Select genomic region:
Overview
8.1
16.1
32.1
33.1
44.1

### Identified secondary metabolite regions using strictness 'relaxed'

c00008_NZ_JAHH.. (original name was: NZ_JAHHXM010000017.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 8.1 | terpene | 31,238 | 52,065 | basiliskamide A / basiliskamide B | Polyketide | 9%

c00016_NZ_JAHH.. (original name was: NZ_JAHHXM010000024.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 16.1 | ectoine | 18,099 | 28,485 | ectoine | Other | 66%

c00032_NZ_JAHH.. (original name was: NZ_JAHHXM010000039.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 32.1 | T3PKS | 1 | 29,071 |

c00033_NZ_JAHH.. (original name was: NZ_JAHHXM010000003.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 33.1 | T3PKS | 19,353 | 60,441 |

c00044_NZ_JAHH.. (original name was: NZ_JAHHXM010000004.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 44.1 | terpene | 146,962 | 168,851 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 8.1 | terpene | 31,238 | 52,065 | basiliskamide A / basiliskamide B | Polyketide | 9%
Region 16.1 | ectoine | 18,099 | 28,485 | ectoine | Other | 66%
Region 32.1 | T3PKS | 1 | 29,071 |
Region 33.1 | T3PKS | 19,353 | 60,441 |
Region 44.1 | terpene | 146,962 | 168,851 |

