GCF_900130065.1_IMG-taxon_2585428085_annotated_assembly_genomic - 7 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_FQXV01000003 (original name was: NZ_FQXV01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	cyclic-lactone-autoinducer	1	17,996
Region 11.2	ranthipeptide	114,732	136,141	TP-1161	RiPP:Thiopeptide	8%

NZ_FQXV01000017 (original name was: NZ_FQXV01000017.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	cyclic-lactone-autoinducer	38,800	61,739

NZ_FQXV01000006 (original name was: NZ_FQXV01000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	NRPS	55,328	102,329

NZ_FQXV01000011 (original name was: NZ_FQXV01000011.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	ranthipeptide	32,326	53,960

NZ_FQXV01000014 (original name was: NZ_FQXV01000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	betalactone	25,411	49,330

NZ_FQXV01000019 (original name was: NZ_FQXV01000019.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	RRE-containing	1	16,610

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	cyclic-lactone-autoinducer	1	17,996
Region 11.2	ranthipeptide	114,732	136,141	TP-1161	RiPP:Thiopeptide	8%
Region 17.1	cyclic-lactone-autoinducer	38,800	61,739
Region 20.1	NRPS	55,328	102,329
Region 25.1	ranthipeptide	32,326	53,960
Region 26.1	betalactone	25,411	49,330
Region 35.1	RRE-containing	1	16,610

No secondary metabolite regions were found in these records:: NZ_FQXV01000034 (original name was: NZ_FQXV01000034.1); NZ_FQXV01000033 (original name was: NZ_FQXV01000033.1); NZ_FQXV01000032 (original name was: NZ_FQXV01000032.1); NZ_FQXV01000031 (original name was: NZ_FQXV01000031.1); NZ_FQXV01000029 (original name was: NZ_FQXV01000029.1); NZ_FQXV01000027 (original name was: NZ_FQXV01000027.1); NZ_FQXV01000023 (original name was: NZ_FQXV01000023.1); NZ_FQXV01000037 (original name was: NZ_FQXV01000037.1); NZ_FQXV01000009 (original name was: NZ_FQXV01000009.1); NZ_FQXV01000026 (original name was: NZ_FQXV01000026.1); NZ_FQXV01000007 (original name was: NZ_FQXV01000007.1); NZ_FQXV01000036 (original name was: NZ_FQXV01000036.1); NZ_FQXV01000025 (original name was: NZ_FQXV01000025.1); NZ_FQXV01000021 (original name was: NZ_FQXV01000021.1); NZ_FQXV01000028 (original name was: NZ_FQXV01000028.1); NZ_FQXV01000004 (original name was: NZ_FQXV01000004.1); NZ_FQXV01000008 (original name was: NZ_FQXV01000008.1); NZ_FQXV01000002 (original name was: NZ_FQXV01000002.1); NZ_FQXV01000022 (original name was: NZ_FQXV01000022.1); NZ_FQXV01000010 (original name was: NZ_FQXV01000010.1); NZ_FQXV01000013 (original name was: NZ_FQXV01000013.1); NZ_FQXV01000012 (original name was: NZ_FQXV01000012.1); NZ_FQXV01000018 (original name was: NZ_FQXV01000018.1); NZ_FQXV01000001 (original name was: NZ_FQXV01000001.1); NZ_FQXV01000015 (original name was: NZ_FQXV01000015.1); NZ_FQXV01000030 (original name was: NZ_FQXV01000030.1); NZ_FQXV01000016 (original name was: NZ_FQXV01000016.1); NZ_FQXV01000035 (original name was: NZ_FQXV01000035.1); NZ_FQXV01000005 (original name was: NZ_FQXV01000005.1); NZ_FQXV01000024 (original name was: NZ_FQXV01000024.1); NZ_FQXV01000020 (original name was: NZ_FQXV01000020.1)

Compact view

c00011_NZ_FQXV.. - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 17,996 nt. (total: 17,996 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.22	RiPP	circularin A	Clostridium beijerinckii
BGC0000500.1	0.20	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000504.1	0.19	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000600.1	0.17	RiPP	thurincin H	Bacillus thuringiensis
BGC0000487.1	0.17	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000502.1	0.17	RiPP	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0001862.1	0.17	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.17	RiPP	pallidocin	Aeribacillus pallidus
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001576.1	0.16	RiPP	divamide A	Prochloron didemni

