GCF_003026895.1_ASM302689v1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_PYOV01000010 (original name was: NZ_PYOV01000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	52,948	63,811

NZ_PYOV01000002 (original name was: NZ_PYOV01000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	arylpolyene,ectoine	62,182	105,810	APE Vf	Other	95%

NZ_PYOV01000003 (original name was: NZ_PYOV01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	siderophore	1	10,716

NZ_PYOV01000004 (original name was: NZ_PYOV01000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	terpene	113,411	135,450

NZ_PYOV01000009 (original name was: NZ_PYOV01000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	betalactone	48,644	75,787

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RiPP-like	52,948	63,811
Region 12.1	arylpolyene,ectoine	62,182	105,810	APE Vf	Other	95%
Region 15.1	siderophore	1	10,716
Region 16.1	terpene	113,411	135,450
Region 21.1	betalactone	48,644	75,787

No secondary metabolite regions were found in these records:: NZ_PYOV01000001 (original name was: NZ_PYOV01000001.1); NZ_PYOV01000011 (original name was: NZ_PYOV01000011.1); NZ_PYOV01000012 (original name was: NZ_PYOV01000012.1); NZ_PYOV01000013 (original name was: NZ_PYOV01000013.1); NZ_PYOV01000014 (original name was: NZ_PYOV01000014.1); NZ_PYOV01000015 (original name was: NZ_PYOV01000015.1); NZ_PYOV01000016 (original name was: NZ_PYOV01000016.1); NZ_PYOV01000017 (original name was: NZ_PYOV01000017.1); NZ_PYOV01000018 (original name was: NZ_PYOV01000018.1); NZ_PYOV01000019 (original name was: NZ_PYOV01000019.1); NZ_PYOV01000020 (original name was: NZ_PYOV01000020.1); NZ_PYOV01000021 (original name was: NZ_PYOV01000021.1); NZ_PYOV01000005 (original name was: NZ_PYOV01000005.1); NZ_PYOV01000006 (original name was: NZ_PYOV01000006.1); NZ_PYOV01000007 (original name was: NZ_PYOV01000007.1); NZ_PYOV01000008 (original name was: NZ_PYOV01000008.1)

Compact view

c00002_NZ_PYOV.. - Region 1 - RiPP-like

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Location: 52,948 - 63,811 nt. (total: 10,864 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000896.1	0.17	Other	cycloserine	Streptomyces lavendulae subsp. lavendulae
BGC0000627.1	0.07	RiPP	ustiloxin B	Aspergillus flavus NRRL3357
BGC0001733.1	0.06	RiPP	PcpA	Pleurocapsa sp. PCC 7327
BGC0001133.1	0.05	NRP	taxlllaid A	Xenorhabdus bovienii SS-2004
BGC0001441.1	0.05	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000343.1	0.04	NRP	enterobactin	Pseudomonas sp. J465
BGC0000448.1	0.03	NRP	tomaymycin	Streptomyces achromogenes
BGC0000907.1	0.03	Other	lincomycin	Streptomyces lincolnensis
BGC0001652.1	0.03	NRP	limazepine C, limazepine D, limazepine E, limazepine F, limazepine A	Streptomyces sp. ICBB 8177

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000896.1	0.47	Other	cycloserine	Streptomyces lavendulae subsp. lavendulae
BGC0000627.1	0.29	RiPP	ustiloxin B	Aspergillus flavus NRRL3357
BGC0001733.1	0.24	RiPP	PcpA	Pleurocapsa sp. PCC 7327
BGC0001133.1	0.22	NRP	taxlllaid A	Xenorhabdus bovienii SS-2004
BGC0001441.1	0.21	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000343.1	0.18	NRP	enterobactin	Pseudomonas sp. J465
BGC0000448.1	0.17	NRP	tomaymycin	Streptomyces achromogenes
BGC0000907.1	0.16	Other	lincomycin	Streptomyces lincolnensis
BGC0001652.1	0.15	NRP	limazepine C, limazepine D, limazepine E, limazepine F, limazepine A	Streptomyces sp. ICBB 8177

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00012_NZ_PYOV.. - Region 1 - arylpolyene,ectoine

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Location: 62,182 - 105,810 nt. (total: 43,629 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)
ectoine: ectoine_synt

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000855.1	0.85	Other	ectoine	Methylomicrobium kenyense
BGC0000856.1	0.84	Other	ectoine	Methylophaga thalassica
BGC0000859.1	0.84	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000853.1	0.80	Other	ectoine	Streptomyces anulatus
BGC0000858.1	0.80	Other	ectoine	Methylobacter marinus
BGC0000852.1	0.77	Other	ectoine	Sporosarcina pasteurii
BGC0000857.1	0.69	Other	ectoine	Methylophaga alcalica
BGC0000860.1	0.66	Other	ectoine	Methylarcula marina
BGC0000837.1	0.65	Other	APE Vf	Aliivibrio fischeri ES114
BGC0000854.1	0.63	Other	ectoine	Methylomicrobium alcaliphilum 20Z

