GCF_014054985.1_ASM1405498v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP059569.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	arylpolyene,resorcinol	171,364	258,570	APE Ec	Other	31%
Region 1.2	terpene	382,167	401,837
Region 1.3	terpene	1,442,724	1,463,575
Region 1.4	RiPP-like	2,388,116	2,398,991

No secondary metabolite regions were found in these records:: NZ_CP059568.1

Compact view

NZ_CP059569.1 - Region 1 - arylpolyene,resorcinol

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Location: 171,364 - 258,570 nt. (total: 87,207 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)
resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001897.1	0.58	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000261.1	0.48	Polyketide	R1128	Streptomyces sp. R1128
BGC0000231.1	0.48	Polyketide	griseusin	Streptomyces griseus
BGC0002008.1	0.47	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836.1	0.46	Other	APE Ec	Escherichia coli CFT073
BGC0000839.1	0.46	Other	flexirubin	Chitinophaga pinensis DSM 2588
BGC0002000.1	0.46	Polyketide	setomimycin	Streptomyces aurantiacus JA 4570
BGC0001895.1	0.45	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0001591.1	0.45	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.45	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001903.1	0.60	Other	neocarazostatin A	Streptomyces sp. MA37
BGC0001904.1	0.59	Polyketide	fluostatin	Micromonospora rosaria
BGC0000873.1	0.58	Other	A-201A	Saccharothrix mutabilis subsp. capreolus
BGC0000204.1	0.58	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0001177.1	0.58	Polyketide	mensacaricin	Streptomyces bottropensis
BGC0000231.1	0.57	Polyketide	griseusin	Streptomyces griseus
BGC0001895.1	0.57	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0001831.1	0.57	Polyketide	alkylpyrone-407, alkylpyrone-393	Myxococcus xanthus DK 1622
BGC0000236.1	0.57	Polyketide	kinamycin	Streptomyces murayamaensis
BGC0000286.1	0.56	Polyketide	viguiepinol	Streptomyces sp. KO-3988

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP059569.1 - Region 2 - terpene

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Location: 382,167 - 401,837 nt. (total: 19,671 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000633.1	0.20	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.20	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001227.1	0.18	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.1	0.17	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000649.1	0.16	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000663.1	0.12	Terpene	hopene	Streptomyces coelicolor A3(2)
BGC0001465.1	0.08	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0000350.1	0.06	NRP	ET-743	uncultured organism
BGC0001312.1	0.06	NRP	viscosin	Pseudomonas fluorescens SBW25

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000633.1	0.53	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.53	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001227.1	0.50	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.1	0.48	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001120.1	0.47	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000649.1	0.46	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000663.1	0.39	Terpene	hopene	Streptomyces coelicolor A3(2)
BGC0001465.1	0.32	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0000350.1	0.25	NRP	ET-743	uncultured organism
BGC0001312.1	0.25	NRP	viscosin	Pseudomonas fluorescens SBW25

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP059569.1 - Region 3 - terpene

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Location: 1,442,724 - 1,463,575 nt. (total: 20,852 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.33	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.29	Terpene	carotenoid	Myxococcus xanthus
BGC0000630.1	0.21	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000640.1	0.20	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000656.1	0.19	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000634.1	0.18	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.18	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000664.1	0.18	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000646.1	0.17	Terpene	β-carotein	uncultured bacterium
BGC0000633.1	0.17	Terpene	carotenoid	Streptomyces avermitilis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.66	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.63	Terpene	carotenoid	Myxococcus xanthus
BGC0000630.1	0.53	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000640.1	0.52	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000656.1	0.51	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000634.1	0.49	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.49	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000664.1	0.49	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000646.1	0.49	Terpene	β-carotein	uncultured bacterium
BGC0000633.1	0.48	Terpene	carotenoid	Streptomyces avermitilis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP059569.1 - Region 4 - RiPP-like

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Location: 2,388,116 - 2,398,991 nt. (total: 10,876 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000879.1	0.08	Other	toyocamycin, sangivamycin	Streptomyces rimosus
BGC0001808.1	0.07	Other	toyocamycin	Streptomyces diastatochromogenes
BGC0000881.1	0.07	Other	toyocamycin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0001937.1	0.07	Other	tubercidin	Streptomyces tubercidicus
BGC0001677.1	0.05	Polyketide	mycophenolic acid	Penicillium roqueforti
BGC0001650.1	0.04	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes
BGC0001360.1	0.04	Polyketide	mycophenolic acid	Penicillium roqueforti FM164
BGC0000104.1	0.04	Polyketide, Terpene	mycophenolic acid	Penicillium brevicompactum
BGC0000273.1	0.04	Polyketide, Saccharide	steffimycin D	Streptomyces steffisburgensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000879.1	0.30	Other	toyocamycin, sangivamycin	Streptomyces rimosus
BGC0001808.1	0.27	Other	toyocamycin	Streptomyces diastatochromogenes
BGC0000881.1	0.27	Other	toyocamycin	Streptomyces ahygroscopicus subsp. wuzhouensis
BGC0001937.1	0.27	Other	tubercidin	Streptomyces tubercidicus
BGC0001677.1	0.22	Polyketide	mycophenolic acid	Penicillium roqueforti
BGC0001650.1	0.21	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes
BGC0001360.1	0.20	Polyketide	mycophenolic acid	Penicillium roqueforti FM164
BGC0000104.1	0.17	Polyketide, Terpene	mycophenolic acid	Penicillium brevicompactum
BGC0000273.1	0.17	Polyketide, Saccharide	steffimycin D	Streptomyces steffisburgensis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names