GCF_008330805.1_ASM833080v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP021520.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	terpene	716,240	735,904
Region 2	terpene	1,120,085	1,140,897
Region 3	arylpolyene	1,301,003	1,342,139	APE Ec	Other	10%
Region 4	RiPP-like	1,884,987	1,895,829

NZ_CP021520.1 - Region 1 - terpene

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Location: 716,240 - 735,904 nt. (total: 19,665 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.33	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.29	Terpene	carotenoid	Myxococcus xanthus
BGC0000630.1	0.21	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000640.1	0.20	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000656.1	0.19	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000643.1	0.18	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000646.1	0.18	Terpene	β-carotein	uncultured bacterium
BGC0000634.1	0.18	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000664.1	0.17	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1	0.17	Terpene	carotenoid	Streptomyces avermitilis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.66	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.62	Terpene	carotenoid	Myxococcus xanthus
BGC0000630.1	0.54	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000640.1	0.52	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000656.1	0.51	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000643.1	0.50	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000646.1	0.49	Terpene	β-carotein	uncultured bacterium
BGC0000634.1	0.49	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000664.1	0.48	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1	0.48	Terpene	carotenoid	Streptomyces avermitilis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP021520.1 - Region 2 - terpene

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Location: 1,120,085 - 1,140,897 nt. (total: 20,813 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.24	Terpene	carotenoid	Myxococcus xanthus
BGC0000922.1	0.20	Other	pseudomonas quinolone signal (PQS)	Pseudomonas aeruginosa PAO1
BGC0000779.1	0.18	Saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000780.1	0.17	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000664.1	0.15	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1	0.15	Terpene	carotenoid	Streptomyces avermitilis
BGC0000918.1	0.14	Other	ochronotic pigment	Streptomyces avermitilis
BGC0001227.1	0.14	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.1	0.13	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000649.1	0.11	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.57	Terpene	carotenoid	Myxococcus xanthus
BGC0000922.1	0.53	Other	pseudomonas quinolone signal (PQS)	Pseudomonas aeruginosa PAO1
BGC0000779.1	0.49	Saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000780.1	0.49	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000664.1	0.45	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1	0.44	Terpene	carotenoid	Streptomyces avermitilis
BGC0000918.1	0.44	Other	ochronotic pigment	Streptomyces avermitilis
BGC0001227.1	0.43	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0001456.1	0.41	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000649.1	0.38	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP021520.1 - Region 3 - arylpolyene

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Location: 1,301,003 - 1,342,139 nt. (total: 41,137 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000851.1	0.19	Other	albonoursin	Streptomyces noursei ATCC 11455
BGC0000756.1	0.19	Saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0000768.1	0.17	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0000889.1	0.16	Other	bagremycin A, bagremycin B	Streptomyces sp. WK-5344
BGC0001917.1	0.15	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0001314.1	0.15	Terpene	tirucalla	Arabidopsis thaliana
BGC0000243.1	0.14	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001156.1	0.14	Terpene	platencin	Streptomyces platensis
BGC0001387.1	0.14	Other	nucleocidin	Streptomyces calvus
BGC0001897.1	0.14	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000851.1	0.52	Other	albonoursin	Streptomyces noursei ATCC 11455
BGC0000756.1	0.51	Saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0000768.1	0.48	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0000889.1	0.46	Other	bagremycin A, bagremycin B	Streptomyces sp. WK-5344
BGC0001917.1	0.45	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0001314.1	0.44	Terpene	tirucalla	Arabidopsis thaliana
BGC0000243.1	0.44	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001156.1	0.44	Terpene	platencin	Streptomyces platensis
BGC0001387.1	0.44	Other	nucleocidin	Streptomyces calvus
BGC0001897.1	0.44	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP021520.1 - Region 4 - RiPP-like

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Location: 1,884,987 - 1,895,829 nt. (total: 10,843 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000756.1	0.19	Saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0001314.1	0.16	Terpene	tirucalla	Arabidopsis thaliana
BGC0001650.1	0.04	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000756.1	0.51	Saccharide	capsular polysaccharide	Avibacterium paragallinarum
BGC0001314.1	0.46	Terpene	tirucalla	Arabidopsis thaliana
BGC0001650.1	0.20	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names