GCF_029075745.1_ASM2907574v1_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00005_NZ_JARE.. (original name was: NZ_JAREJE010000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	siderophore	31,416	43,272

c00022_NZ_JARE.. (original name was: NZ_JAREJE010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	thiopeptide	273,229	299,474

c00030_NZ_JARE.. (original name was: NZ_JAREJE010000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	betalactone	100,634	126,129

Region	Type	From	To	Similarity
Region 5.1	siderophore	31,416	43,272
Region 22.1	thiopeptide	273,229	299,474
Region 30.1	betalactone	100,634	126,129

No secondary metabolite regions were found in these records:: c00001_NZ_JARE.. (original name was: NZ_JAREJE010000010.1); c00002_NZ_JARE.. (original name was: NZ_JAREJE010000011.1); c00003_NZ_JARE.. (original name was: NZ_JAREJE010000012.1); c00004_NZ_JARE.. (original name was: NZ_JAREJE010000013.1); c00006_NZ_JARE.. (original name was: NZ_JAREJE010000015.1); c00007_NZ_JARE.. (original name was: NZ_JAREJE010000016.1); c00008_NZ_JARE.. (original name was: NZ_JAREJE010000017.1); c00009_NZ_JARE.. (original name was: NZ_JAREJE010000018.1); c00010_NZ_JARE.. (original name was: NZ_JAREJE010000019.1); c00011_NZ_JARE.. (original name was: NZ_JAREJE010000001.1); c00012_NZ_JARE.. (original name was: NZ_JAREJE010000020.1); c00013_NZ_JARE.. (original name was: NZ_JAREJE010000021.1); c00014_NZ_JARE.. (original name was: NZ_JAREJE010000022.1); c00015_NZ_JARE.. (original name was: NZ_JAREJE010000023.1); c00016_NZ_JARE.. (original name was: NZ_JAREJE010000024.1); c00017_NZ_JARE.. (original name was: NZ_JAREJE010000025.1); c00018_NZ_JARE.. (original name was: NZ_JAREJE010000026.1); c00019_NZ_JARE.. (original name was: NZ_JAREJE010000027.1); c00020_NZ_JARE.. (original name was: NZ_JAREJE010000028.1); c00021_NZ_JARE.. (original name was: NZ_JAREJE010000029.1); c00023_NZ_JARE.. (original name was: NZ_JAREJE010000030.1); c00024_NZ_JARE.. (original name was: NZ_JAREJE010000031.1); c00025_NZ_JARE.. (original name was: NZ_JAREJE010000032.1); c00026_NZ_JARE.. (original name was: NZ_JAREJE010000003.1); c00027_NZ_JARE.. (original name was: NZ_JAREJE010000004.1); c00028_NZ_JARE.. (original name was: NZ_JAREJE010000005.1); c00029_NZ_JARE.. (original name was: NZ_JAREJE010000006.1); c00031_NZ_JARE.. (original name was: NZ_JAREJE010000008.1); c00032_NZ_JARE.. (original name was: NZ_JAREJE010000009.1)

Compact view

c00005_NZ_JARE.. - Region 1 - siderophore

Download region GenBank file

Download region SVG

Location: 31,416 - 43,272 nt. (total: 11,857 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001499.1	0.20	Other	aerobactin	Pantoea ananatis
BGC0001408.1	0.19	Other	xanthoferrin	Xanthomonas oryzae pv. oryzae KACC 10331
BGC0001587.1	0.16	Other	ethylenediaminesuccinic acid hydroxyarginine (EDHA)	Streptomyces avermitilis MA-4680 = NBRC 14893
BGC0000688.1	0.16	Terpene	copalyl diphosphate	Diaporthe amygdali
BGC0001948.1	0.15	Other	naseseazine C, C3-aryl pyrroloindolines	Streptomyces sp.
BGC0000294.1	0.15	NRP	acinetobactin	Acinetobacter baumannii
BGC0001150.1	0.15	Polyketide	pamamycin-607	Streptomyces alboniger
BGC0000774.1	0.15	Saccharide	lipopolysaccharide	Xanthomonas campestris pv. campestris
BGC0000943.1	0.15	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001783.1	0.13	Other	streptonigrin	Streptomyces flocculus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001499.1	0.52	Other	aerobactin	Pantoea ananatis
BGC0001408.1	0.51	Other	xanthoferrin	Xanthomonas oryzae pv. oryzae KACC 10331
BGC0001587.1	0.47	Other	ethylenediaminesuccinic acid hydroxyarginine (EDHA)	Streptomyces avermitilis MA-4680 = NBRC 14893
BGC0000688.1	0.46	Terpene	copalyl diphosphate	Diaporthe amygdali
BGC0001948.1	0.45	Other	naseseazine C, C3-aryl pyrroloindolines	Streptomyces sp.
BGC0000294.1	0.45	NRP	acinetobactin	Acinetobacter baumannii
BGC0001150.1	0.45	Polyketide	pamamycin-607	Streptomyces alboniger
BGC0000774.1	0.45	Saccharide	lipopolysaccharide	Xanthomonas campestris pv. campestris
BGC0000943.1	0.44	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001783.1	0.42	Other	streptonigrin	Streptomyces flocculus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00022_NZ_JARE.. - Region 1 - thiopeptide

