GCF_011617105.1_ASM1161710v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP050150.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	siderophore	648,007	659,842	desferrioxamine E	Other	75%
Region 1.2	thiopeptide	1,642,170	1,668,688	O-antigen	Saccharide	14%
Region 1.3	hserlactone	2,511,420	2,532,067
Region 1.4	betalactone	3,748,962	3,774,466

No secondary metabolite regions were found in these records:: NZ_CP050151.1

Compact view

NZ_CP050150.1 - Region 1 - siderophore

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Location: 648,007 - 659,842 nt. (total: 11,836 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001572.1	0.39	Other	desferrioxamine E	Pantoea agglomerans
BGC0001478.1	0.37	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.32	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001453.1	0.30	Other	desferrioxamine	Streptomyces argillaceus
BGC0000940.1	0.30	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0001713.1	0.21	Other	ochrobactin	Ochrobactrum anthropi
BGC0001499.1	0.20	Other	aerobactin	Pantoea ananatis
BGC0000295.1	0.20	NRP	acinetoferrin	Acinetobacter haemolyticus
BGC0001531.1	0.18	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0000939.1	0.18	Other	aerobactin	Grimontia hollisae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001572.1	0.71	Other	desferrioxamine E	Pantoea agglomerans
BGC0001478.1	0.69	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.66	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001453.1	0.64	Other	desferrioxamine	Streptomyces argillaceus
BGC0000940.1	0.64	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0001713.1	0.54	Other	ochrobactin	Ochrobactrum anthropi
BGC0001499.1	0.53	Other	aerobactin	Pantoea ananatis
BGC0000295.1	0.52	NRP	acinetoferrin	Acinetobacter haemolyticus
BGC0001531.1	0.49	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0000939.1	0.49	Other	aerobactin	Grimontia hollisae

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP050150.1 - Region 2 - thiopeptide

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Location: 1,642,170 - 1,668,688 nt. (total: 26,519 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000784.1	0.26	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000781.1	0.16	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0001285.1	0.10	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001441.1	0.07	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000981.1	0.07	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E6
BGC0001302.1	0.06	Other	lomofungin	Streptomyces lomondensis
BGC0002012.1	0.05	Polyketide	julichrome Q3-3, julichrome Q3-5	Streptomyces afghaniensis 772
BGC0000343.1	0.05	NRP	enterobactin	Pseudomonas sp. J465
BGC0001283.1	0.05	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0000957.1	0.04	NRP, Polyketide	mycotrienin I	Streptomyces sp. XZQH13

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000784.1	0.59	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000781.1	0.47	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0001285.1	0.35	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001441.1	0.29	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000981.1	0.28	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E6
BGC0001302.1	0.24	Other	lomofungin	Streptomyces lomondensis
BGC0002012.1	0.23	Polyketide	julichrome Q3-3, julichrome Q3-5	Streptomyces afghaniensis 772
BGC0000343.1	0.22	NRP	enterobactin	Pseudomonas sp. J465
BGC0001283.1	0.22	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0000957.1	0.19	NRP, Polyketide	mycotrienin I	Streptomyces sp. XZQH13

Similar known gene clusters

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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Thiopeptides

Core peptide predictions

No core peptides found.

NZ_CP050150.1 - Region 3 - hserlactone

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Location: 2,511,420 - 2,532,067 nt. (total: 20,648 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001521.1	0.13	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0001011.1	0.04	NRP, Polyketide	meridamycin	Streptomyces sp. NRRL 30748
BGC0001236.1	0.03	Polyketide	thiotetroamide	Streptomyces afghaniensis
BGC0001791.1	0.03	NRP	sunshinamide	Gynuella sunshinyii YC6258
BGC0001555.1	0.03	RiPP	colicin V	Escherichia coli chi7122

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001521.1	0.41	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0001011.1	0.18	NRP, Polyketide	meridamycin	Streptomyces sp. NRRL 30748
BGC0001236.1	0.17	Polyketide	thiotetroamide	Streptomyces afghaniensis
BGC0001791.1	0.15	NRP	sunshinamide	Gynuella sunshinyii YC6258
BGC0001555.1	0.15	RiPP	colicin V	Escherichia coli chi7122

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP050150.1 - Region 4 - betalactone

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Location: 3,748,962 - 3,774,466 nt. (total: 25,505 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.20	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000904.1	0.16	Other	FR-900098	Streptomyces rubellomurinus
BGC0001441.1	0.14	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0001135.1	0.14	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001641.1	0.14	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001128.1	0.14	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001240.1	0.14	NRP	serinocyclin A, serinocyclin B	Metarhizium robertsii
BGC0001844.1	0.14	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001479.1	0.14	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0000805.1	0.13	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.52	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000904.1	0.46	Other	FR-900098	Streptomyces rubellomurinus
BGC0001441.1	0.44	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0001135.1	0.44	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001641.1	0.43	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001128.1	0.43	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001240.1	0.43	NRP	serinocyclin A, serinocyclin B	Metarhizium robertsii
BGC0001844.1	0.43	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001479.1	0.43	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0000805.1	0.42	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names