No secondary metabolite regions were found in these records:
  c00001_NZ_JAHH.. (original name was: NZ_JAHHXM010000010.1)
  c00002_NZ_JAHH.. (original name was: NZ_JAHHXM010000011.1)
  c00003_NZ_JAHH.. (original name was: NZ_JAHHXM010000012.1)
  c00004_NZ_JAHH.. (original name was: NZ_JAHHXM010000013.1)
  c00005_NZ_JAHH.. (original name was: NZ_JAHHXM010000014.1)
  c00006_NZ_JAHH.. (original name was: NZ_JAHHXM010000015.1)
  c00007_NZ_JAHH.. (original name was: NZ_JAHHXM010000016.1)
  c00009_NZ_JAHH.. (original name was: NZ_JAHHXM010000018.1)
  c00010_NZ_JAHH.. (original name was: NZ_JAHHXM010000019.1)
  c00011_NZ_JAHH.. (original name was: NZ_JAHHXM010000001.1)
  c00012_NZ_JAHH.. (original name was: NZ_JAHHXM010000020.1)
  c00013_NZ_JAHH.. (original name was: NZ_JAHHXM010000021.1)
  c00014_NZ_JAHH.. (original name was: NZ_JAHHXM010000022.1)
  c00015_NZ_JAHH.. (original name was: NZ_JAHHXM010000023.1)
  c00017_NZ_JAHH.. (original name was: NZ_JAHHXM010000025.1)
  c00018_NZ_JAHH.. (original name was: NZ_JAHHXM010000026.1)
  c00019_NZ_JAHH.. (original name was: NZ_JAHHXM010000027.1)
  c00020_NZ_JAHH.. (original name was: NZ_JAHHXM010000028.1)
  c00021_NZ_JAHH.. (original name was: NZ_JAHHXM010000029.1)
  c00022_NZ_JAHH.. (original name was: NZ_JAHHXM010000002.1)
  c00023_NZ_JAHH.. (original name was: NZ_JAHHXM010000030.1)
  c00024_NZ_JAHH.. (original name was: NZ_JAHHXM010000031.1)
  c00025_NZ_JAHH.. (original name was: NZ_JAHHXM010000032.1)
  c00026_NZ_JAHH.. (original name was: NZ_JAHHXM010000033.1)
  c00027_NZ_JAHH.. (original name was: NZ_JAHHXM010000034.1)
  c00028_NZ_JAHH.. (original name was: NZ_JAHHXM010000035.1)
  c00029_NZ_JAHH.. (original name was: NZ_JAHHXM010000036.1)
  c00030_NZ_JAHH.. (original name was: NZ_JAHHXM010000037.1)
  c00031_NZ_JAHH.. (original name was: NZ_JAHHXM010000038.1)
  c00034_NZ_JAHH.. (original name was: NZ_JAHHXM010000040.1)
  c00035_NZ_JAHH.. (original name was: NZ_JAHHXM010000041.1)
  c00036_NZ_JAHH.. (original name was: NZ_JAHHXM010000042.1)
  c00037_NZ_JAHH.. (original name was: NZ_JAHHXM010000043.1)
  c00038_NZ_JAHH.. (original name was: NZ_JAHHXM010000044.1)
  c00039_NZ_JAHH.. (original name was: NZ_JAHHXM010000045.1)
  c00040_NZ_JAHH.. (original name was: NZ_JAHHXM010000046.1)
  c00041_NZ_JAHH.. (original name was: NZ_JAHHXM010000047.1)
  c00042_NZ_JAHH.. (original name was: NZ_JAHHXM010000048.1)
  c00043_NZ_JAHH.. (original name was: NZ_JAHHXM010000049.1)
  c00045_NZ_JAHH.. (original name was: NZ_JAHHXM010000050.1)
  c00046_NZ_JAHH.. (original name was: NZ_JAHHXM010000051.1)
  c00047_NZ_JAHH.. (original name was: NZ_JAHHXM010000052.1)
  c00048_NZ_JAHH.. (original name was: NZ_JAHHXM010000053.1)
  c00049_NZ_JAHH.. (original name was: NZ_JAHHXM010000054.1)
  c00050_NZ_JAHH.. (original name was: NZ_JAHHXM010000055.1)
  c00051_NZ_JAHH.. (original name was: NZ_JAHHXM010000056.1)
  c00052_NZ_JAHH.. (original name was: NZ_JAHHXM010000057.1)
  c00053_NZ_JAHH.. (original name was: NZ_JAHHXM010000058.1)
  c00054_NZ_JAHH.. (original name was: NZ_JAHHXM010000059.1)
  c00055_NZ_JAHH.. (original name was: NZ_JAHHXM010000005.1)
  c00056_NZ_JAHH.. (original name was: NZ_JAHHXM010000060.1)
  c00057_NZ_JAHH.. (original name was: NZ_JAHHXM010000061.1)
  c00058_NZ_JAHH.. (original name was: NZ_JAHHXM010000062.1)
  c00059_NZ_JAHH.. (original name was: NZ_JAHHXM010000063.1)
  c00060_NZ_JAHH.. (original name was: NZ_JAHHXM010000064.1)
  c00061_NZ_JAHH.. (original name was: NZ_JAHHXM010000065.1)
  c00062_NZ_JAHH.. (original name was: NZ_JAHHXM010000066.1)
  c00063_NZ_JAHH.. (original name was: NZ_JAHHXM010000067.1)
  c00064_NZ_JAHH.. (original name was: NZ_JAHHXM010000068.1)
  c00065_NZ_JAHH.. (original name was: NZ_JAHHXM010000069.1)
  c00066_NZ_JAHH.. (original name was: NZ_JAHHXM010000006.1)
  c00067_NZ_JAHH.. (original name was: NZ_JAHHXM010000070.1)
  c00068_NZ_JAHH.. (original name was: NZ_JAHHXM010000071.1)
  c00069_NZ_JAHH.. (original name was: NZ_JAHHXM010000072.1)
  c00070_NZ_JAHH.. (original name was: NZ_JAHHXM010000073.1)
  c00071_NZ_JAHH.. (original name was: NZ_JAHHXM010000074.1)
  c00072_NZ_JAHH.. (original name was: NZ_JAHHXM010000075.1)
  c00073_NZ_JAHH.. (original name was: NZ_JAHHXM010000076.1)
  c00074_NZ_JAHH.. (original name was: NZ_JAHHXM010000077.1)
  c00075_NZ_JAHH.. (original name was: NZ_JAHHXM010000078.1)
  c00076_NZ_JAHH.. (original name was: NZ_JAHHXM010000079.1)
  c00077_NZ_JAHH.. (original name was: NZ_JAHHXM010000007.1)
  c00078_NZ_JAHH.. (original name was: NZ_JAHHXM010000080.1)
  c00079_NZ_JAHH.. (original name was: NZ_JAHHXM010000008.1)
  c00080_NZ_JAHH.. (original name was: NZ_JAHHXM010000009.1)

