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Overview
1.1
1.2
1.3
1.4

### Identified secondary metabolite regions using strictness 'relaxed'

NC_014387.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | NRPS | 305,838 | 363,384 |
Region 1.2 | RRE-containing | 1,226,005 | 1,244,280 |
Region 1.3 | ranthipeptide | 2,425,157 | 2,446,899 |
Region 1.4 | lassopeptide,RRE-containing | 2,900,191 | 2,926,460 | capsular polysaccharide | Saccharide | 40%

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | NRPS | 305,838 | 363,384 |
Region 1.2 | RRE-containing | 1,226,005 | 1,244,280 |
Region 1.3 | ranthipeptide | 2,425,157 | 2,446,899 |
Region 1.4 | lassopeptide,RRE-containing | 2,900,191 | 2,926,460 | capsular polysaccharide | Saccharide | 40%

No secondary metabolite regions were found in these records:
  NC_014388.1
  NC_014390.1
  NC_014389.1

Compact view
NC_014387.1 - Region 1 - NRPS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 305,838 - 363,384 nt. (total: 57,547 nt) Show pHMM detection rules used
NRPS: cds(Condensation and (AMP-binding or A-OX))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
NRPS/PKS domains
MIBiG comparison
KnownClusterBlast
NRPS/PKS modules
Pfam domains
TIGRFAM domains
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | NRPS | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001479.1 |  | 0.25 | NRP | anabaenopeptin NZ857, nostamide A | Nostoc punctiforme PCC 73102
BGC0001185.1 |  | 0.24 | NRP | bacillibactin | Bacillus velezensis FZB42
BGC0001833.1 |  | 0.23 | NRP | icosalide A, icosalide B | Burkholderia gladioli
BGC0000401.1 |  | 0.23 | NRP | paenibactin | Paenibacillus elgii B69
BGC0001132.1 |  | 0.22 | NRP | xenotetrapeptide | Xenorhabdus nematophila ATCC 19061
BGC0001128.1 |  | 0.22 | NRP | luminmide | Photorhabdus laumondii subsp. laumondii TTO1
BGC0000309.1 |  | 0.22 | NRP | bacillibactin | Bacillus subtilis subsp. subtilis str. 168
BGC0001844.1 |  | 0.22 | NRP | holrhizin | Paraburkholderia rhizoxinica HKI 454
BGC0001131.1 |  | 0.22 | NRP | ambactin | Xenorhabdus miraniensis
BGC0001767.1 |  | 0.21 | NRP | salinichelins | Salinispora pacifica CNY331

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001479.1 |  | 0.59 | NRP | anabaenopeptin NZ857, nostamide A | Nostoc punctiforme PCC 73102
BGC0001185.1 |  | 0.57 | NRP | bacillibactin | Bacillus velezensis FZB42
BGC0001833.1 |  | 0.56 | NRP | icosalide A, icosalide B | Burkholderia gladioli
BGC0000401.1 |  | 0.56 | NRP | paenibactin | Paenibacillus elgii B69
BGC0001132.1 |  | 0.55 | NRP | xenotetrapeptide | Xenorhabdus nematophila ATCC 19061
BGC0001128.1 |  | 0.55 | NRP | luminmide | Photorhabdus laumondii subsp. laumondii TTO1
BGC0000309.1 |  | 0.55 | NRP | bacillibactin | Bacillus subtilis subsp. subtilis str. 168
BGC0001844.1 |  | 0.55 | NRP | holrhizin | Paraburkholderia rhizoxinica HKI 454
BGC0001131.1 |  | 0.55 | NRP | ambactin | Xenorhabdus miraniensis
BGC0001767.1 |  | 0.54 | NRP | salinichelins | Salinispora pacifica CNY331

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Module view
Shows module structures for each candidate in NRPS- and PKS regions. Genes are shown in predicted order, and are only present when containing at least one complete module. A domain glossary is available here.
Legend
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NRPS/PKS products
NRPS/PKS monomers
Predicted core structure(s)
Shows estimated product structure and polymer for each candidate cluster in the region. To show the product, click on the expander or the candidate cluster feature drawn in the overview.
For candidate cluster 1, location 305837 - 363384:
Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:
  (X - X - X - tyr - D-X)

Direct lookup in NORINE database: strict or relaxed
Link to NORINE database query form
NRPS/PKS monomer predictions
Shows the predicted monomers for each adynelation domain and acyltransferase within genes. Each gene prediction can be expanded to view detailed predictions of each domain. Each prediction can be expanded to view the predictions by tool (and, for some tools, further expanded for extra details).

