GCF_002813755.1_ASM281375v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP018061.1

Region	Type	From	To
Region 1.1	cyclic-lactone-autoinducer	214,997	234,529
Region 1.2	T3PKS	939,578	980,735
Region 1.3	cyclic-lactone-autoinducer	1,443,532	1,464,265
Region 1.4	terpene	2,919,069	2,939,965

Region	Type	From	To	Similarity
Region 1.1	cyclic-lactone-autoinducer	214,997	234,529
Region 1.2	T3PKS	939,578	980,735
Region 1.3	cyclic-lactone-autoinducer	1,443,532	1,464,265
Region 1.4	terpene	2,919,069	2,939,965

No secondary metabolite regions were found in these records:: NZ_CP018062.1

Compact view

NZ_CP018061.1 - Region 1 - cyclic-lactone-autoinducer

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Location: 214,997 - 234,529 nt. (total: 19,533 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.18	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000494.1	0.16	RiPP	uberolysin	Streptococcus uberis
BGC0000804.1	0.14	Saccharide	acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03	Streptomyces coelicoflavus ZG0656
BGC0000540.1	0.12	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0000624.1	0.09	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001510.1	0.07	Other	anisomycin	Streptomyces hygrospinosus
BGC0001614.1	0.05	NRP	hassallidin E	Planktothrix serta PCC 8927
BGC0001011.1	0.03	NRP, Polyketide	meridamycin	Streptomyces sp. NRRL 30748

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.50	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000494.1	0.46	RiPP	uberolysin	Streptococcus uberis
BGC0000804.1	0.44	Saccharide	acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03	Streptomyces coelicoflavus ZG0656
BGC0000540.1	0.40	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0000624.1	0.33	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001510.1	0.27	Other	anisomycin	Streptomyces hygrospinosus
BGC0001614.1	0.23	NRP	hassallidin E	Planktothrix serta PCC 8927
BGC0001011.1	0.16	NRP, Polyketide	meridamycin	Streptomyces sp. NRRL 30748

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP018061.1 - Region 2 - T3PKS

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Location: 939,578 - 980,735 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.23	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000867.1	0.18	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.18	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000255.1	0.17	Polyketide	pederin	Uncultured bacterium
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001571.1	0.15	Terpene	demethoxyviridin	Nodulisporium sp.
BGC0001080.1	0.14	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0000934.1	0.14	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0001618.1	0.14	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0000498.1	0.13	RiPP	bovicin HJ50	Streptococcus equinus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.56	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000867.1	0.49	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.49	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000255.1	0.48	Polyketide	pederin	Uncultured bacterium
BGC0001120.1	0.47	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001571.1	0.45	Terpene	demethoxyviridin	Nodulisporium sp.
BGC0001080.1	0.44	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0000934.1	0.44	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0001618.1	0.43	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0000498.1	0.42	RiPP	bovicin HJ50	Streptococcus equinus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP018061.1 - Region 3 - cyclic-lactone-autoinducer

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Location: 1,443,532 - 1,464,265 nt. (total: 20,734 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.25	RiPP	circularin A	Clostridium beijerinckii
BGC0001291.1	0.23	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000487.1	0.17	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000560.1	0.16	RiPP	subtilomycin	Bacillus subtilis
BGC0000517.1	0.16	RiPP	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0000523.1	0.16	RiPP	lactocin S	Lactobacillus sakei
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001861.1	0.16	RiPP	bacillicin BAG2O	Bacillus cereus BAG2O-1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.58	RiPP	circularin A	Clostridium beijerinckii
BGC0001291.1	0.57	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000487.1	0.48	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000560.1	0.47	RiPP	subtilomycin	Bacillus subtilis
BGC0000517.1	0.47	RiPP	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0000523.1	0.47	RiPP	lactocin S	Lactobacillus sakei
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001861.1	0.46	RiPP	bacillicin BAG2O	Bacillus cereus BAG2O-1

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP018061.1 - Region 4 - terpene

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Location: 2,919,069 - 2,939,965 nt. (total: 20,897 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.35	Terpene	carotenoid	Myxococcus xanthus
BGC0000647.1	0.33	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000758.1	0.27	Saccharide	capsular polysaccharide	Staphylococcus aureus
BGC0000650.1	0.27	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000640.1	0.20	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000646.1	0.19	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.19	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000523.1	0.19	RiPP	lactocin S	Lactobacillus sakei
BGC0000630.1	0.18	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000641.1	0.18	Terpene	carotenoid	Enterobacteriaceae bacterium DC416

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.68	Terpene	carotenoid	Myxococcus xanthus
BGC0000647.1	0.67	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000758.1	0.60	Saccharide	capsular polysaccharide	Staphylococcus aureus
BGC0000650.1	0.60	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000640.1	0.53	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000646.1	0.51	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.51	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000523.1	0.51	RiPP	lactocin S	Lactobacillus sakei
BGC0000630.1	0.50	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000641.1	0.50	Terpene	carotenoid	Enterobacteriaceae bacterium DC416

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names