Compact view
c00008_NZ_JAHH.. - Region 1 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 31,238 - 52,065 nt. (total: 20,828 nt) Show pHMM detection rules used
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | terpene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001839.1 |  | 0.32 | Terpene | squalestatin S1 | Aspergillus sp. Z5
BGC0000888.1 |  | 0.16 | Other | bacilysin | Bacillus sp. CS93
BGC0000667.1 |  | 0.16 | Terpene | PR-toxin | Penicillium roqueforti FM164
BGC0000766.1 |  | 0.16 | Saccharide | exopolysaccharide | Lactobacillus johnsonii
BGC0001485.1 |  | 0.15 | Other | 3-demethylchuangxinmycin | Actinoplanes tsinanensis
BGC0000887.1 |  | 0.15 | Alkaloid | saxitoxin, gonyautoxin 2, gonyautoxin 3, toxin C2, toxin C3, gonyautoxin 5, decarbamoylsaxitoxin, decarbamoylgonyautoxin 2, decarbamoylgonyautoxin 3 | Dolichospermum circinale AWQC131C
BGC0001924.1 |  | 0.14 | Terpene | ascofuranone | Acremonium egyptiacum
BGC0000928.1 |  | 0.14 | Other | T3 toxin | Cylindrospermopsis raciborskii T3
BGC0000188.1 |  | 0.14 | Alkaloid | saxitoxin, neosaxitoxin, decarbamoylsaxitoxin, gonyautoxin 3, gonyautoxin 2 | Cylindrospermopsis raciborskii T3
BGC0001615.1 |  | 0.14 | NRP | hexose-palythine-serine, hexose-shinorine | Heteroscytonema crispum UCFS10

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001839.1 |  | 0.66 | Terpene | squalestatin S1 | Aspergillus sp. Z5
BGC0000888.1 |  | 0.47 | Other | bacilysin | Bacillus sp. CS93
BGC0000667.1 |  | 0.47 | Terpene | PR-toxin | Penicillium roqueforti FM164
BGC0000766.1 |  | 0.46 | Saccharide | exopolysaccharide | Lactobacillus johnsonii
BGC0001485.1 |  | 0.46 | Other | 3-demethylchuangxinmycin | Actinoplanes tsinanensis
BGC0000887.1 |  | 0.45 | Alkaloid | saxitoxin, gonyautoxin 2, gonyautoxin 3, toxin C2, toxin C3, gonyautoxin 5, decarbamoylsaxitoxin, decarbamoylgonyautoxin 2, decarbamoylgonyautoxin 3 | Dolichospermum circinale AWQC131C
BGC0001924.1 |  | 0.44 | Terpene | ascofuranone | Acremonium egyptiacum
BGC0000928.1 |  | 0.44 | Other | T3 toxin | Cylindrospermopsis raciborskii T3
BGC0000188.1 |  | 0.44 | Alkaloid | saxitoxin, neosaxitoxin, decarbamoylsaxitoxin, gonyautoxin 3, gonyautoxin 2 | Cylindrospermopsis raciborskii T3
BGC0001615.1 |  | 0.44 | NRP | hexose-palythine-serine, hexose-shinorine | Heteroscytonema crispum UCFS10

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00016_NZ_JAHH.. - Region 1 - ectoine
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 18,099 - 28,485 nt. (total: 10,387 nt) Show pHMM detection rules used
ectoine: ectoine_synt

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | ectoine | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000852.1 |  | 0.53 | Other | ectoine | Sporosarcina pasteurii
BGC0000853.1 |  | 0.41 | Other | ectoine | Streptomyces anulatus
BGC0000858.1 |  | 0.40 | Other | ectoine | Methylobacter marinus
BGC0000855.1 |  | 0.40 | Other | ectoine | Methylomicrobium kenyense
BGC0000859.1 |  | 0.40 | Other | ectoine | Methylomicrobium alcaliphilum
BGC0000856.1 |  | 0.40 | Other | ectoine | Methylophaga thalassica
BGC0000857.1 |  | 0.30 | Other | ectoine | Methylophaga alcalica
BGC0000854.1 |  | 0.28 | Other | ectoine | Methylomicrobium alcaliphilum 20Z
BGC0000860.1 |  | 0.26 | Other | ectoine | Methylarcula marina
BGC0000703.1 |  | 0.16 | Saccharide | kanamycin | Streptomyces kanamyceticus

