GCF_900454435.1_55147_F01_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_UGRT01000001 (original name was: NZ_UGRT01000001.1)

Region	Type	From	To
Region 6.1	terpene	70,422	107,802
Region 6.2	hserlactone	626,242	646,991
Region 6.3	RiPP-like	1,437,490	1,448,332

Region	Type	From	To	Similarity
Region 6.1	terpene	70,422	107,802
Region 6.2	hserlactone	626,242	646,991
Region 6.3	RiPP-like	1,437,490	1,448,332

No secondary metabolite regions were found in these records:: NZ_UGRT01000006 (original name was: NZ_UGRT01000006.1); NZ_UGRT01000005 (original name was: NZ_UGRT01000005.1); NZ_UGRT01000004 (original name was: NZ_UGRT01000004.1); NZ_UGRT01000003 (original name was: NZ_UGRT01000003.1); NZ_UGRT01000002 (original name was: NZ_UGRT01000002.1)

Compact view

c00006_NZ_UGRT.. - Region 1 - terpene

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Location: 70,422 - 107,802 nt. (total: 37,381 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.34	Terpene	carotenoid	Myxococcus xanthus
BGC0000647.1	0.33	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000630.1	0.25	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.24	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.24	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000633.1	0.24	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.23	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000640.1	0.23	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000635.1	0.22	Terpene	carotenoid	Paracoccus sp. N81106
BGC0000639.1	0.21	Terpene	carotenoid	Enterobacteriaceae bacterium DC260

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.67	Terpene	carotenoid	Myxococcus xanthus
BGC0000647.1	0.66	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000630.1	0.59	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.57	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.57	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000633.1	0.57	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.57	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000640.1	0.56	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000635.1	0.55	Terpene	carotenoid	Paracoccus sp. N81106
BGC0000639.1	0.54	Terpene	carotenoid	Enterobacteriaceae bacterium DC260

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00006_NZ_UGRT.. - Region 2 - hserlactone

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Location: 626,242 - 646,991 nt. (total: 20,750 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001682.1	0.34	Other	N-acyl lysine/ornithine	Pseudomonas aeruginosa LESB58
BGC0001526.1	0.17	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000592.1	0.16	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0000521.1	0.16	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0001210.1	0.16	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000513.1	0.15	RiPP	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0000504.1	0.15	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000551.1	0.15	RiPP	SapB	Streptomyces coelicolor A3(2)

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001682.1	0.67	Other	N-acyl lysine/ornithine	Pseudomonas aeruginosa LESB58
BGC0001526.1	0.48	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000500.1	0.47	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000592.1	0.46	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0000521.1	0.46	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0001210.1	0.46	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000513.1	0.46	RiPP	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000551.1	0.45	RiPP	SapB	Streptomyces coelicolor A3(2)

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00006_NZ_UGRT.. - Region 3 - RiPP-like

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Location: 1,437,490 - 1,448,332 nt. (total: 10,843 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000472.1	0.09	RiPP	anacyclamide A10	Anabaena sp. 90
BGC0001133.1	0.05	NRP	taxlllaid A	Xenorhabdus bovienii SS-2004
BGC0000565.1	0.04	RiPP	goadsporin	Streptomyces sp. TP-A0584

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000472.1	0.33	RiPP	anacyclamide A10	Anabaena sp. 90
BGC0001133.1	0.23	NRP	taxlllaid A	Xenorhabdus bovienii SS-2004
BGC0000565.1	0.19	RiPP	goadsporin	Streptomyces sp. TP-A0584

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names