Download region GenBank file

Download region SVG

Location: 273,229 - 299,474 nt. (total: 26,246 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001534.1	0.14	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0001285.1	0.07	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001312.1	0.07	NRP	viscosin	Pseudomonas fluorescens SBW25
BGC0001122.1	0.06	NRP, Polyketide	dihydroisoflavipucine, isoflavipucine	Aspergillus terreus NIH2624
BGC0001196.1	0.06	NRP	desotamide	Streptomyces scopuliridis
BGC0001365.1	0.06	NRP	clapurines	Claviceps purpurea 20.1
BGC0001926.1	0.05	Polyketide	chrodrimanin B	Talaromyces verruculosus
BGC0000721.1	0.05	Saccharide	tobramycin	Streptoalloteichus tenebrarius
BGC0001580.1	0.05	Polyketide	ebelactone	Kitasatospora aburaviensis
BGC0001084.1	0.04	NRP, Terpene, Alkaloid	notoamide A	Aspergillus sp. MF297-2

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001534.1	0.44	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0001285.1	0.29	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001312.1	0.28	NRP	viscosin	Pseudomonas fluorescens SBW25
BGC0001122.1	0.27	NRP, Polyketide	dihydroisoflavipucine, isoflavipucine	Aspergillus terreus NIH2624
BGC0001196.1	0.26	NRP	desotamide	Streptomyces scopuliridis
BGC0001365.1	0.25	NRP	clapurines	Claviceps purpurea 20.1
BGC0001926.1	0.24	Polyketide	chrodrimanin B	Talaromyces verruculosus
BGC0000721.1	0.22	Saccharide	tobramycin	Streptoalloteichus tenebrarius
BGC0001580.1	0.21	Polyketide	ebelactone	Kitasatospora aburaviensis
BGC0001084.1	0.20	NRP, Terpene, Alkaloid	notoamide A	Aspergillus sp. MF297-2

Similar known gene clusters

No matches found.

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

Thiopeptides

Core peptide predictions

No core peptides found.

c00030_NZ_JARE.. - Region 1 - betalactone

Download region GenBank file

Download region SVG

Location: 100,634 - 126,129 nt. (total: 25,496 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.24	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0001441.1	0.18	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000829.1	0.16	Alkaloid	violacein	Chromobacterium violaceum
BGC0000904.1	0.15	Other	FR-900098	Streptomyces rubellomurinus
BGC0001131.1	0.14	NRP	ambactin	Xenorhabdus miraniensis
BGC0000495.1	0.14	RiPP	actagardine	Actinoplanes garbadinensis
BGC0001896.1	0.13	Other	carbazomycin B	Streptomyces luteoverticillatus
BGC0000597.1	0.13	RiPP	SWA-2138	Streptomyces sp. e14
BGC0001137.1	0.13	Alkaloid	marinacarboline A, marinacarboline B, marinacarboline C, marinacarboline D	Marinactinospora thermotolerans
BGC0001411.1	0.13	Saccharide	polysaccharide B	Bacteroides fragilis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.58	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0001441.1	0.50	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000829.1	0.47	Alkaloid	violacein	Chromobacterium violaceum
BGC0000904.1	0.45	Other	FR-900098	Streptomyces rubellomurinus
BGC0001131.1	0.43	NRP	ambactin	Xenorhabdus miraniensis
BGC0000495.1	0.43	RiPP	actagardine	Actinoplanes garbadinensis
BGC0001896.1	0.42	Other	carbazomycin B	Streptomyces luteoverticillatus
BGC0000597.1	0.42	RiPP	SWA-2138	Streptomyces sp. e14
BGC0001137.1	0.41	Alkaloid	marinacarboline A, marinacarboline B, marinacarboline C, marinacarboline D	Marinactinospora thermotolerans
BGC0001411.1	0.41	Saccharide	polysaccharide B	Bacteroides fragilis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names