ctg1_248: X
  Search NORINE for peptide: strict or relaxed
  AMP-binding (58..458): X
  NRPSPredictor2: (unknown)
  SVM prediction details:
    NOTE: outside applicability domain
    Predicted physicochemical class:
      hydrophobic-aliphatic
    Large clusters prediction:
      N/A
    Small clusters prediction:
      N/A
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      gLTvIGgpiK
    Nearest Stachelhaus code:
      asn
    Stachelhaus code match:
      50% (weak)
ctg1_251: X
  Search NORINE for peptide: strict or relaxed
  AMP-binding (95..534): X
  NRPSPredictor2: (unknown)
  SVM prediction details:
    NOTE: outside applicability domain
    Predicted physicochemical class:
      N/A
    Large clusters prediction:
      N/A
    Small clusters prediction:
      val, leu, ile, abu, iva
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      gFnFiGggaK
    Nearest Stachelhaus code:
      pip
    Stachelhaus code match:
      40% (weak)
ctg1_253: X - X - X - tyr - X
  Search NORINE for peptide: strict or relaxed
  AMP-binding (442..811): X
  NRPSPredictor2: tyr, bht
  SVM prediction details:
    Predicted physicochemical class:
      hydrophilic
    Large clusters prediction:
      phe, trp, phg, tyr, bht
    Small clusters prediction:
      tyr, bht
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAdtMGGvCK
    Nearest Stachelhaus code:
      phe
    Stachelhaus code match:
      70% (weak)
  AMP-binding (1431..1801): X
  NRPSPredictor2: val, leu, ile, abu, iva
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic
    Large clusters prediction:
      gly, ala, val, leu, ile, abu, iva
    Small clusters prediction:
      val, leu, ile, abu, iva
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DgiFmGImFK
    Nearest Stachelhaus code:
      ile
    Stachelhaus code match:
      60% (weak)
  AMP-binding (2423..2791): X
  NRPSPredictor2: (unknown)
  SVM prediction details:
    NOTE: outside applicability domain
    Predicted physicochemical class:
      hydrophobic-aliphatic
    Large clusters prediction:
      N/A
    Small clusters prediction:
      N/A
    Single AA prediction:
      tyr
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DSEgTikniK
    Nearest Stachelhaus code:
      his
    Stachelhaus code match:
      50% (weak)
  AMP-binding (3409..3782): tyr
  NRPSPredictor2: tyr
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic
    Large clusters prediction:
      N/A
    Small clusters prediction:
      N/A
    Single AA prediction:
      tyr
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DVdHrStVDK
    Nearest Stachelhaus code:
      ser
    Stachelhaus code match:
      70% (weak)
  AMP-binding (4399..4767): X
  NRPSPredictor2: (unknown)
  SVM prediction details:
    NOTE: outside applicability domain
    Predicted physicochemical class:
      hydrophilic
    Large clusters prediction:
      phe, trp, phg, tyr, bht
    Small clusters prediction:
      tyr, bht
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DgdtMGGvCK
    Nearest Stachelhaus code:
      phe
    Stachelhaus code match:
      60% (weak)

NC_014387.1 - Region 2 - RRE-containing
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,226,005 - 1,244,280 nt. (total: 18,276 nt) Show pHMM detection rules used
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | RRE-containing | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000592.1 |  | 0.15 | RiPP | microviridin B | Microcystis aeruginosa NIES-298
BGC0001407.1 |  | 0.15 | RiPP | bicereucin | Bacillus cereus SJ1
BGC0000766.1 |  | 0.14 | Saccharide | exopolysaccharide | Lactobacillus johnsonii
BGC0000623.1 |  | 0.13 | RiPP | plantaricin W α, plantaricin W β | Lactobacillus plantarum
BGC0000703.1 |  | 0.13 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0002009.1 |  | 0.13 | Polyketide | kanglemycin A, kanglemycin V1, kanglemycin V2 | Amycolatopsis vancoresmycina
BGC0000560.1 |  | 0.13 | RiPP | subtilomycin | Bacillus subtilis
BGC0000543.1 |  | 0.13 | RiPP | pep5 | Staphylococcus epidermidis
BGC0001210.1 |  | 0.12 | RiPP | pseudomycoicidin | Bacillus pseudomycoides DSM 12442
BGC0000521.1 |  | 0.12 | RiPP | lacticin 481 | Lactococcus lactis subsp. lactis

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000592.1 |  | 0.45 | RiPP | microviridin B | Microcystis aeruginosa NIES-298
BGC0001407.1 |  | 0.45 | RiPP | bicereucin | Bacillus cereus SJ1
BGC0000766.1 |  | 0.43 | Saccharide | exopolysaccharide | Lactobacillus johnsonii
BGC0000623.1 |  | 0.42 | RiPP | plantaricin W α, plantaricin W β | Lactobacillus plantarum
BGC0000703.1 |  | 0.41 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0002009.1 |  | 0.41 | Polyketide | kanglemycin A, kanglemycin V1, kanglemycin V2 | Amycolatopsis vancoresmycina
BGC0000560.1 |  | 0.41 | RiPP | subtilomycin | Bacillus subtilis
BGC0000543.1 |  | 0.41 | RiPP | pep5 | Staphylococcus epidermidis
BGC0001210.1 |  | 0.40 | RiPP | pseudomycoicidin | Bacillus pseudomycoides DSM 12442
BGC0000521.1 |  | 0.39 | RiPP | lacticin 481 | Lactococcus lactis subsp. lactis

