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Overview
11.1

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_PKGT01000006 (original name was: NZ_PKGT01000006.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 11.1 | T3PKS | 58,340 | 87,492 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 11.1 | T3PKS | 58,340 | 87,492 |

No secondary metabolite regions were found in these records:
  NZ_PKGT01000001 (original name was: NZ_PKGT01000001.1)
  NZ_PKGT01000010 (original name was: NZ_PKGT01000010.1)
  NZ_PKGT01000011 (original name was: NZ_PKGT01000011.1)
  NZ_PKGT01000012 (original name was: NZ_PKGT01000012.1)
  NZ_PKGT01000013 (original name was: NZ_PKGT01000013.1)
  NZ_PKGT01000014 (original name was: NZ_PKGT01000014.1)
  NZ_PKGT01000002 (original name was: NZ_PKGT01000002.1)
  NZ_PKGT01000003 (original name was: NZ_PKGT01000003.1)
  NZ_PKGT01000004 (original name was: NZ_PKGT01000004.1)
  NZ_PKGT01000005 (original name was: NZ_PKGT01000005.1)
  NZ_PKGT01000007 (original name was: NZ_PKGT01000007.1)
  NZ_PKGT01000008 (original name was: NZ_PKGT01000008.1)
  NZ_PKGT01000009 (original name was: NZ_PKGT01000009.1)

Compact view
c00011_NZ_PKGT.. - Region 1 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
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Location: 58,340 - 87,492 nt. (total: 29,153 nt) Show pHMM detection rules used
Region on contig edge.
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
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Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
NRPS/PKS domains
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
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Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | T3PKS | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000851.1 |  | 0.19 | Other | albonoursin | Streptomyces noursei ATCC 11455
BGC0000286.1 |  | 0.19 | Polyketide | viguiepinol | Streptomyces sp. KO-3988
BGC0000866.1 |  | 0.18 | Other | polyhydroxyalkanoate | Burkholderia sp. DSM 9242
BGC0000867.1 |  | 0.18 | Other | polyhydroxyalkanoic acids | Ectothiorhodospira shaposhnikovii
BGC0001120.1 |  | 0.16 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264
BGC0000528.1 |  | 0.16 | RiPP | michiganin A | Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000205.1 |  | 0.16 | Polyketide | bryostatin | Candidatus Endobugula sertula
BGC0000934.1 |  | 0.15 | Other (Phenazine) | 5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G | Kitasatospora sp. HKI 714
BGC0001783.1 |  | 0.14 | Other | streptonigrin | Streptomyces flocculus
BGC0001928.1 |  | 0.13 | Other | (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid | Streptomyces sp. MA37

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000851.1 |  | 0.52 | Other | albonoursin | Streptomyces noursei ATCC 11455
BGC0000286.1 |  | 0.51 | Polyketide | viguiepinol | Streptomyces sp. KO-3988
BGC0000866.1 |  | 0.50 | Other | polyhydroxyalkanoate | Burkholderia sp. DSM 9242
BGC0000867.1 |  | 0.49 | Other | polyhydroxyalkanoic acids | Ectothiorhodospira shaposhnikovii
BGC0001120.1 |  | 0.47 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264
BGC0000528.1 |  | 0.46 | RiPP | michiganin A | Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000205.1 |  | 0.46 | Polyketide | bryostatin | Candidatus Endobugula sertula
BGC0000934.1 |  | 0.45 | Other (Phenazine) | 5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G | Kitasatospora sp. HKI 714
BGC0001783.1 |  | 0.43 | Other | streptonigrin | Streptomyces flocculus
BGC0001928.1 |  | 0.42 | Other | (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid | Streptomyces sp. MA37

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names