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.54	RiPP	circularin A	Clostridium beijerinckii
BGC0000500.1	0.52	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000504.1	0.52	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000600.1	0.49	RiPP	thurincin H	Bacillus thuringiensis
BGC0000487.1	0.48	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000502.1	0.48	RiPP	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0001862.1	0.48	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.48	RiPP	pallidocin	Aeribacillus pallidus
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001576.1	0.47	RiPP	divamide A	Prochloron didemni

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00011_NZ_FQXV.. - Region 2 - ranthipeptide

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Location: 114,732 - 136,141 nt. (total: 21,410 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000551.1	0.16	RiPP	SapB	Streptomyces coelicolor A3(2)
BGC0000501.1	0.16	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000513.1	0.16	RiPP	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0000558.1	0.16	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000489.1	0.15	RiPP	enterocin AS-48	Enterococcus faecalis
BGC0000519.1	0.15	RiPP	labyrinthopeptin A2, labyrinthopeptin A1, labyrinthopeptin A3	Actinomadura namibiensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000551.1	0.47	RiPP	SapB	Streptomyces coelicolor A3(2)
BGC0000501.1	0.47	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000500.1	0.47	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0001120.1	0.46	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000513.1	0.46	RiPP	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0000558.1	0.46	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000489.1	0.46	RiPP	enterocin AS-48	Enterococcus faecalis
BGC0000519.1	0.46	RiPP	labyrinthopeptin A2, labyrinthopeptin A1, labyrinthopeptin A3	Actinomadura namibiensis

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00017_NZ_FQXV.. - Region 1 - cyclic-lactone-autoinducer

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Location: 38,800 - 61,739 nt. (total: 22,940 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000758.1	0.15	Saccharide	capsular polysaccharide	Staphylococcus aureus
BGC0001476.1	0.11	Other (Nucleoside)	pseudouridimycin	Streptomyces sp.
BGC0000678.1	0.11	Terpene	pentalenolactone	Streptomyces avermitilis MA-4680 = NBRC 14893
BGC0000506.1	0.10	RiPP	entianin	Bacillus subtilis subsp. spizizenii
BGC0001995.1	0.09	Terpene	heptelidic acid	Aspergillus oryzae RIB40
BGC0000277.1	0.09	Polyketide	urdamycin	Streptomyces fradiae
BGC0000486.1	0.09	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000605.1	0.08	RiPP	GE37468	Streptomyces sp. ATCC 55365
BGC0000864.1	0.08	Other	eicosapentaenoic acid-like compound	Moritella marina ATCC 15381
BGC0001860.1	0.08	RiPP	thiomuracin	Thermobispora bispora DSM 43833

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000758.1	0.45	Saccharide	capsular polysaccharide	Staphylococcus aureus
BGC0001476.1	0.38	Other (Nucleoside)	pseudouridimycin	Streptomyces sp.
BGC0000678.1	0.37	Terpene	pentalenolactone	Streptomyces avermitilis MA-4680 = NBRC 14893
BGC0000506.1	0.35	RiPP	entianin	Bacillus subtilis subsp. spizizenii
BGC0001995.1	0.34	Terpene	heptelidic acid	Aspergillus oryzae RIB40
BGC0000277.1	0.33	Polyketide	urdamycin	Streptomyces fradiae
BGC0000486.1	0.33	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000605.1	0.31	RiPP	GE37468	Streptomyces sp. ATCC 55365
BGC0000864.1	0.30	Other	eicosapentaenoic acid-like compound	Moritella marina ATCC 15381
BGC0001860.1	0.30	RiPP	thiomuracin	Thermobispora bispora DSM 43833

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00020_NZ_FQXV.. - Region 1 - NRPS

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Location: 55,328 - 102,329 nt. (total: 47,002 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001615.1	0.33	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0000417.1	0.30	NRP	rhodochelin	Rhodococcus jostii RHA1
BGC0001149.1	0.29	NRP, Saccharide	brabantamide A	Pseudomonas sp. SHC52
BGC0001890.1	0.29	NRP	amphi-enterobactin 1, amphi-enterobactin 2, amphi-enterobactin 3, amphi-enterobactin 4	Vibrio campbellii ATCC BAA-1116
BGC0001185.1	0.27	NRP	bacillibactin	Bacillus velezensis FZB42
BGC0001132.1	0.27	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001833.1	0.27	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001825.1	0.27	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0000309.1	0.27	NRP	bacillibactin	Bacillus subtilis subsp. subtilis str. 168
BGC0000401.1	0.27	NRP	paenibactin	Paenibacillus elgii B69

