Select genomic region:
Overview
1.1
1.2
1.3
1.4
1.5
1.6
1.7

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP094241.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1 | RiPP-like | 89,639 | 100,481 |
Region 2 | arylpolyene | 914,289 | 954,302 | APE Vf | Other | 30%
Region 3 | terpene | 1,291,563 | 1,310,077 |
Region 4 | terpene | 1,433,226 | 1,454,041 |
Region 5 | arylpolyene | 1,805,549 | 1,845,746 |
Region 6 | resorcinol,arylpolyene | 1,912,448 | 1,964,545 |
Region 7 | hserlactone | 2,127,062 | 2,147,811 |

NZ_CP094241.1 - Region 1 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 89,639 - 100,481 nt. (total: 10,843 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | RiPP-like | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000607.1 |  | 0.06 | RiPP | micrococcin P1 | Macrococcus caseolyticus
BGC0001804.1 |  | 0.03 | Polyketide | tiancimycin | Streptomyces sp. CB03234
BGC0001378.1 |  | 0.03 | Polyketide | tiancimycin | Streptomyces sp. CB03234
BGC0000236.1 |  | 0.03 | Polyketide | kinamycin | Streptomyces murayamaensis

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000607.1 |  | 0.24 | RiPP | micrococcin P1 | Macrococcus caseolyticus
BGC0001804.1 |  | 0.17 | Polyketide | tiancimycin | Streptomyces sp. CB03234
BGC0001378.1 |  | 0.17 | Polyketide | tiancimycin | Streptomyces sp. CB03234
BGC0000236.1 |  | 0.15 | Polyketide | kinamycin | Streptomyces murayamaensis

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP094241.1 - Region 2 - arylpolyene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 914,289 - 954,302 nt. (total: 40,014 nt) Show pHMM detection rules used
arylpolyene: (APE_KS1 or APE_KS2)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | arylpolyene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000231.1 |  | 0.21 | Polyketide | griseusin | Streptomyces griseus
BGC0000892.1 |  | 0.21 | Other | caryoynencin | Burkholderia gladioli BSR3
BGC0000234.1 |  | 0.20 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0000261.1 |  | 0.19 | Polyketide | R1128 | Streptomyces sp. R1128
BGC0000221.1 |  | 0.19 | Polyketide | erdacin | uncultured soil bacterium V167
BGC0000840.1 |  | 0.18 | Other | xanthomonadin I | Xanthomonas oryzae pv. oryzae
BGC0000204.1 |  | 0.18 | Polyketide | benastatin A, benastatin B, BE-43767, TAN1532B | Streptomyces sp. A2991200
BGC0002000.1 |  | 0.18 | Polyketide | setomimycin | Streptomyces aurantiacus JA 4570
BGC0000220.1 |  | 0.18 | Polyketide | enterocin | Streptomyces maritimus
BGC0000770.1 |  | 0.18 | Saccharide | lipo-oligosaccharide | Campylobacter jejuni

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000231.1 |  | 0.53 | Polyketide | griseusin | Streptomyces griseus
BGC0000892.1 |  | 0.53 | Other | caryoynencin | Burkholderia gladioli BSR3
BGC0000234.1 |  | 0.53 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0000261.1 |  | 0.51 | Polyketide | R1128 | Streptomyces sp. R1128
BGC0000221.1 |  | 0.51 | Polyketide | erdacin | uncultured soil bacterium V167
BGC0000840.1 |  | 0.50 | Other | xanthomonadin I | Xanthomonas oryzae pv. oryzae
BGC0000204.1 |  | 0.50 | Polyketide | benastatin A, benastatin B, BE-43767, TAN1532B | Streptomyces sp. A2991200
BGC0002000.1 |  | 0.49 | Polyketide | setomimycin | Streptomyces aurantiacus JA 4570
BGC0000220.1 |  | 0.49 | Polyketide | enterocin | Streptomyces maritimus
BGC0000770.1 |  | 0.49 | Saccharide | lipo-oligosaccharide | Campylobacter jejuni

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP094241.1 - Region 3 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,291,563 - 1,310,077 nt. (total: 18,515 nt) Show pHMM detection rules used
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | terpene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000647.1 |  | 0.34 | Terpene | carotenoid | Rhodobacter sphaeroides
BGC0000648.1 |  | 0.34 | Terpene | carotenoid | Myxococcus xanthus
BGC0000630.1 |  | 0.21 | Terpene | (2R,3S,3'S)-2-hydroxyastaxanthin | Paracoccus haeundaensis
BGC0000646.1 |  | 0.21 | Terpene | β-carotein | uncultured bacterium
BGC0000664.1 |  | 0.20 | Terpene | isorenieratene | Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1 |  | 0.20 | Terpene | carotenoid | Streptomyces avermitilis
BGC0000635.1 |  | 0.19 | Terpene | carotenoid | Paracoccus sp. N81106
BGC0000640.1 |  | 0.19 | Terpene | carotenoid | Enterobacteriaceae bacterium DC404
BGC0000656.1 |  | 0.19 | Terpene | zeaxanthin | Xanthobacter autotrophicus Py2
BGC0000638.1 |  | 0.18 | Terpene | carotenoid | Pantoea ananatis

