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Overview
21.1

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_GL830961.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 21.1 | terpene | 1 | 17,276 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 21.1 | terpene | 1 | 17,276 |

No secondary metabolite regions were found in these records:
  NZ_GL830939.1
  NZ_GL830940.1
  NZ_GL830941.1
  NZ_GL830942.1
  NZ_GL830944.1
  NZ_GL830945.1
  NZ_GL830946.1
  NZ_GL830947.1
  NZ_GL830948.1
  NZ_GL830949.1
  NZ_GL830950.1
  NZ_GL830951.1
  NZ_GL830952.1
  NZ_GL830953.1
  NZ_GL830954.1
  NZ_GL830955.1
  NZ_GL830956.1
  NZ_GL830957.1
  NZ_GL830958.1
  NZ_GL830960.1
  NZ_GL830962.1
  NZ_GL830963.1
  NZ_GL830964.1
  NZ_GL830965.1
  NZ_GL830966.1
  NZ_GL830967.1
  NZ_GL830968.1
  NZ_GL830969.1
  NZ_GL830970.1
  NZ_GL830971.1
  NZ_GL830972.1
  NZ_GL830973.1
  NZ_GL830974.1
  NZ_GL830975.1
  NZ_GL830976.1
  NZ_GL830977.1
  NZ_GL830979.1
  NZ_GL830981.1
  NZ_GL830982.1
  NZ_GL830983.1
  NZ_GL830984.1
  NZ_GL830985.1
  NZ_GL830986.1
  NZ_GL830987.1
  NZ_GL830988.1
  NZ_GL830989.1
  NZ_GL830990.1
  NZ_GL830991.1
  NZ_GL830992.1
  NZ_GL830993.1
  NZ_GL830994.1
  NZ_GL830995.1
  NZ_GL830997.1
  NZ_GL830998.1
  NZ_GL830999.1
  NZ_GL831000.1
  NZ_GL831001.1
  NZ_GL831002.1
  NZ_GL831003.1
  NZ_GL831004.1
  NZ_GL831005.1
  NZ_GL831006.1
  NZ_GL831007.1
  NZ_GL831008.1
  NZ_GL831009.1
  NZ_GL831010.1
  NZ_GL831011.1
  NZ_GL831012.1
  NZ_GL831013.1
  NZ_GL831014.1
  NZ_GL831016.1
  NZ_GL831017.1
  NZ_GL831019.1
  NZ_GL831020.1
  NZ_GL831021.1
  NZ_GL831023.1
  NZ_GL831024.1
  NZ_GL831025.1
  NZ_GL831026.1
  NZ_GL831027.1
  NZ_GL831028.1
  NZ_GL831030.1
  NZ_GL831031.1
  NZ_GL831033.1
  NZ_GL831034.1
  NZ_GL831035.1
  NZ_GL831036.1
  NZ_GL831037.1
  NZ_GL831038.1
  NZ_GL831039.1
  NZ_GL831042.1
  NZ_GL831043.1
  NZ_GL831045.1
  NZ_GL831046.1
  NZ_GL831047.1
  NZ_GL831048.1
  NZ_GL831049.1
  NZ_GL831050.1
  NZ_GL831051.1
  NZ_GL831052.1
  NZ_GL831053.1
  NZ_GL831054.1
  NZ_GL831055.1
  NZ_GL831056.1
  NZ_GL831057.1
  NZ_GL831058.1
  NZ_GL831059.1
  NZ_GL831060.1
  NZ_GL831061.1
  NZ_GL831062.1
  NZ_GL831064.1
  NZ_GL831065.1
  NZ_GL831067.1
  NZ_GL831068.1
  NZ_GL831069.1
  NZ_GL831071.1
  NZ_GL831073.1
  NZ_GL831074.1
  NZ_GL831075.1
  NZ_GL831076.1
  NZ_GL831077.1
  NZ_GL831079.1

Compact view
NZ_GL830961.1 - Region 1 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 17,276 nt. (total: 17,276 nt) Show pHMM detection rules used
Region on contig edge.
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | terpene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000849.1 |  | 0.16 | Other (Butyrolactone) | SCB1, SCB2, SCB3 | Streptomyces coelicolor A3(2)
BGC0000294.1 |  | 0.15 | NRP | acinetobactin | Acinetobacter baumannii
BGC0001928.1 |  | 0.15 | Other | (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid | Streptomyces sp. MA37
BGC0001289.1 |  | 0.14 | RiPP | penisin | Paenibacillus ehimensis
BGC0000451.1 |  | 0.14 | NRP | turnerbactin | Teredinibacter turnerae T7901
BGC0001733.1 |  | 0.12 | RiPP | PcpA | Pleurocapsa sp. PCC 7327
BGC0001475.1 |  | 0.11 | Polyketide | aspterric acid | Aspergillus terreus NIH2624
BGC0000398.1 |  | 0.08 | NRP | orfamide B | Pseudomonas sp. CMR12a
BGC0000938.1 |  | 0.07 | Other (Aminocoumarin) | fosfomycin | Streptomyces fradiae
BGC0000399.1 |  | 0.07 | NRP | orfamide A, orfamide C | Pseudomonas protegens Pf-5

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000849.1 |  | 0.47 | Other (Butyrolactone) | SCB1, SCB2, SCB3 | Streptomyces coelicolor A3(2)
BGC0000294.1 |  | 0.46 | NRP | acinetobactin | Acinetobacter baumannii
BGC0001928.1 |  | 0.45 | Other | (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid | Streptomyces sp. MA37
BGC0001289.1 |  | 0.43 | RiPP | penisin | Paenibacillus ehimensis
BGC0000451.1 |  | 0.43 | NRP | turnerbactin | Teredinibacter turnerae T7901
BGC0001733.1 |  | 0.39 | RiPP | PcpA | Pleurocapsa sp. PCC 7327
BGC0001475.1 |  | 0.39 | Polyketide | aspterric acid | Aspergillus terreus NIH2624
BGC0000398.1 |  | 0.30 | NRP | orfamide B | Pseudomonas sp. CMR12a
BGC0000938.1 |  | 0.29 | Other (Aminocoumarin) | fosfomycin | Streptomyces fradiae
BGC0000399.1 |  | 0.28 | NRP | orfamide A, orfamide C | Pseudomonas protegens Pf-5

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names