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001615.1	0.66	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0000417.1	0.64	NRP	rhodochelin	Rhodococcus jostii RHA1
BGC0001149.1	0.63	NRP, Saccharide	brabantamide A	Pseudomonas sp. SHC52
BGC0001890.1	0.62	NRP	amphi-enterobactin 1, amphi-enterobactin 2, amphi-enterobactin 3, amphi-enterobactin 4	Vibrio campbellii ATCC BAA-1116
BGC0001185.1	0.61	NRP	bacillibactin	Bacillus velezensis FZB42
BGC0001132.1	0.61	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001833.1	0.61	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001825.1	0.60	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0000309.1	0.60	NRP	bacillibactin	Bacillus subtilis subsp. subtilis str. 168
BGC0000401.1	0.60	NRP	paenibactin	Paenibacillus elgii B69

Similar known gene clusters

No matches found.

Module view

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Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 55327 - 102329:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - thr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg20_72

Search NORINE for peptide: strict or relaxed

AMP-binding (466..869): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DpWHFcmVEK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 70% (weak)

AMP-binding (1511..1907): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

c00025_NZ_FQXV.. - Region 1 - ranthipeptide

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Location: 32,326 - 53,960 nt. (total: 21,635 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000600.1	0.21	RiPP	thurincin H	Bacillus thuringiensis
BGC0001483.1	0.20	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0000601.1	0.19	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0000938.1	0.18	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0000599.1	0.18	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0000807.1	0.17	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0001525.1	0.16	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000496.1	0.16	RiPP	AmfS	Streptomyces griseus subsp. griseus NBRC 13350

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000600.1	0.54	RiPP	thurincin H	Bacillus thuringiensis
BGC0001483.1	0.52	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0000601.1	0.51	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0000938.1	0.50	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0000599.1	0.49	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0000807.1	0.48	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0001525.1	0.47	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000496.1	0.47	RiPP	AmfS	Streptomyces griseus subsp. griseus NBRC 13350

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00026_NZ_FQXV.. - Region 1 - betalactone

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Location: 25,411 - 49,330 nt. (total: 23,920 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001314.1	0.17	Terpene	tirucalla	Arabidopsis thaliana
BGC0000131.1	0.15	Polyketide	pyrrolomycin	Streptomyces sp. UC 11065
BGC0000805.1	0.14	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672
BGC0000597.1	0.14	RiPP	SWA-2138	Streptomyces sp. e14
BGC0000595.1	0.13	RiPP	SCO-2138	Streptomyces coelicolor A3(2)
BGC0000596.1	0.13	RiPP	SLI-2138	Streptomyces lividans TK24
BGC0001150.1	0.13	Polyketide	pamamycin-607	Streptomyces alboniger
BGC0001140.1	0.13	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0001411.1	0.13	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000892.1	0.13	Other	caryoynencin	Burkholderia gladioli BSR3

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001314.1	0.48	Terpene	tirucalla	Arabidopsis thaliana
BGC0000131.1	0.45	Polyketide	pyrrolomycin	Streptomyces sp. UC 11065
BGC0000805.1	0.44	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672
BGC0000597.1	0.44	RiPP	SWA-2138	Streptomyces sp. e14
BGC0000595.1	0.42	RiPP	SCO-2138	Streptomyces coelicolor A3(2)
BGC0000596.1	0.42	RiPP	SLI-2138	Streptomyces lividans TK24
BGC0001150.1	0.42	Polyketide	pamamycin-607	Streptomyces alboniger
BGC0001140.1	0.41	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0001411.1	0.41	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000892.1	0.41	Other	caryoynencin	Burkholderia gladioli BSR3

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00035_NZ_FQXV.. - Region 1 - RRE-containing

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Location: 1 - 16,610 nt. (total: 16,610 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene details

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MIBiG comparison

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Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000539.1	0.16	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000486.1	0.16	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000563.1	0.16	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000521.1	0.16	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0001863.1	0.16	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000487.1	0.15	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0001210.1	0.15	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000522.1	0.15	RiPP	lacticin Z	Lactococcus lactis
BGC0000554.1	0.15	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000539.1	0.47	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000486.1	0.47	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0001551.1	0.46	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000563.1	0.46	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000521.1	0.46	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0001863.1	0.46	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000487.1	0.46	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0001210.1	0.46	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000522.1	0.46	RiPP	lacticin Z	Lactococcus lactis
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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