GCF_003846135.1_ASM384613v1_genomic - 7 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_RHHM01000002 (original name was: NZ_RHHM01000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	NRPS	178,325	221,576	s56-p1	NRP	11%

NZ_RHHM01000022 (original name was: NZ_RHHM01000022.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	T1PKS,NRPS	1	51,326	yersiniabactin	NRP + Polyketide	17%

NZ_RHHM01000003 (original name was: NZ_RHHM01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	siderophore	178,569	190,923	desferrioxamine E	Other	100%

NZ_RHHM01000004 (original name was: NZ_RHHM01000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	hserlactone	146,214	166,846

NZ_RHHM01000007 (original name was: NZ_RHHM01000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	hserlactone	1	15,910
Region 40.2	thiopeptide	92,016	118,276	O-antigen	Saccharide	14%
Region 40.3	NRPS-like	189,393	233,283	indigoidine	NRP	80%

No secondary metabolite regions were found in these records:: NZ_RHHM01000001 (original name was: NZ_RHHM01000001.1); NZ_RHHM01000010 (original name was: NZ_RHHM01000010.1); NZ_RHHM01000011 (original name was: NZ_RHHM01000011.1); NZ_RHHM01000012 (original name was: NZ_RHHM01000012.1); NZ_RHHM01000013 (original name was: NZ_RHHM01000013.1); NZ_RHHM01000014 (original name was: NZ_RHHM01000014.1); NZ_RHHM01000015 (original name was: NZ_RHHM01000015.1); NZ_RHHM01000016 (original name was: NZ_RHHM01000016.1); NZ_RHHM01000017 (original name was: NZ_RHHM01000017.1); NZ_RHHM01000018 (original name was: NZ_RHHM01000018.1); NZ_RHHM01000019 (original name was: NZ_RHHM01000019.1); NZ_RHHM01000020 (original name was: NZ_RHHM01000020.1); NZ_RHHM01000021 (original name was: NZ_RHHM01000021.1); NZ_RHHM01000023 (original name was: NZ_RHHM01000023.1); NZ_RHHM01000024 (original name was: NZ_RHHM01000024.1); NZ_RHHM01000025 (original name was: NZ_RHHM01000025.1); NZ_RHHM01000026 (original name was: NZ_RHHM01000026.1); NZ_RHHM01000027 (original name was: NZ_RHHM01000027.1); NZ_RHHM01000028 (original name was: NZ_RHHM01000028.1); NZ_RHHM01000029 (original name was: NZ_RHHM01000029.1); NZ_RHHM01000030 (original name was: NZ_RHHM01000030.1); NZ_RHHM01000031 (original name was: NZ_RHHM01000031.1); NZ_RHHM01000032 (original name was: NZ_RHHM01000032.1); NZ_RHHM01000033 (original name was: NZ_RHHM01000033.1); NZ_RHHM01000034 (original name was: NZ_RHHM01000034.1); NZ_RHHM01000035 (original name was: NZ_RHHM01000035.1); NZ_RHHM01000036 (original name was: NZ_RHHM01000036.1); NZ_RHHM01000037 (original name was: NZ_RHHM01000037.1); NZ_RHHM01000038 (original name was: NZ_RHHM01000038.1); NZ_RHHM01000039 (original name was: NZ_RHHM01000039.1); NZ_RHHM01000040 (original name was: NZ_RHHM01000040.1); NZ_RHHM01000041 (original name was: NZ_RHHM01000041.1); NZ_RHHM01000042 (original name was: NZ_RHHM01000042.1); NZ_RHHM01000005 (original name was: NZ_RHHM01000005.1); NZ_RHHM01000006 (original name was: NZ_RHHM01000006.1); NZ_RHHM01000008 (original name was: NZ_RHHM01000008.1); NZ_RHHM01000009 (original name was: NZ_RHHM01000009.1)

Compact view

c00012_NZ_RHHM.. - Region 1 - NRPS

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Location: 178,325 - 221,576 nt. (total: 43,252 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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NRPS/PKS domains

