LOCUS       NZ_KI260403.1           3415 bp    DNA     linear   UNK 01-JAN-1980
DEFINITION  NZ_KI260403.1 Ruminococcus callidus ATCC 27760 Scaffold3, whole
            genome shotgun sequence.
ACCESSION   NZ_KI260403
VERSION     NZ_KI260403.1
KEYWORDS    .
SOURCE      
  ORGANISM  
            .
COMMENT     ##antiSMASH-Data-START##
            Version      :: 6.1.1
            Run date     :: 2024-03-14 14:22:47
            NOTE: This is a single cluster extracted from a larger record!
            Orig. start  :: 0
            Orig. end    :: 3415
            ##antiSMASH-Data-END##
FEATURES             Location/Qualifiers
     protocluster    1..3415
                     /aStool="rule-based-clusters"
                     /category="RiPP"
                     /contig_edge="True"
                     /core_location="[2460:3178]"
                     /cutoff="20000"
                     /detection_rule="(TIGR04223 or AgrB)"
                     /neighbourhood="10000"
                     /product="cyclic-lactone-autoinducer"
                     /protocluster_number="1"
                     /tool="antismash"
     proto_core      2461..3178
                     /aStool="rule-based-clusters"
                     /tool="antismash"
                     /cutoff="20000"
                     /detection_rule="(TIGR04223 or AgrB)"
                     /neighbourhood="10000"
                     /product="cyclic-lactone-autoinducer"
                     /protocluster_number="1"
     cand_cluster    1..3415
                     /candidate_cluster_number="1"
                     /contig_edge="True"
                     /detection_rules="(TIGR04223 or AgrB)"
                     /kind="single"
                     /product="cyclic-lactone-autoinducer"
                     /protoclusters="1"
                     /tool="antismash"
     region          1..3415
                     /candidate_cluster_numbers="1"
                     /contig_edge="True"
                     /product="cyclic-lactone-autoinducer"
                     /region_number="1"
                     /rules="(TIGR04223 or AgrB)"
                     /tool="antismash"
     CDS             261..992
                     /locus_tag="ctg101_1"
                     /transl_table=11
                     /translation="MIQIAIVDDQTEAISGILSVFQQWEKENHVYFEIDTYTDADLFCD
                     AIFDKKYQALFLDLDMPKKSGFDISQFLRELGNNTPIVYITNRDDLMQKAFQYKVLGFV
                     RKDKIQEELPFAISCVVQEIQKKNSHVMIFAAHRQKKEYYNLPVSDILYIESENHQTKI
                     YTVSTKDAIITRDSLRSYMEKEEFQGFIPISVSCIVNIEHIFSIEKDTLVLDNKKVLFI
                     SRRKVKSVKEMFQQKTRRNII"
     PFAM_domain     270..602
                     /aSDomain="Response_reg"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF00072.26"
                     /description="Response regulator receiver domain"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg101_1_0001"
                     /evalue="4.20E-12"
                     /label="ctg101_1"
                     /locus_tag="ctg101_1"
                     /protein_end="114"
                     /protein_start="3"
                     /score="46.3"
                     /tool="antismash"
                     /translation="IAIVDDQTEAISGILSVFQQWEKENHVYFEIDTYTDADLFCDAIF
                     DKKYQALFLDLDMPKKSGFDISQFLRELGNNTPIVYITNRDDLMQKAFQYKVLGFVRKD
                     KIQEELP"
     PFAM_domain     684..962
                     /aSDomain="LytTR"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF04397.17"
                     /description="LytTr DNA-binding domain"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg101_1_0002"
                     /evalue="7.30E-18"
                     /label="ctg101_1"
                     /locus_tag="ctg101_1"
                     /protein_end="234"
                     /protein_start="141"
                     /score="64.7"
                     /tool="antismash"
                     /translation="EYYNLPVSDILYIESENHQTKIYTVSTKDAIITRDSLRSYMEKEE
                     FQGFIPISVSCIVNIEHIFSIEKDTLVLDNKKVLFISRRKVKSVKEMF"
     CDS             989..2296
                     /locus_tag="ctg101_2"
                     /transl_table=11