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000852.1 |  | 0.80 | Other | ectoine | Sporosarcina pasteurii
BGC0000853.1 |  | 0.72 | Other | ectoine | Streptomyces anulatus
BGC0000858.1 |  | 0.72 | Other | ectoine | Methylobacter marinus
BGC0000855.1 |  | 0.72 | Other | ectoine | Methylomicrobium kenyense
BGC0000859.1 |  | 0.72 | Other | ectoine | Methylomicrobium alcaliphilum
BGC0000856.1 |  | 0.72 | Other | ectoine | Methylophaga thalassica
BGC0000857.1 |  | 0.64 | Other | ectoine | Methylophaga alcalica
BGC0000854.1 |  | 0.62 | Other | ectoine | Methylomicrobium alcaliphilum 20Z
BGC0000860.1 |  | 0.59 | Other | ectoine | Methylarcula marina
BGC0000703.1 |  | 0.47 | Saccharide | kanamycin | Streptomyces kanamyceticus

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00032_NZ_JAHH.. - Region 1 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 29,071 nt. (total: 29,071 nt) Show pHMM detection rules used
Region on contig edge.
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
NRPS/PKS domains
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | T3PKS | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000286.1 |  | 0.23 | Polyketide | viguiepinol | Streptomyces sp. KO-3988
BGC0000255.1 |  | 0.17 | Polyketide | pederin | Uncultured bacterium
BGC0000249.1 |  | 0.17 | Polyketide | nogalamycin | Streptomyces nogalater
BGC0001588.1 |  | 0.17 | Saccharide | exopolysaccharides | Burkholderia pseudomallei 1026b
BGC0000243.1 |  | 0.17 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus
BGC0001589.1 |  | 0.16 | Saccharide | exopolysaccharides | Burkholderia cenocepacia J2315
BGC0000205.1 |  | 0.16 | Polyketide | bryostatin | Candidatus Endobugula sertula
BGC0000904.1 |  | 0.16 | Other | FR-900098 | Streptomyces rubellomurinus
BGC0001080.1 |  | 0.15 | Other (Phenazine) | endophenazine A, endophenazine B | Streptomyces anulatus
BGC0001485.1 |  | 0.14 | Other | 3-demethylchuangxinmycin | Actinoplanes tsinanensis

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000286.1 |  | 0.56 | Polyketide | viguiepinol | Streptomyces sp. KO-3988
BGC0000255.1 |  | 0.48 | Polyketide | pederin | Uncultured bacterium
BGC0000249.1 |  | 0.48 | Polyketide | nogalamycin | Streptomyces nogalater
BGC0001588.1 |  | 0.48 | Saccharide | exopolysaccharides | Burkholderia pseudomallei 1026b
BGC0000243.1 |  | 0.48 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus
BGC0001589.1 |  | 0.47 | Saccharide | exopolysaccharides | Burkholderia cenocepacia J2315
BGC0000205.1 |  | 0.46 | Polyketide | bryostatin | Candidatus Endobugula sertula
BGC0000904.1 |  | 0.46 | Other | FR-900098 | Streptomyces rubellomurinus
BGC0001080.1 |  | 0.44 | Other (Phenazine) | endophenazine A, endophenazine B | Streptomyces anulatus
BGC0001485.1 |  | 0.44 | Other | 3-demethylchuangxinmycin | Actinoplanes tsinanensis

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00033_NZ_JAHH.. - Region 1 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 19,353 - 60,441 nt. (total: 41,089 nt) Show pHMM detection rules used
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
NRPS/PKS domains
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | T3PKS | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000282.1 |  | 0.35 | Polyketide | alkylresorcinol | Streptomyces griseus subsp. griseus NBRC 13350
BGC0001938.1 |  | 0.31 | Polyketide | entotheonella | Candidatus Entotheonella serta
BGC0001831.1 |  | 0.27 | Polyketide | alkylpyrone-407, alkylpyrone-393 | Myxococcus xanthus DK 1622
BGC0001156.1 |  | 0.19 | Terpene | platencin | Streptomyces platensis
BGC0001140.1 |  | 0.19 | Terpene | platensimycin, platencin | Streptomyces platensis
BGC0000905.1 |  | 0.19 | Other | heme D1 | Heliobacillus mobilis
BGC0000466.1 |  | 0.18 | NRP | yatakemycin | Streptomyces sp. TP-A2060
BGC0001868.1 |  | 0.17 | Other (Phenazine) | iodinin | Xenorhabdus szentirmaii DSM 16338
BGC0001882.1 |  | 0.15 | Polyketide | chrysoxanthone A, chrysoxanthone B, chrysoxanthone C | Penicillium rubens Wisconsin 54-1255
BGC0001571.1 |  | 0.15 | Terpene | demethoxyviridin | Nodulisporium sp.