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KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000343.1	0.25	NRP	enterobactin	Pseudomonas sp. J465
BGC0001334.1	0.25	Alkaloid	caldoniamide A, cladoniamide B, cladoniamide C7, cladoniamide D, cladoniamide E, cladoniamide F, cladoniamide G	Streptomyces uncialis
BGC0001224.1	0.23	Other	reductasporine	uncultured bacterium
BGC0000890.1	0.23	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0001336.1	0.23	Alkaloid	erdasporine A, erdasporine B, erdasporine C	uncultured bacterium
BGC0001465.1	0.23	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0001561.1	0.22	NRP	curacomycin	Streptomyces curacoi
BGC0001479.1	0.21	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001641.1	0.21	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001483.1	0.21	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000343.1	0.59	NRP	enterobactin	Pseudomonas sp. J465
BGC0001334.1	0.58	Alkaloid	caldoniamide A, cladoniamide B, cladoniamide C7, cladoniamide D, cladoniamide E, cladoniamide F, cladoniamide G	Streptomyces uncialis
BGC0001224.1	0.57	Other	reductasporine	uncultured bacterium
BGC0000890.1	0.56	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0001336.1	0.56	Alkaloid	erdasporine A, erdasporine B, erdasporine C	uncultured bacterium
BGC0001465.1	0.56	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0001561.1	0.54	NRP	curacomycin	Streptomyces curacoi
BGC0001479.1	0.54	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001641.1	0.54	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001483.1	0.54	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8

Similar known gene clusters

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Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 178324 - 221576:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg12_192

Search NORINE for peptide: strict or relaxed

AMP-binding (25..391): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: lqymWGGIvK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 50% (weak)

ctg12_193

Search NORINE for peptide: strict or relaxed

AMP-binding (513..901): cys

NRPSPredictor2: cys

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLwNMSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 90% (moderate)

c00015_NZ_RHHM.. - Region 1 - NRPS,T1PKS

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Location: 1 - 51,326 nt. (total: 51,326 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000467.1	0.99	NRP	yersiniabactin	Yersinia enterocolitica
BGC0000373.1	0.50	NRP	holomycin	Streptomyces clavuligerus ATCC 27064
BGC0001444.1	0.46	Other	caboxamycin	Streptomyces sp. NTK 937
BGC0001538.1	0.46	NRP, Polyketide	caboxamycin	Streptomyces sp. NTK 937
BGC0001560.1	0.45	NRP, Polyketide	cryptomaldamide	Moorea producens JHB
BGC0001415.1	0.44	NRP	althiomycin	Serratia marcescens subsp. marcescens Db11
BGC0001135.1	0.42	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001699.1	0.41	Polyketide	nidulanin A	Aspergillus nidulans FGSC A4
BGC0000955.1	0.41	NRP, Polyketide	althiomycin	Myxococcus xanthus
BGC0001767.1	0.41	NRP	salinichelins	Salinispora pacifica CNY331

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000467.1	0.78	NRP	yersiniabactin	Yersinia enterocolitica
BGC0000373.1	0.59	NRP	holomycin	Streptomyces clavuligerus ATCC 27064
BGC0001444.1	0.58	Other	caboxamycin	Streptomyces sp. NTK 937
BGC0001538.1	0.58	NRP, Polyketide	caboxamycin	Streptomyces sp. NTK 937
BGC0001560.1	0.56	NRP, Polyketide	cryptomaldamide	Moorea producens JHB
BGC0001415.1	0.55	NRP	althiomycin	Serratia marcescens subsp. marcescens Db11
BGC0000225.1	0.54	Polyketide	frenolicin B	Streptomyces roseofulvus
BGC0001135.1	0.54	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001699.1	0.53	Polyketide	nidulanin A	Aspergillus nidulans FGSC A4
BGC0001726.1	0.53	NRP, Polyketide	pactamides	Streptomyces pactum