                     /translation="MIYTVSEWLATISESLIIFFFLVKILSYKTMARSKKIIGTVVFCC
                     LQCTSSLILDQFFVFEGLYVIITIFIYLLFCWIMLEKPIWLQTIVVLLIFACLFTINIS
                     TMLVTSLLIHSTSADVLLLRNPVRILLLFITKALLVFTLIILTNIFEKKKVIFHVSQCI
                     VMAIVLLTTFFAGVVLEEIVIDTDVASWEVSAIVICMIAINILLFFVLYLTSSRNRVEN
                     NQALLKLQIANEQQKLQDSIRWNTEVNTLRHDLKNHLLCISEYIRLQQTDTAMEYIEKL
                     TGQVKKELPYHMMTNSVAVNAILDLKKLVCDENQIDIKYFVLEELPKIDETDLCVILAN
                     LLDNAIEAASKEEKRQIRLSMEIIGNYFRIVVQNQIAESVLKNNKELGTTKKNRKIHGF
                     GLQSVEDAVERNDGMSNFSEENGWFVADVMLKIHES"
     PFAM_domain     1706..1852
                     /aSDomain="SPOB_a"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF14689.8"
                     /description="Sensor_kinase_SpoOB-type, alpha-helical
                     domain"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg101_2_0003"
                     /evalue="1.00E-07"
                     /label="ctg101_2"
                     /locus_tag="ctg101_2"
                     /protein_end="288"
                     /protein_start="239"
                     /score="31.5"
                     /tool="antismash"
                     /translation="DSIRWNTEVNTLRHDLKNHLLCISEYIRLQQTDTAMEYIEKLTGQ
                     VKKE"
     PFAM_domain     1976..2281
                     /aSDomain="HATPase_c_5"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF14501.8"
                     /description="GHKL domain"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg101_2_0004"
                     /evalue="8.40E-24"
                     /label="ctg101_2"
                     /locus_tag="ctg101_2"
                     /protein_end="431"
                     /protein_start="329"
                     /score="83.5"
                     /tool="antismash"
                     /translation="DETDLCVILANLLDNAIEAASKEEKRQIRLSMEIIGNYFRIVVQN
                     QIAESVLKNNKELGTTKKNRKIHGFGLQSVEDAVERNDGMSNFSEENGWFVADVMLK"
     CDS             2461..3099
                     /gene_functions="biosynthetic (rule-based-clusters)
                     cyclic-lactone-autoinducer: AgrB"
                     /gene_kind="biosynthetic"
                     /locus_tag="ctg101_3"
                     /sec_met_domain="AgrB (E-value: 3.4e-42, bitscore: 132.3,
                     seeds: 181, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MISFLSRSVVRSLIKNDAIEMEKAEVYQYGFEILFSSITTFLIAV
                     LSGVLLHCFTAAMLFFVIFATFRQICGGYHANHYWSCNLLFLLVINAVLVVYRFFPTDS
                     FTTMHYIFLSVSLLIICAYAPVENENKPLNAKQVLLFRKISRIIAILLTVISCLINILH
                     SPYVKLIDSTFLAISVSILVVGLKERREYNEKCKEEHFEDCCESRCKKC"
     PFAM_domain     2479..3003
                     /aSDomain="AgrB"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF04647.17"
                     /description="Accessory gene regulator B"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg101_3_0005"
                     /evalue="1.10E-38"
                     /label="ctg101_3"
                     /locus_tag="ctg101_3"
                     /protein_end="181"
                     /protein_start="6"
                     /score="132.5"
                     /tool="antismash"
                     /translation="RSVVRSLIKNDAIEMEKAEVYQYGFEILFSSITTFLIAVLSGVLL
                     HCFTAAMLFFVIFATFRQICGGYHANHYWSCNLLFLLVINAVLVVYRFFPTDSFTTMHY
                     IFLSVSLLIICAYAPVENENKPLNAKQVLLFRKISRIIAILLTVISCLINILHSPYVKL
                     IDSTFLAISVSI"
     CDS             3038..3178
                     /gene_functions="biosynthetic (rule-based-clusters)
                     cyclic-lactone-autoinducer: TIGR04223"
                     /gene_kind="biosynthetic"
                     /locus_tag="ctg101_4"
                     /sec_met_domain="TIGR04223 (E-value: 1.7e-13, bitscore:
                     39.0, seeds: 127, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MKSAKKSILKTVAKVGAKSAEIGASSASILGFHQPKEPKALQNLK
                     K"
     aSDomain        3053..3160
                     /aSDomain="TIGR04223"
                     /aSTool="tigrfam"