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000647.1 |  | 0.67 | Terpene | carotenoid | Rhodobacter sphaeroides
BGC0000648.1 |  | 0.67 | Terpene | carotenoid | Myxococcus xanthus
BGC0000630.1 |  | 0.54 | Terpene | (2R,3S,3'S)-2-hydroxyastaxanthin | Paracoccus haeundaensis
BGC0000646.1 |  | 0.53 | Terpene | β-carotein | uncultured bacterium
BGC0000664.1 |  | 0.53 | Terpene | isorenieratene | Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1 |  | 0.52 | Terpene | carotenoid | Streptomyces avermitilis
BGC0000635.1 |  | 0.51 | Terpene | carotenoid | Paracoccus sp. N81106
BGC0000640.1 |  | 0.51 | Terpene | carotenoid | Enterobacteriaceae bacterium DC404
BGC0000656.1 |  | 0.51 | Terpene | zeaxanthin | Xanthobacter autotrophicus Py2
BGC0000638.1 |  | 0.50 | Terpene | carotenoid | Pantoea ananatis

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP094241.1 - Region 4 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,433,226 - 1,454,041 nt. (total: 20,816 nt) Show pHMM detection rules used
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | terpene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000648.1 |  | 0.27 | Terpene | carotenoid | Myxococcus xanthus
BGC0000906.1 |  | 0.18 | Other | heme D1 | Heliophilum fasciatum
BGC0000905.1 |  | 0.18 | Other | heme D1 | Heliobacillus mobilis
BGC0000633.1 |  | 0.17 | Terpene | carotenoid | Streptomyces avermitilis
BGC0000664.1 |  | 0.17 | Terpene | isorenieratene | Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.1 |  | 0.17 | Terpene | isorenieratene | Streptomyces argillaceus
BGC0001685.1 |  | 0.17 | Other | N-acyloxyacyl lysine | Raoultella ornithinolytica 10-5246
BGC0001227.1 |  | 0.16 | Terpene | isorenieratene | Streptomyces collinus Tu 365
BGC0000896.1 |  | 0.15 | Other | cycloserine | Streptomyces lavendulae subsp. lavendulae
BGC0001314.1 |  | 0.13 | Terpene | tirucalla | Arabidopsis thaliana

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000648.1 |  | 0.60 | Terpene | carotenoid | Myxococcus xanthus
BGC0000906.1 |  | 0.50 | Other | heme D1 | Heliophilum fasciatum
BGC0000905.1 |  | 0.50 | Other | heme D1 | Heliobacillus mobilis
BGC0000633.1 |  | 0.49 | Terpene | carotenoid | Streptomyces avermitilis
BGC0000664.1 |  | 0.48 | Terpene | isorenieratene | Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.1 |  | 0.48 | Terpene | isorenieratene | Streptomyces argillaceus
BGC0001685.1 |  | 0.48 | Other | N-acyloxyacyl lysine | Raoultella ornithinolytica 10-5246
BGC0001227.1 |  | 0.46 | Terpene | isorenieratene | Streptomyces collinus Tu 365
BGC0000896.1 |  | 0.45 | Other | cycloserine | Streptomyces lavendulae subsp. lavendulae
BGC0001314.1 |  | 0.42 | Terpene | tirucalla | Arabidopsis thaliana

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP094241.1 - Region 5 - arylpolyene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,805,549 - 1,845,746 nt. (total: 40,198 nt) Show pHMM detection rules used
arylpolyene: (APE_KS1 or APE_KS2)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | arylpolyene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000840.1 |  | 0.14 | Other | xanthomonadin I | Xanthomonas oryzae pv. oryzae
BGC0001917.1 |  | 0.14 | Polyketide | 5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals | Streptomyces nigrescens
BGC0000313.1 |  | 0.12 | NRP | beauvericin | Beauveria bassiana
BGC0000107.1 |  | 0.11 | Polyketide | naphthopyrone | Aspergillus nidulans FGSC A4
BGC0001906.1 |  | 0.11 | Polyketide | naphthalene | Daldinia eschscholzii IFB-TL01
BGC0001257.1 |  | 0.11 | Polyketide | 1,3,6,8-tetrahydroxynaphthalene | Nodulisporium sp. ATCC74245
BGC0001258.1 |  | 0.11 | Polyketide | 1,3,6,8-tetrahydroxynaphthalene | Glarea lozoyensis
BGC0001366.1 |  | 0.10 | Polyketide | BE-24566B, zunyimycin A | Streptomyces sp. FJS31-2
BGC0000383.1 |  | 0.09 | NRP, Polyketide | luminmycin A | Photorhabdus laumondii subsp. laumondii TTO1
BGC0001133.1 |  | 0.09 | NRP | taxlllaid A | Xenorhabdus bovienii SS-2004