Similar known gene clusters

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Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 51326:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys) + (Me-ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg15_19

Search NORINE for peptide: strict or relaxed

AMP-binding (22..425): dhb

NRPSPredictor2: dhb

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: dhb, sal
Small clusters prediction:: dhb, sal
Single AA prediction:: dhb

Stachelhaus prediction details:

Stachelhaus sequence:: tLPAQGVLCK
Nearest Stachelhaus code:: dhb
Stachelhaus code match:: 90% (moderate)

ctg15_22

PKS_AT (540..834): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; 2-Rhyd-Malonyl-CoA: 62.5%; inactive: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 118.5
Methoxymalonyl-CoA: 54.9
Methylmalonyl-CoA: 45.9
Isobutyryl-CoA: 43.9
inactive: 41.9
Propionyl-CoA: 37.1
fatty_acid: 23.8
Benzoyl-CoA: 22.6
2-Methylbutyryl-CoA: 17.1
Ethylmalonyl-CoA: 15.0
CHC-CoA: 14.8
Acetyl-CoA: 14.0
3-Methylbutyryl-CoA: 12.6
trans-1,2-CPDA: 0.0

ctg15_23

Search NORINE for peptide: strict or relaxed

AMP-binding (524..919): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNMSMIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

c00023_NZ_RHHM.. - Region 1 - siderophore

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Location: 178,569 - 190,923 nt. (total: 12,355 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001572.1	0.62	Other	desferrioxamine E	Pantoea agglomerans
BGC0001478.1	0.30	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.28	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000940.1	0.27	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0001453.1	0.27	Other	desferrioxamine	Streptomyces argillaceus
BGC0000295.1	0.20	NRP	acinetoferrin	Acinetobacter haemolyticus
BGC0001870.1	0.19	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0001499.1	0.19	Other	aerobactin	Pantoea ananatis
BGC0001713.1	0.19	Other	ochrobactin	Ochrobactrum anthropi
BGC0001498.1	0.17	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001572.1	0.85	Other	desferrioxamine E	Pantoea agglomerans
BGC0001478.1	0.64	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.62	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000940.1	0.60	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0001453.1	0.60	Other	desferrioxamine	Streptomyces argillaceus
BGC0000295.1	0.52	NRP	acinetoferrin	Acinetobacter haemolyticus
BGC0001870.1	0.51	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0001499.1	0.51	Other	aerobactin	Pantoea ananatis
BGC0001713.1	0.51	Other	ochrobactin	Ochrobactrum anthropi
BGC0001498.1	0.48	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00033_NZ_RHHM.. - Region 1 - hserlactone

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Location: 146,214 - 166,846 nt. (total: 20,633 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

Legend:

core biosynthetic genes

additional biosynthetic genes

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001127.1	0.08	NRP	jagaricin	Janthinobacterium agaricidamnosum
BGC0000344.1	0.06	NRP	entolysin	Pseudomonas entomophila L48
BGC0000135.1	0.05	Polyketide	reveromycin A	Streptomyces sp. SN-593

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001120.1	0.46	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001127.1	0.30	NRP	jagaricin	Janthinobacterium agaricidamnosum
BGC0000344.1	0.26	NRP	entolysin	Pseudomonas entomophila L48
BGC0000135.1	0.21	Polyketide	reveromycin A	Streptomyces sp. SN-593

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00040_NZ_RHHM.. - Region 1 - hserlactone

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Location: 1 - 15,910 nt. (total: 15,910 nt) Show pHMM detection rules used

Region on contig edge.

hserlactone: Autoind_synth

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000896.1	0.17	Other	cycloserine	Streptomyces lavendulae subsp. lavendulae
BGC0000016.1	0.15	Other	amphotericin B	Streptomyces nodosus
BGC0000528.1	0.12	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000926.1	0.08	Other	rhizocticin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001669.1	0.08	RiPP	microvionin	Microbacterium arborescens
BGC0000048.1	0.08	Polyketide	dothistromin	Dothistroma septosporum
BGC0000197.1	0.08	Polyketide, Saccharide	aranciamycin	Streptomyces echinatus
BGC0001650.1	0.07	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes
BGC0001674.1	0.06	RiPP	MS-271	Streptomyces mirabilis
BGC0001921.1	0.06	Other	MS-271	Streptomyces sp.

