GCF_003351565.1_ASM335156v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP031253.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	terpene	745,929	765,588
Region 2	terpene	1,226,392	1,247,204
Region 3	arylpolyene	1,412,386	1,463,104	APE Vf	Other	25%
Region 4	RiPP-like	2,073,768	2,084,610

NZ_CP031253.1 - Region 1 - terpene

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Location: 745,929 - 765,588 nt. (total: 19,660 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.34	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.33	Terpene	carotenoid	Myxococcus xanthus
BGC0000634.1	0.21	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.21	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000630.1	0.21	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.21	Terpene	β-carotein	uncultured bacterium
BGC0000664.1	0.20	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1	0.20	Terpene	carotenoid	Streptomyces avermitilis
BGC0000640.1	0.19	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000635.1	0.19	Terpene	carotenoid	Paracoccus sp. N81106

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.67	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.66	Terpene	carotenoid	Myxococcus xanthus
BGC0000634.1	0.54	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.53	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000630.1	0.53	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.53	Terpene	β-carotein	uncultured bacterium
BGC0000664.1	0.52	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000633.1	0.52	Terpene	carotenoid	Streptomyces avermitilis
BGC0000640.1	0.52	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000635.1	0.51	Terpene	carotenoid	Paracoccus sp. N81106

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP031253.1 - Region 2 - terpene

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Location: 1,226,392 - 1,247,204 nt. (total: 20,813 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.28	Terpene	carotenoid	Myxococcus xanthus
BGC0000922.1	0.20	Other	pseudomonas quinolone signal (PQS)	Pseudomonas aeruginosa PAO1
BGC0000633.1	0.18	Terpene	carotenoid	Streptomyces avermitilis
BGC0000779.1	0.18	Saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000780.1	0.18	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000664.1	0.17	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.1	0.17	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001227.1	0.16	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000918.1	0.14	Other	ochronotic pigment	Streptomyces avermitilis
BGC0000649.1	0.13	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.62	Terpene	carotenoid	Myxococcus xanthus
BGC0000922.1	0.53	Other	pseudomonas quinolone signal (PQS)	Pseudomonas aeruginosa PAO1
BGC0000633.1	0.49	Terpene	carotenoid	Streptomyces avermitilis
BGC0000779.1	0.49	Saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000780.1	0.49	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000664.1	0.49	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.1	0.48	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001227.1	0.47	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000918.1	0.44	Other	ochronotic pigment	Streptomyces avermitilis
BGC0000649.1	0.42	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP031253.1 - Region 3 - arylpolyene

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Location: 1,412,386 - 1,463,104 nt. (total: 50,719 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001075.1	0.27	Terpene, Polyketide	aurachin RE	Rhodococcus erythropolis
BGC0000231.1	0.24	Polyketide	griseusin	Streptomyces griseus
BGC0000234.1	0.23	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001197.1	0.22	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000204.1	0.22	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0001897.1	0.22	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001947.1	0.21	Saccharide	K53 capsular polysaccharide	Acinetobacter baumannii
BGC0000889.1	0.21	Other	bagremycin A, bagremycin B	Streptomyces sp. WK-5344
BGC0000248.1	0.21	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000272.1	0.21	Polyketide	spore pigment	Streptomyces collinus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001075.1	0.61	Terpene, Polyketide	aurachin RE	Rhodococcus erythropolis
BGC0000231.1	0.57	Polyketide	griseusin	Streptomyces griseus
BGC0000234.1	0.56	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001197.1	0.55	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000204.1	0.55	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0001897.1	0.54	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001947.1	0.54	Saccharide	K53 capsular polysaccharide	Acinetobacter baumannii
BGC0000889.1	0.54	Other	bagremycin A, bagremycin B	Streptomyces sp. WK-5344
BGC0000248.1	0.54	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000272.1	0.54	Polyketide	spore pigment	Streptomyces collinus

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP031253.1 - Region 4 - RiPP-like

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Location: 2,073,768 - 2,084,610 nt. (total: 10,843 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	RiPP-like	Similarity score	Type	Compound(s)	Organism
BGC0001314.1		0.16	Terpene	tirucalla	Arabidopsis thaliana
BGC0001650.1		0.04	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0001314.1		0.46	Terpene	tirucalla	Arabidopsis thaliana
BGC0001650.1		0.20	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names