GCF_000243015.1_Prev_macu_OT_289_V1_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_JH594500.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	arylpolyene	1	21,698	flexirubin	Polyketide	8%
Region 1.2	RRE-containing	214,666	234,932

NZ_JH594509.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	arylpolyene	1	26,061	flexirubin	Other	12%

No secondary metabolite regions were found in these records:: NZ_JH594501.1; NZ_JH594502.1; NZ_JH594503.1; NZ_JH594504.1; NZ_JH594505.1; NZ_JH594506.1; NZ_JH594507.1; NZ_JH594508.1; NZ_JH594510.1; NZ_JH594511.1; NZ_JH594512.1; NZ_JH594513.1; NZ_JH594514.1; NZ_JH594515.1; NZ_JH594516.1; NZ_JH594517.1; NZ_JH594518.1; NZ_JH594519.1; NZ_JH594520.1

Compact view

NZ_JH594500.1 - Region 1 - arylpolyene

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Location: 1 - 21,698 nt. (total: 21,698 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000836.1	0.21	Other	APE Ec	Escherichia coli CFT073
BGC0002008.1	0.21	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000272.1	0.19	Polyketide	spore pigment	Streptomyces collinus
BGC0000248.1	0.17	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000231.1	0.17	Polyketide	griseusin	Streptomyces griseus
BGC0000234.1	0.17	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001197.1	0.16	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000228.1	0.16	Polyketide	granaticin	Streptomyces violaceoruber
BGC0000840.1	0.16	Other	xanthomonadin I	Xanthomonas oryzae pv. oryzae
BGC0001917.1	0.15	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000836.1	0.54	Other	APE Ec	Escherichia coli CFT073
BGC0002008.1	0.54	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000272.1	0.51	Polyketide	spore pigment	Streptomyces collinus
BGC0000248.1	0.48	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000231.1	0.48	Polyketide	griseusin	Streptomyces griseus
BGC0000234.1	0.48	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0001197.1	0.47	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000228.1	0.47	Polyketide	granaticin	Streptomyces violaceoruber
BGC0000840.1	0.47	Other	xanthomonadin I	Xanthomonas oryzae pv. oryzae
BGC0001917.1	0.46	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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NZ_JH594500.1 - Region 2 - RRE-containing

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Location: 214,666 - 234,932 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001411.1	0.23	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000772.1	0.21	Saccharide	lipopolysaccharide	Brucella melitensis
BGC0000732.1	0.20	Saccharide	capsular polysaccharide	Raoultella planticola
BGC0000733.1	0.20	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000795.1	0.19	Saccharide	S-layer glycan	Aneurinibacillus thermoaerophilus
BGC0000769.1	0.19	Saccharide	glycopeptidolipid	Mycobacterium avium subsp. hominissuis A5
BGC0001138.1	0.18	Other (Nucleoside)	a201a	Marinactinospora thermotolerans
BGC0000698.1	0.18	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0000761.1	0.15	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0000773.1	0.15	Saccharide	lipopolysaccharide	Escherichia coli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001411.1	0.56	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000772.1	0.53	Saccharide	lipopolysaccharide	Brucella melitensis
BGC0000732.1	0.52	Saccharide	capsular polysaccharide	Raoultella planticola
BGC0000733.1	0.52	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000795.1	0.52	Saccharide	S-layer glycan	Aneurinibacillus thermoaerophilus
BGC0000769.1	0.51	Saccharide	glycopeptidolipid	Mycobacterium avium subsp. hominissuis A5
BGC0001138.1	0.50	Other (Nucleoside)	a201a	Marinactinospora thermotolerans
BGC0000698.1	0.50	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0000761.1	0.45	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0000773.1	0.45	Saccharide	lipopolysaccharide	Escherichia coli

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_JH594509.1 - Region 1 - arylpolyene

Download region GenBank file

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Location: 1 - 26,061 nt. (total: 26,061 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000886.1	0.21	Other	allylmalonyl-CoA	Streptomyces tsukubensis
BGC0000248.1	0.21	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000272.1	0.21	Polyketide	spore pigment	Streptomyces collinus
BGC0000219.1	0.19	Polyketide, Saccharide	elloramycin	Streptomyces olivaceus
BGC0000760.1	0.19	Saccharide	emulsan	Acinetobacter venetianus RAG-1 = CIP 110063
BGC0000261.1	0.18	Polyketide	R1128	Streptomyces sp. R1128
BGC0000228.1	0.18	Polyketide	granaticin	Streptomyces violaceoruber
BGC0000873.1	0.18	Other	A-201A	Saccharothrix mutabilis subsp. capreolus
BGC0000231.1	0.18	Polyketide	griseusin	Streptomyces griseus
BGC0000839.1	0.18	Other	flexirubin	Chitinophaga pinensis DSM 2588

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000886.1	0.54	Other	allylmalonyl-CoA	Streptomyces tsukubensis
BGC0000248.1	0.54	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000272.1	0.54	Polyketide	spore pigment	Streptomyces collinus
BGC0000219.1	0.51	Polyketide, Saccharide	elloramycin	Streptomyces olivaceus
BGC0000760.1	0.51	Saccharide	emulsan	Acinetobacter venetianus RAG-1 = CIP 110063
BGC0000261.1	0.50	Polyketide	R1128	Streptomyces sp. R1128
BGC0000228.1	0.50	Polyketide	granaticin	Streptomyces violaceoruber
BGC0000873.1	0.49	Other	A-201A	Saccharothrix mutabilis subsp. capreolus
BGC0000231.1	0.49	Polyketide	griseusin	Streptomyces griseus
BGC0000839.1	0.49	Other	flexirubin	Chitinophaga pinensis DSM 2588

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

Expand to show all names