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000896.1	0.48	Other	cycloserine	Streptomyces lavendulae subsp. lavendulae
BGC0000016.1	0.45	Other	amphotericin B	Streptomyces nodosus
BGC0000528.1	0.40	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000926.1	0.32	Other	rhizocticin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001669.1	0.30	RiPP	microvionin	Microbacterium arborescens
BGC0000048.1	0.30	Polyketide	dothistromin	Dothistroma septosporum
BGC0000197.1	0.30	Polyketide, Saccharide	aranciamycin	Streptomyces echinatus
BGC0001650.1	0.28	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes
BGC0001674.1	0.27	RiPP	MS-271	Streptomyces mirabilis
BGC0001921.1	0.27	Other	MS-271	Streptomyces sp.

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00040_NZ_RHHM.. - Region 2 - thiopeptide

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Location: 92,016 - 118,276 nt. (total: 26,261 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

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MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000784.1	0.24	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000781.1	0.16	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0001285.1	0.07	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0000981.1	0.06	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E6
BGC0001302.1	0.05	Other	lomofungin	Streptomyces lomondensis
BGC0002012.1	0.05	Polyketide	julichrome Q3-3, julichrome Q3-5	Streptomyces afghaniensis 772
BGC0001283.1	0.05	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0000957.1	0.04	NRP, Polyketide	mycotrienin I	Streptomyces sp. XZQH13
BGC0000123.1	0.03	Polyketide	phoslactomycin B	Streptomyces sp. HK803

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000784.1	0.58	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000781.1	0.47	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0001285.1	0.29	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0000981.1	0.24	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E6
BGC0001302.1	0.24	Other	lomofungin	Streptomyces lomondensis
BGC0002012.1	0.23	Polyketide	julichrome Q3-3, julichrome Q3-5	Streptomyces afghaniensis 772
BGC0001283.1	0.22	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0000957.1	0.19	NRP, Polyketide	mycotrienin I	Streptomyces sp. XZQH13
BGC0000123.1	0.15	Polyketide	phoslactomycin B	Streptomyces sp. HK803

Similar known gene clusters

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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Thiopeptides

Core peptide predictions

No core peptides found.

c00040_NZ_RHHM.. - Region 3 - NRPS-like

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Location: 189,393 - 233,283 nt. (total: 43,891 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000375.1	0.23	NRP	indigoidine	Streptomyces chromofuscus
BGC0000427.1	0.22	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0000774.1	0.21	Saccharide	lipopolysaccharide	Xanthomonas campestris pv. campestris
BGC0001399.1	0.21	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001778.1	0.19	Other	showdomycin	Streptomyces showdoensis
BGC0001615.1	0.18	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0001833.1	0.18	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001873.1	0.18	NRP	pyrrolizixenamide A	Xenorhabdus szentirmaii DSM 16338
BGC0001128.1	0.18	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001844.1	0.18	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000375.1	0.56	NRP	indigoidine	Streptomyces chromofuscus
BGC0000427.1	0.55	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0000774.1	0.54	Saccharide	lipopolysaccharide	Xanthomonas campestris pv. campestris
BGC0001399.1	0.53	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001778.1	0.50	Other	showdomycin	Streptomyces showdoensis
BGC0001615.1	0.50	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0001833.1	0.50	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001873.1	0.50	NRP	pyrrolizixenamide A	Xenorhabdus szentirmaii DSM 16338
BGC0001128.1	0.50	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001844.1	0.50	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454

Similar known gene clusters

Module view

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Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 3, location 189392 - 233283:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg40_178

Search NORINE for peptide: strict or relaxed

AMP-binding (31..433): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAWQFGLInK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)