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
NC_014387.1 - Region 3 - ranthipeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 2,425,157 - 2,446,899 nt. (total: 21,743 nt) Show pHMM detection rules used
ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | ranthipeptide | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000599.1 |  | 0.13 | RiPP | thuricin CD α, thuricin CD β | Bacillus thuringiensis
BGC0002034.1 |  | 0.08 | Other | perquinoline A, perquinoline B, perquinoline C | Streptomyces sp. IB2014 016-6
BGC0000273.1 |  | 0.07 | Polyketide, Saccharide | steffimycin D | Streptomyces steffisburgensis
BGC0002026.1 |  | 0.06 | NRP | thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2 | Jahnella sp. MSr9139
BGC0001211.1 |  | 0.06 | NRP | albachelin | Amycolatopsis alba DSM 44262
BGC0000344.1 |  | 0.05 | NRP | entolysin | Pseudomonas entomophila L48
BGC0000203.1 |  | 0.05 | Polyketide | BE-7585A | Amycolatopsis orientalis subsp. vinearia
BGC0000413.1 |  | 0.03 | NRP | pyoverdin | Pseudomonas protegens Pf-5

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000599.1 |  | 0.42 | RiPP | thuricin CD α, thuricin CD β | Bacillus thuringiensis
BGC0002034.1 |  | 0.30 | Other | perquinoline A, perquinoline B, perquinoline C | Streptomyces sp. IB2014 016-6
BGC0000273.1 |  | 0.27 | Polyketide, Saccharide | steffimycin D | Streptomyces steffisburgensis
BGC0002026.1 |  | 0.26 | NRP | thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2 | Jahnella sp. MSr9139
BGC0001211.1 |  | 0.26 | NRP | albachelin | Amycolatopsis alba DSM 44262
BGC0000344.1 |  | 0.23 | NRP | entolysin | Pseudomonas entomophila L48
BGC0000203.1 |  | 0.21 | Polyketide | BE-7585A | Amycolatopsis orientalis subsp. vinearia
BGC0000413.1 |  | 0.17 | NRP | pyoverdin | Pseudomonas protegens Pf-5

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NC_014387.1 - Region 4 - RRE-containing,lassopeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 2,900,191 - 2,926,460 nt. (total: 26,270 nt) Show pHMM detection rules used
lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Lasso peptides
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | lassopeptide | RRE-containing | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | --- | ---
BGC0001356.1 |  |  | 0.61 | RiPP | paeninodin | Paenibacillus dendritiformis C454
BGC0001634.1 |  |  | 0.61 | RiPP | keywimysin | Streptomyces sp. NRRL F-5702
BGC0001645.1 |  |  | 0.54 | RiPP | lagmysin | Streptomyces sp. NRRL S-118
BGC0000742.1 |  |  | 0.41 | Saccharide | capsular polysaccharide | Streptococcus agalactiae
BGC0000743.1 |  |  | 0.41 | Saccharide | capsular polysaccharide | Streptococcus agalactiae
BGC0000578.1 |  |  | 0.40 | RiPP | SRO15-2005 | Streptomyces filamentosus NRRL 15998
BGC0001894.1 |  |  | 0.39 | Saccharide | heteropolysaccharide (HePS) | Lactobacillus plantarum
BGC0000763.1 |  |  | 0.36 | Saccharide | stewartan | Pantoea stewartii subsp. stewartii DC283
BGC0000803.1 |  |  | 0.32 | Saccharide | GG exopolysaccharide | Lactobacillus rhamnosus GG
BGC0001410.1 |  |  | 0.32 | Saccharide | polysaccharide A | Bacteroides fragilis

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001356.1 |  | 0.64 | RiPP | paeninodin | Paenibacillus dendritiformis C454
BGC0001634.1 |  | 0.64 | RiPP | keywimysin | Streptomyces sp. NRRL F-5702
BGC0001645.1 |  | 0.61 | RiPP | lagmysin | Streptomyces sp. NRRL S-118
BGC0000742.1 |  | 0.53 | Saccharide | capsular polysaccharide | Streptococcus agalactiae
BGC0000743.1 |  | 0.53 | Saccharide | capsular polysaccharide | Streptococcus agalactiae
BGC0000578.1 |  | 0.53 | RiPP | SRO15-2005 | Streptomyces filamentosus NRRL 15998
BGC0001894.1 |  | 0.51 | Saccharide | heteropolysaccharide (HePS) | Lactobacillus plantarum
BGC0000763.1 |  | 0.50 | Saccharide | stewartan | Pantoea stewartii subsp. stewartii DC283
BGC0000803.1 |  | 0.47 | Saccharide | GG exopolysaccharide | Lactobacillus rhamnosus GG
BGC0001410.1 |  | 0.47 | Saccharide | polysaccharide A | Bacteroides fragilis

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Lasso peptide predictions
Lists the possible core peptides for each biosynthetic enzyme, including the predicted class. Each core peptide shows the leader and core peptide sequences, separated by a dash.
Lassopeptides - No core peptides found.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
Lasso peptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists the number of disulfide bridges, possible molecular weights, and the scores for cleavage site prediction and RODEO.
No core peptides found.