GCF_020531725.1_ASM2053172v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00001_NZ_JAJA.. (original name was: NZ_JAJAVX010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	hserlactone	711,502	732,146

c00003_NZ_JAJA.. (original name was: NZ_JAJAVX010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	betalactone	373,523	399,284

c00008_NZ_JAJA.. (original name was: NZ_JAJAVX010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	thiopeptide	72,238	98,527	O-antigen	Saccharide	14%

c00019_NZ_JAJA.. (original name was: NZ_JAJAVX010000019.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	9,819	22,677

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	hserlactone	711,502	732,146
Region 3.1	betalactone	373,523	399,284
Region 8.1	thiopeptide	72,238	98,527	O-antigen	Saccharide	14%
Region 19.1	RiPP-like	9,819	22,677

No secondary metabolite regions were found in these records:: c00002_NZ_JAJA.. (original name was: NZ_JAJAVX010000002.1); c00004_NZ_JAJA.. (original name was: NZ_JAJAVX010000004.1); c00005_NZ_JAJA.. (original name was: NZ_JAJAVX010000005.1); c00006_NZ_JAJA.. (original name was: NZ_JAJAVX010000006.1); c00007_NZ_JAJA.. (original name was: NZ_JAJAVX010000007.1); c00009_NZ_JAJA.. (original name was: NZ_JAJAVX010000009.1); c00010_NZ_JAJA.. (original name was: NZ_JAJAVX010000010.1); c00011_NZ_JAJA.. (original name was: NZ_JAJAVX010000011.1); c00012_NZ_JAJA.. (original name was: NZ_JAJAVX010000012.1); c00013_NZ_JAJA.. (original name was: NZ_JAJAVX010000013.1); c00014_NZ_JAJA.. (original name was: NZ_JAJAVX010000014.1); c00015_NZ_JAJA.. (original name was: NZ_JAJAVX010000015.1); c00016_NZ_JAJA.. (original name was: NZ_JAJAVX010000016.1); c00017_NZ_JAJA.. (original name was: NZ_JAJAVX010000017.1); c00018_NZ_JAJA.. (original name was: NZ_JAJAVX010000018.1); c00020_NZ_JAJA.. (original name was: NZ_JAJAVX010000020.1); c00021_NZ_JAJA.. (original name was: NZ_JAJAVX010000021.1); c00022_NZ_JAJA.. (original name was: NZ_JAJAVX010000022.1); c00023_NZ_JAJA.. (original name was: NZ_JAJAVX010000023.1); c00024_NZ_JAJA.. (original name was: NZ_JAJAVX010000024.1); c00025_NZ_JAJA.. (original name was: NZ_JAJAVX010000025.1); c00026_NZ_JAJA.. (original name was: NZ_JAJAVX010000026.1); c00027_NZ_JAJA.. (original name was: NZ_JAJAVX010000027.1); c00028_NZ_JAJA.. (original name was: NZ_JAJAVX010000028.1); c00029_NZ_JAJA.. (original name was: NZ_JAJAVX010000029.1); c00030_NZ_JAJA.. (original name was: NZ_JAJAVX010000030.1)

Compact view

c00001_NZ_JAJA.. - Region 1 - hserlactone

Download region GenBank file

Download region SVG

Location: 711,502 - 732,146 nt. (total: 20,645 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	hserlactone	Similarity score	Type	Compound(s)	Organism
BGC0001047.1		0.08	NRP, Polyketide	syringolin A	Pseudomonas syringae
BGC0000329.1		0.07	NRP	corpeptin A, corpeptin B	Pseudomonas corrugata

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0001047.1		0.30	NRP, Polyketide	syringolin A	Pseudomonas syringae
BGC0000329.1		0.28	NRP	corpeptin A, corpeptin B	Pseudomonas corrugata

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00003_NZ_JAJA.. - Region 1 - betalactone

Download region GenBank file

Download region SVG

Location: 373,523 - 399,284 nt. (total: 25,762 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.24	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000904.1	0.21	Other	FR-900098	Streptomyces rubellomurinus
BGC0001441.1	0.15	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0001896.1	0.13	Other	carbazomycin B	Streptomyces luteoverticillatus
BGC0000597.1	0.13	RiPP	SWA-2138	Streptomyces sp. e14
BGC0000595.1	0.13	RiPP	SCO-2138	Streptomyces coelicolor A3(2)
BGC0000596.1	0.13	RiPP	SLI-2138	Streptomyces lividans TK24
BGC0000417.1	0.13	NRP	rhodochelin	Rhodococcus jostii RHA1
BGC0000892.1	0.13	Other	caryoynencin	Burkholderia gladioli BSR3
BGC0000844.1	0.13	Other	clavulanic acid	Streptomyces clavuligerus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.57	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000904.1	0.54	Other	FR-900098	Streptomyces rubellomurinus
BGC0001441.1	0.45	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0001896.1	0.42	Other	carbazomycin B	Streptomyces luteoverticillatus
BGC0000597.1	0.42	RiPP	SWA-2138	Streptomyces sp. e14
BGC0000595.1	0.42	RiPP	SCO-2138	Streptomyces coelicolor A3(2)
BGC0000596.1	0.42	RiPP	SLI-2138	Streptomyces lividans TK24
BGC0000417.1	0.42	NRP	rhodochelin	Rhodococcus jostii RHA1
BGC0000892.1	0.41	Other	caryoynencin	Burkholderia gladioli BSR3
BGC0000844.1	0.41	Other	clavulanic acid	Streptomyces clavuligerus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00008_NZ_JAJA.. - Region 1 - thiopeptide

Download region GenBank file

Download region SVG

Location: 72,238 - 98,527 nt. (total: 26,290 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000784.1	0.25	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000781.1	0.16	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0001534.1	0.15	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0000800.1	0.14	Saccharide	xanthan	Xanthomonas campestris
BGC0001285.1	0.07	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001302.1	0.06	Other	lomofungin	Streptomyces lomondensis
BGC0002012.1	0.05	Polyketide	julichrome Q3-3, julichrome Q3-5	Streptomyces afghaniensis 772
BGC0000343.1	0.05	NRP	enterobactin	Pseudomonas sp. J465
BGC0001283.1	0.05	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0001196.1	0.04	NRP	desotamide	Streptomyces scopuliridis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000784.1	0.59	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000781.1	0.47	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0001534.1	0.46	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0000800.1	0.43	Saccharide	xanthan	Xanthomonas campestris
BGC0001285.1	0.29	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001302.1	0.24	Other	lomofungin	Streptomyces lomondensis
BGC0002012.1	0.23	Polyketide	julichrome Q3-3, julichrome Q3-5	Streptomyces afghaniensis 772
BGC0000343.1	0.22	NRP	enterobactin	Pseudomonas sp. J465
BGC0001283.1	0.22	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0001196.1	0.20	NRP	desotamide	Streptomyces scopuliridis

Similar known gene clusters

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

Thiopeptides

Core peptide predictions

No core peptides found.

c00019_NZ_JAJA.. - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 9,819 - 22,677 nt. (total: 12,859 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

No matches found.

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names