GCF_902363055.1_MGYG-HGUT-00084_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00004_NZ_CABI.. (original name was: NZ_CABIYV010000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	thioamide-NRP	37,504	87,375

c00005_NZ_CABI.. (original name was: NZ_CABIYV010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	cyclic-lactone-autoinducer	204,340	224,894

c00010_NZ_CABI.. (original name was: NZ_CABIYV010000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	ranthipeptide	61,900	83,681

Region	Type	From	To	Similarity
Region 4.1	thioamide-NRP	37,504	87,375
Region 5.1	cyclic-lactone-autoinducer	204,340	224,894
Region 10.1	ranthipeptide	61,900	83,681

No secondary metabolite regions were found in these records:: c00001_NZ_CABI.. (original name was: NZ_CABIYV010000001.1); c00002_NZ_CABI.. (original name was: NZ_CABIYV010000002.1); c00003_NZ_CABI.. (original name was: NZ_CABIYV010000003.1); c00006_NZ_CABI.. (original name was: NZ_CABIYV010000006.1); c00007_NZ_CABI.. (original name was: NZ_CABIYV010000007.1); c00008_NZ_CABI.. (original name was: NZ_CABIYV010000008.1); c00009_NZ_CABI.. (original name was: NZ_CABIYV010000009.1); c00011_NZ_CABI.. (original name was: NZ_CABIYV010000011.1); c00012_NZ_CABI.. (original name was: NZ_CABIYV010000012.1); c00013_NZ_CABI.. (original name was: NZ_CABIYV010000013.1); c00014_NZ_CABI.. (original name was: NZ_CABIYV010000014.1); c00015_NZ_CABI.. (original name was: NZ_CABIYV010000015.1); c00016_NZ_CABI.. (original name was: NZ_CABIYV010000016.1); c00017_NZ_CABI.. (original name was: NZ_CABIYV010000017.1); c00018_NZ_CABI.. (original name was: NZ_CABIYV010000018.1); c00019_NZ_CABI.. (original name was: NZ_CABIYV010000019.1); c00020_NZ_CABI.. (original name was: NZ_CABIYV010000020.1); c00021_NZ_CABI.. (original name was: NZ_CABIYV010000021.1)

Compact view

c00004_NZ_CABI.. - Region 1 - thioamide-NRP

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Location: 37,504 - 87,375 nt. (total: 49,872 nt) Show pHMM detection rules used

thioamide-NRP: (ATP-grasp and AMP-binding and PP-binding and (DUF98 or Orn_Arg_deC_N or Orn_DAP_Arg_deC))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000926.1	0.22	Other	rhizocticin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001483.1	0.21	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0000343.1	0.21	NRP	enterobactin	Pseudomonas sp. J465
BGC0001302.1	0.21	Other	lomofungin	Streptomyces lomondensis
BGC0000253.1	0.21	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001148.1	0.20	NRP, RiPP	pheganomycin	Streptomyces cirratus
BGC0000258.1	0.19	Polyketide	prodigiosin	Serratia sp.
BGC0000259.1	0.19	Polyketide	prodigiosin	Serratia marcescens
BGC0001739.1	0.19	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000843.1	0.19	Other (Non-NRP beta-lactam)	alanylclavam, 2-hydroxymethylclavam, 2-formyloxymethylclavam, clavam-2-carboxylate	Streptomyces clavuligerus ATCC 27064

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000926.1	0.54	Other	rhizocticin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001483.1	0.54	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0000343.1	0.54	NRP	enterobactin	Pseudomonas sp. J465
BGC0001302.1	0.54	Other	lomofungin	Streptomyces lomondensis
BGC0000253.1	0.54	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001148.1	0.53	NRP, RiPP	pheganomycin	Streptomyces cirratus
BGC0000258.1	0.52	Polyketide	prodigiosin	Serratia sp.
BGC0000259.1	0.52	Polyketide	prodigiosin	Serratia marcescens
BGC0001739.1	0.51	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000843.1	0.51	Other (Non-NRP beta-lactam)	alanylclavam, 2-hydroxymethylclavam, 2-formyloxymethylclavam, clavam-2-carboxylate	Streptomyces clavuligerus ATCC 27064

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00005_NZ_CABI.. - Region 1 - cyclic-lactone-autoinducer

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Location: 204,340 - 224,894 nt. (total: 20,555 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000620.1	0.16	RiPP	lacticin Q	Lactococcus lactis
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000522.1	0.16	RiPP	lacticin Z	Lactococcus lactis
BGC0001222.1	0.16	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.16	RiPP	gassericin A	Lactobacillus gasseri
BGC0001684.1	0.15	Other	N-acyloxyacyl glutamine	Klebsiella variicola
BGC0000703.1	0.15	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000243.1	0.14	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001540.1	0.14	Other	CC-1065	Streptomyces zelensis
BGC0000928.1	0.14	Other	T3 toxin	Cylindrospermopsis raciborskii T3

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000620.1	0.46	RiPP	lacticin Q	Lactococcus lactis
BGC0000616.1	0.46	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000522.1	0.46	RiPP	lacticin Z	Lactococcus lactis
BGC0001222.1	0.46	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.46	RiPP	gassericin A	Lactobacillus gasseri
BGC0001684.1	0.45	Other	N-acyloxyacyl glutamine	Klebsiella variicola
BGC0000703.1	0.45	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000243.1	0.44	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001540.1	0.44	Other	CC-1065	Streptomyces zelensis
BGC0000928.1	0.44	Other	T3 toxin	Cylindrospermopsis raciborskii T3

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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c00010_NZ_CABI.. - Region 1 - ranthipeptide

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Location: 61,900 - 83,681 nt. (total: 21,782 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000913.1	0.15	Other	MK-8	Enterobacter cloacae
BGC0000599.1	0.14	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0001314.1	0.13	Terpene	tirucalla	Arabidopsis thaliana
BGC0000897.1	0.12	Other	dehydrophos	Streptomyces luridus
BGC0000813.1	0.10	Alkaloid	K-252a	Nonomuraea longicatena
BGC0000723.1	0.09	Saccharide	β-D-galactosylvalidoxylamine-A	Streptomyces hygroscopicus subsp. limoneus
BGC0000219.1	0.09	Polyketide, Saccharide	elloramycin	Streptomyces olivaceus
BGC0000722.1	0.08	Other (Cyclitol), Polyketide	validamycin A	Streptomyces hygroscopicus subsp. jinggangensis
BGC0000433.1	0.07	NRP	surfactin	Bacillus velezensis FZB42
BGC0000814.1	0.06	Alkaloid	K-252a	Nonomuraea longicatena

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000913.1	0.45	Other	MK-8	Enterobacter cloacae
BGC0000599.1	0.43	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0001314.1	0.42	Terpene	tirucalla	Arabidopsis thaliana
BGC0000897.1	0.40	Other	dehydrophos	Streptomyces luridus
BGC0000813.1	0.37	Alkaloid	K-252a	Nonomuraea longicatena
BGC0000723.1	0.34	Saccharide	β-D-galactosylvalidoxylamine-A	Streptomyces hygroscopicus subsp. limoneus
BGC0000219.1	0.33	Polyketide, Saccharide	elloramycin	Streptomyces olivaceus
BGC0000722.1	0.31	Other (Cyclitol), Polyketide	validamycin A	Streptomyces hygroscopicus subsp. jinggangensis
BGC0000433.1	0.27	NRP	surfactin	Bacillus velezensis FZB42
BGC0000814.1	0.25	Alkaloid	K-252a	Nonomuraea longicatena

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names