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000837.1	0.79	Other	APE Vf	Aliivibrio fischeri ES114
BGC0000855.1	0.74	Other	ectoine	Methylomicrobium kenyense
BGC0000856.1	0.73	Other	ectoine	Methylophaga thalassica
BGC0000859.1	0.73	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000853.1	0.72	Other	ectoine	Streptomyces anulatus
BGC0000858.1	0.72	Other	ectoine	Methylobacter marinus
BGC0000852.1	0.71	Other	ectoine	Sporosarcina pasteurii
BGC0000857.1	0.69	Other	ectoine	Methylophaga alcalica
BGC0002008.1	0.69	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000860.1	0.68	Other	ectoine	Methylarcula marina

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00015_NZ_PYOV.. - Region 1 - siderophore

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Location: 1 - 10,716 nt. (total: 10,716 nt) Show pHMM detection rules used

Region on contig edge.

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000942.1	0.36	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001713.1	0.27	Other	ochrobactin	Ochrobactrum anthropi
BGC0001572.1	0.26	Other	desferrioxamine E	Pantoea agglomerans
BGC0001498.1	0.26	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0001531.1	0.25	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0001453.1	0.24	Other	desferrioxamine	Streptomyces argillaceus
BGC0000940.1	0.24	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0000939.1	0.24	Other	aerobactin	Grimontia hollisae
BGC0000946.1	0.23	Other	vibrioferrin	Vibrio parahaemolyticus
BGC0000941.1	0.23	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000942.1	0.69	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001713.1	0.60	Other	ochrobactin	Ochrobactrum anthropi
BGC0001572.1	0.60	Other	desferrioxamine E	Pantoea agglomerans
BGC0001498.1	0.59	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0001531.1	0.58	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0001453.1	0.58	Other	desferrioxamine	Streptomyces argillaceus
BGC0000940.1	0.57	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0000939.1	0.57	Other	aerobactin	Grimontia hollisae
BGC0000946.1	0.56	Other	vibrioferrin	Vibrio parahaemolyticus
BGC0000941.1	0.56	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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c00016_NZ_PYOV.. - Region 1 - terpene

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Location: 113,411 - 135,450 nt. (total: 22,040 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.47	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000656.1	0.35	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000633.1	0.33	Terpene	carotenoid	Streptomyces avermitilis
BGC0000648.1	0.32	Terpene	carotenoid	Myxococcus xanthus
BGC0001227.1	0.29	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000646.1	0.27	Terpene	β-carotein	uncultured bacterium
BGC0000640.1	0.27	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.1	0.26	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000638.1	0.23	Terpene	carotenoid	Pantoea ananatis
BGC0000639.1	0.23	Terpene	carotenoid	Enterobacteriaceae bacterium DC260

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.77	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000656.1	0.68	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000633.1	0.66	Terpene	carotenoid	Streptomyces avermitilis
BGC0000648.1	0.66	Terpene	carotenoid	Myxococcus xanthus
BGC0001227.1	0.63	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000646.1	0.60	Terpene	β-carotein	uncultured bacterium
BGC0000640.1	0.60	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.1	0.60	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000638.1	0.57	Terpene	carotenoid	Pantoea ananatis
BGC0000639.1	0.56	Terpene	carotenoid	Enterobacteriaceae bacterium DC260

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00021_NZ_PYOV.. - Region 1 - betalactone

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Location: 48,644 - 75,787 nt. (total: 27,144 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.19	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000554.1	0.17	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000571.1	0.17	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001391.1	0.16	RiPP	thusin	Bacillus thuringiensis serovar rongseni
BGC0000538.1	0.16	RiPP	nisin Z	Lactococcus lactis
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000506.1	0.16	RiPP	entianin	Bacillus subtilis subsp. spizizenii
BGC0001494.1	0.16	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000521.1	0.16	RiPP	lacticin 481	Lactococcus lactis subsp. lactis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.52	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000554.1	0.48	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000571.1	0.48	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001391.1	0.47	RiPP	thusin	Bacillus thuringiensis serovar rongseni
BGC0000538.1	0.47	RiPP	nisin Z	Lactococcus lactis
BGC0001120.1	0.47	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000506.1	0.47	RiPP	entianin	Bacillus subtilis subsp. spizizenii
BGC0001494.1	0.47	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000521.1	0.46	RiPP	lacticin 481	Lactococcus lactis subsp. lactis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names