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000282.1 |  | 0.68 | Polyketide | alkylresorcinol | Streptomyces griseus subsp. griseus NBRC 13350
BGC0001938.1 |  | 0.65 | Polyketide | entotheonella | Candidatus Entotheonella serta
BGC0001831.1 |  | 0.60 | Polyketide | alkylpyrone-407, alkylpyrone-393 | Myxococcus xanthus DK 1622
BGC0001156.1 |  | 0.51 | Terpene | platencin | Streptomyces platensis
BGC0001140.1 |  | 0.51 | Terpene | platensimycin, platencin | Streptomyces platensis
BGC0000905.1 |  | 0.51 | Other | heme D1 | Heliobacillus mobilis
BGC0000466.1 |  | 0.49 | NRP | yatakemycin | Streptomyces sp. TP-A2060
BGC0001868.1 |  | 0.48 | Other (Phenazine) | iodinin | Xenorhabdus szentirmaii DSM 16338
BGC0001882.1 |  | 0.45 | Polyketide | chrysoxanthone A, chrysoxanthone B, chrysoxanthone C | Penicillium rubens Wisconsin 54-1255
BGC0001571.1 |  | 0.45 | Terpene | demethoxyviridin | Nodulisporium sp.

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
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Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00044_NZ_JAHH.. - Region 1 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
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Location: 146,962 - 168,851 nt. (total: 21,890 nt) Show pHMM detection rules used
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | terpene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000703.1 |  | 0.14 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0001476.1 |  | 0.09 | Other (Nucleoside) | pseudouridimycin | Streptomyces sp.
BGC0001277.1 |  | 0.08 | Terpene | nivalenol, vomitoxin, 3-acetyldeoxynivalenol, 15-acetyldeoxynivalenol, neosolaniol, calonectrin, apotrichodiol, isotrichotriol, 15-deacetylcalonectrin, T-2 toxin, 3-acetyl T-2 toxin, trichodiene | Fusarium graminearum
BGC0000430.1 |  | 0.07 | NRP, Polyketide | spumigin E | Nodularia spumigena CCY9414
BGC0000397.1 |  | 0.07 | NRP | nostocyclopeptide A2 | Nostoc sp. ATCC 53789
BGC0001449.1 |  | 0.05 | NRP, Polyketide, Alkaloid | ucs1025a | Thermothelomyces thermophilus
BGC0000839.1 |  | 0.05 | Other | flexirubin | Chitinophaga pinensis DSM 2588
BGC0000695.1 |  | 0.05 | Saccharide | fortimicin | Micromonospora olivasterospora
BGC0001028.1 |  | 0.05 | NRP, Polyketide | nostopeptolide A2 | Nostoc sp. GSV224
BGC0000838.1 |  | 0.05 | Polyketide | flexirubin | Flavobacterium johnsoniae UW101

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000703.1 |  | 0.44 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0001476.1 |  | 0.32 | Other (Nucleoside) | pseudouridimycin | Streptomyces sp.
BGC0001277.1 |  | 0.31 | Terpene | nivalenol, vomitoxin, 3-acetyldeoxynivalenol, 15-acetyldeoxynivalenol, neosolaniol, calonectrin, apotrichodiol, isotrichotriol, 15-deacetylcalonectrin, T-2 toxin, 3-acetyl T-2 toxin, trichodiene | Fusarium graminearum
BGC0000430.1 |  | 0.29 | NRP, Polyketide | spumigin E | Nodularia spumigena CCY9414
BGC0000397.1 |  | 0.29 | NRP | nostocyclopeptide A2 | Nostoc sp. ATCC 53789
BGC0001449.1 |  | 0.23 | NRP, Polyketide, Alkaloid | ucs1025a | Thermothelomyces thermophilus
BGC0000839.1 |  | 0.22 | Other | flexirubin | Chitinophaga pinensis DSM 2588
BGC0000695.1 |  | 0.21 | Saccharide | fortimicin | Micromonospora olivasterospora
BGC0001028.1 |  | 0.21 | NRP, Polyketide | nostopeptolide A2 | Nostoc sp. GSV224
BGC0000838.1 |  | 0.21 | Polyketide | flexirubin | Flavobacterium johnsoniae UW101

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names