GCF_006546835.1_ASM654683v1_genomic - 1 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_VICB01000025 (original name was: NZ_VICB01000025.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	thiopeptide	3,024	33,190

Region	Type	From	To	Most similar known cluster	Similarity
Region 25.1	thiopeptide	3,024	33,190

No secondary metabolite regions were found in these records:: NZ_VICB01000001 (original name was: NZ_VICB01000001.1); NZ_VICB01000002 (original name was: NZ_VICB01000002.1); NZ_VICB01000003 (original name was: NZ_VICB01000003.1); NZ_VICB01000004 (original name was: NZ_VICB01000004.1); NZ_VICB01000005 (original name was: NZ_VICB01000005.1); NZ_VICB01000006 (original name was: NZ_VICB01000006.1); NZ_VICB01000007 (original name was: NZ_VICB01000007.1); NZ_VICB01000008 (original name was: NZ_VICB01000008.1); NZ_VICB01000009 (original name was: NZ_VICB01000009.1); NZ_VICB01000010 (original name was: NZ_VICB01000010.1); NZ_VICB01000011 (original name was: NZ_VICB01000011.1); NZ_VICB01000012 (original name was: NZ_VICB01000012.1); NZ_VICB01000013 (original name was: NZ_VICB01000013.1); NZ_VICB01000014 (original name was: NZ_VICB01000014.1); NZ_VICB01000015 (original name was: NZ_VICB01000015.1); NZ_VICB01000016 (original name was: NZ_VICB01000016.1); NZ_VICB01000017 (original name was: NZ_VICB01000017.1); NZ_VICB01000018 (original name was: NZ_VICB01000018.1); NZ_VICB01000019 (original name was: NZ_VICB01000019.1); NZ_VICB01000020 (original name was: NZ_VICB01000020.1); NZ_VICB01000021 (original name was: NZ_VICB01000021.1); NZ_VICB01000022 (original name was: NZ_VICB01000022.1); NZ_VICB01000023 (original name was: NZ_VICB01000023.1); NZ_VICB01000024 (original name was: NZ_VICB01000024.1); NZ_VICB01000026 (original name was: NZ_VICB01000026.1); NZ_VICB01000027 (original name was: NZ_VICB01000027.1); NZ_VICB01000028 (original name was: NZ_VICB01000028.1); NZ_VICB01000029 (original name was: NZ_VICB01000029.1); NZ_VICB01000030 (original name was: NZ_VICB01000030.1); NZ_VICB01000031 (original name was: NZ_VICB01000031.1); NZ_VICB01000032 (original name was: NZ_VICB01000032.1); NZ_VICB01000035 (original name was: NZ_VICB01000035.1); NZ_VICB01000038 (original name was: NZ_VICB01000038.1); NZ_VICB01000039 (original name was: NZ_VICB01000039.1); NZ_VICB01000041 (original name was: NZ_VICB01000041.1)

Compact view

c00025_NZ_VICB.. - Region 1 - thiopeptide

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Location: 3,024 - 33,190 nt. (total: 30,167 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

TTA codons

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Gene details

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MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.15	Polyketide	chartreusin	Streptomyces chartreusis
BGC0001374.1	0.14	Other	thienodolin	Streptomyces albogriseolus
BGC0001472.1	0.14	RiPP	berninamycin A	Streptomyces bernensis
BGC0000903.1	0.14	Other	fluorometabolite	Streptomyces cattleya
BGC0000481.1	0.13	RiPP	trichamide	Trichodesmium erythraeum IMS101
BGC0001453.1	0.13	Other	desferrioxamine	Streptomyces argillaceus
BGC0000605.1	0.13	RiPP	GE37468	Streptomyces sp. ATCC 55365
BGC0000615.1	0.13	RiPP	TP-1161	Nocardiopsis sp. TFS65-07
BGC0000565.1	0.12	RiPP	goadsporin	Streptomyces sp. TP-A0584
BGC0001753.1	0.11	RiPP	radamycin, globimycin	Streptomyces globisporus subsp. globisporus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.45	Polyketide	chartreusin	Streptomyces chartreusis
BGC0001374.1	0.44	Other	thienodolin	Streptomyces albogriseolus
BGC0001472.1	0.44	RiPP	berninamycin A	Streptomyces bernensis
BGC0000903.1	0.43	Other	fluorometabolite	Streptomyces cattleya
BGC0000481.1	0.42	RiPP	trichamide	Trichodesmium erythraeum IMS101
BGC0001453.1	0.41	Other	desferrioxamine	Streptomyces argillaceus
BGC0000605.1	0.41	RiPP	GE37468	Streptomyces sp. ATCC 55365
BGC0000615.1	0.41	RiPP	TP-1161	Nocardiopsis sp. TFS65-07
BGC0000565.1	0.39	RiPP	goadsporin	Streptomyces sp. TP-A0584
BGC0001753.1	0.38	RiPP	radamycin, globimycin	Streptomyces globisporus subsp. globisporus

Similar known gene clusters

No matches found.

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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Thiopeptides

Core peptide predictions

No core peptides found.