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000840.1 |  | 0.44 | Other | xanthomonadin I | Xanthomonas oryzae pv. oryzae
BGC0001917.1 |  | 0.44 | Polyketide | 5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals | Streptomyces nigrescens
BGC0000313.1 |  | 0.39 | NRP | beauvericin | Beauveria bassiana
BGC0000107.1 |  | 0.38 | Polyketide | naphthopyrone | Aspergillus nidulans FGSC A4
BGC0001906.1 |  | 0.37 | Polyketide | naphthalene | Daldinia eschscholzii IFB-TL01
BGC0001257.1 |  | 0.37 | Polyketide | 1,3,6,8-tetrahydroxynaphthalene | Nodulisporium sp. ATCC74245
BGC0001258.1 |  | 0.37 | Polyketide | 1,3,6,8-tetrahydroxynaphthalene | Glarea lozoyensis
BGC0001366.1 |  | 0.35 | Polyketide | BE-24566B, zunyimycin A | Streptomyces sp. FJS31-2
BGC0000383.1 |  | 0.33 | NRP, Polyketide | luminmycin A | Photorhabdus laumondii subsp. laumondii TTO1
BGC0001133.1 |  | 0.32 | NRP | taxlllaid A | Xenorhabdus bovienii SS-2004

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP094241.1 - Region 6 - arylpolyene,resorcinol
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,912,448 - 1,964,545 nt. (total: 52,098 nt) Show pHMM detection rules used
resorcinol: DarB
arylpolyene: (APE_KS1 or APE_KS2)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | resorcinol | arylpolyene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | --- | ---
BGC0000880.1 |  |  | 0.34 | Other (Nucleoside) | tunicamycin B1 | Streptomyces chartreusis NRRL 3882
BGC0001526.1 |  |  | 0.32 | Other | bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K | Synechocystis salina LEGE 06099
BGC0001618.1 |  |  | 0.32 | RiPP | hyicin 3682 | Staphylococcus hyicus
BGC0000837.1 |  |  | 0.32 | Other | APE Vf | Aliivibrio fischeri ES114
BGC0000602.1 |  |  | 0.32 | RiPP | subtilosin A | Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0000568.1 |  |  | 0.32 | RiPP | microcin B17 | Escherichia coli
BGC0001291.1 |  |  | 0.32 | RiPP | enterocin NKR-5-3B | Enterococcus faecium
BGC0000486.1 |  |  | 0.31 | RiPP | butyrivibriocin AR10 | Butyrivibrio fibrisolvens
BGC0001525.1 |  |  | 0.31 | Other | bartoloside 2, bartoloside 3, bartoloside 4 | Synechocystis salina LEGE 06155
BGC0000620.1 |  |  | 0.31 | RiPP | lacticin Q | Lactococcus lactis

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000255.1 |  | 0.60 | Polyketide | pederin | Uncultured bacterium
BGC0000880.1 |  | 0.54 | Other (Nucleoside) | tunicamycin B1 | Streptomyces chartreusis NRRL 3882
BGC0000874.1 |  | 0.51 | Other | blasticidin S | Streptomyces griseochromogenes
BGC0000837.1 |  | 0.50 | Other | APE Vf | Aliivibrio fischeri ES114
BGC0000602.1 |  | 0.48 | RiPP | subtilosin A | Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001927.1 |  | 0.47 | Other | A-94964 | Streptomyces sp.
BGC0001526.1 |  | 0.47 | Other | bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K | Synechocystis salina LEGE 06099
BGC0001618.1 |  | 0.47 | RiPP | hyicin 3682 | Staphylococcus hyicus
BGC0000568.1 |  | 0.46 | RiPP | microcin B17 | Escherichia coli
BGC0001291.1 |  | 0.46 | RiPP | enterocin NKR-5-3B | Enterococcus faecium

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP094241.1 - Region 7 - hserlactone
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 2,127,062 - 2,147,811 nt. (total: 20,750 nt) Show pHMM detection rules used
hserlactone: Autoind_synth

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | hserlactone | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001682.1 |  | 0.34 | Other | N-acyl lysine/ornithine | Pseudomonas aeruginosa LESB58
BGC0001133.1 |  | 0.09 | NRP | taxlllaid A | Xenorhabdus bovienii SS-2004
BGC0001430.1 |  | 0.08 | NRP, Polyketide | myxochromide S | Stigmatella aurantiaca Sg a15
BGC0000385.1 |  | 0.05 | NRP | lysobactin | Lysobacter sp. ATCC 53042

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001682.1 |  | 0.67 | Other | N-acyl lysine/ornithine | Pseudomonas aeruginosa LESB58
BGC0001133.1 |  | 0.33 | NRP | taxlllaid A | Xenorhabdus bovienii SS-2004
BGC0001430.1 |  | 0.31 | NRP, Polyketide | myxochromide S | Stigmatella aurantiaca Sg a15
BGC0000385.1 |  | 0.22 | NRP | lysobactin | Lysobacter sp. ATCC 53042

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
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Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names