	Streptococcus uberis
BGC0001579.1	0.15	RiPP	duramycin	Streptomyces cinnamoneus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000568.1	0.55	RiPP	microcin B17	Escherichia coli
BGC0001173.1	0.49	RiPP	plantazolicin	Bacillus pumilus ATCC 7061
BGC0000569.1	0.49	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0000620.1	0.46	RiPP	lacticin Q	Lactococcus lactis
BGC0001222.1	0.46	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.46	RiPP	gassericin A	Lactobacillus gasseri
BGC0001743.1	0.46	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0000486.1	0.46	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000494.1	0.45	RiPP	uberolysin	Streptococcus uberis
BGC0001579.1	0.45	RiPP	duramycin	Streptomyces cinnamoneus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP091797.1 - Region 3 - RRE-containing

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Location: 561,096 - 581,365 nt. (total: 20,270 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

No matches found.

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names