                     /description="quorum_AgrD: cyclic lactone autoinducer
                     peptide"
                     /detection="hmmscan"
                     /domain_id="TIGRFam_ctg101_4_0001"
                     /evalue="1.50E-10"
                     /identifier="TIGR04223"
                     /label="ctg101_4"
                     /locus_tag="ctg101_4"
                     /protein_end="41"
                     /protein_start="5"
                     /score="39.0"
                     /tool="antismash"
                     /translation="KSILKTVAKVGAKSAEIGASSASILGFHQPKEPKAL"
     CDS             3262..3414
                     /locus_tag="ctg101_5"
                     /transl_table=11
                     /translation="MKQTKKIIAALAAATMVASCAGVVASADEAVNAVNVSYSTVAETF
                     TAADGT"
ORIGIN
        1 aaatagagat agttctgttc ttgaaaatga aaaaatgact tttgctcgga taatattcca
       61 ataggcatat gttgctttgc atcacgtttt gcaggcaaat atcaaatttc tgatgatagg
      121 ctcttcccta cttatacaag aaaacggtat gtcctctgag gcataccgtt tctttgttta
      181 gcaaaataaa ttcttgcttt ttgaaaattt ttgtggtatg atggaaatga agcgaaaaag
      241 aagtaagagg agtatatcgt atgattcaaa tcgcaatcgt ggatgaccag acagaagcga
      301 tttcaggaat tctttctgta tttcaacaat gggaaaagga aaatcatgta tattttgaaa
      361 tagataccta cacagatgca gatttattct gtgatgcaat atttgataag aaatatcaag
      421 ctctcttttt ggatctggat atgcctaaaa aaagcggctt tgacatttct cagttcctgc
      481 gtgaacttgg aaataatacg ccgattgtct acatcacaaa tcgagatgac ttgatgcaaa
      541 aagcatttca atataaggta ctcggttttg ttcgtaaaga taagatacaa gaagaacttc
      601 cgtttgcaat ctcctgtgtg gttcaagaaa tacagaaaaa gaatagtcac gtcatgatat
      661 tcgcagcaca tcgtcaaaaa aaagaatatt ataatttacc agtttctgat attttgtata
      721 ttgaaagcga aaatcaccaa acaaaaatct atactgtcag cacaaaggat gcaatcatta
      781 caagagattc ccttcgttcc tatatggaaa aagaagaatt tcaaggcttt attccaatta
      841 gcgtaagctg tattgtaaat attgagcata ttttttcaat tgaaaaagat actctggtat
      901 tggacaataa aaaggttttg tttatcagtc gaagaaaagt caaatcagtc aaggaaatgt
      961 ttcaacaaaa aacaaggagg aatatcatat gatctacacc gtttcagaat ggttagccac
     1021 tatttcagag agtttgatta ttttcttctt tctagtcaag atcttgtcct ataaaaccat
     1081 ggcacgatct aaaaagataa ttggaacagt agttttttgt tgcttgcaat gcacctcttc
     1141 tttaatattg gatcaatttt ttgtgtttga aggactttat gtcattatca caatttttat
     1201 ttatcttctt ttctgttgga taatgttaga aaagcctata tggcttcaga caattgttgt
     1261 actcctcata tttgcctgtt tgtttacaat taacatttca acaatgttag tcacaagttt
     1321 gctcatacat agtacttcag cagatgtgct acttcttcga aatccagttc gtattttact
     1381 tttatttatt acaaaagctt tattggtttt tacattaatc atacttacca atatttttga
     1441 aaagaaaaaa gtgatatttc atgtttctca gtgtattgtt atggctattg ttcttttgac
     1501 tacttttttt gctggtgttg ttctagaaga aattgtaatt gacacagatg tagcaagctg
     1561 ggaagtttct gcaattgtaa tatgtatgat tgcaatcaac attttgttgt tttttgtgct
     1621 ttatcttact tcctccagaa atcgtgtaga aaacaatcag gcactattga aattacaaat
     1681 tgcaaacgaa cagcaaaaac ttcaggattc cattcgttgg aatacagaag taaatacact
     1741 gcgtcatgat ttgaaaaatc acttgctttg catttcggaa tatattcgtt tacaacagac
     1801 agatacagct atggaatata ttgagaaatt aaccggtcag gtgaaaaaag aattgccgta
     1861 tcatatgatg acgaattctg ttgcagtcaa tgctatttta gatttgaaaa aacttgtgtg
     1921 tgacgaaaat caaattgaca taaaatattt tgtgctggaa gaattgccga aaatagatga
     1981 aaccgatttg tgtgtaatat tagctaattt actggataat gcaatagagg ctgcatccaa
     2041 agaagaaaag cggcagattc gtctttccat ggaaatcatc ggcaactatt ttcggattgt
     2101 tgttcagaat caaattgcag agtcagtatt aaaaaacaac aaggaactag ggaccactaa
     2161 gaaaaatcga aaaatccatg gatttgggtt gcaaagtgta gaagatgctg ttgaaagaaa
     2221 cgatgggatg agcaatttct ctgaggaaaa tggttggttt gttgcagatg ttatgttaaa
     2281 aatccacgaa tcgtaaaaca aaatagaatg gtttttgatc cgccttatcg aaaaaataag
     2341 gcggattttt ttgctttttg accgattacg tcgtaaaaca taccgattac gtcataagta
     2401 ttgtatcttt cattttaatc agtataatga aattaaggga aacaaaagga ggtgttgcat
     2461 atgatttcat ttttatccag atcagttgta cggagtttga ttaaaaatga tgcaatcgaa
     2521 atggaaaagg cagaagttta tcagtatgga tttgaaattc tgttttcttc tattaccact
     2581 tttctgattg cagtactatc tggcgtttta ctgcattgtt ttactgcagc aatgcttttt
     2641 ttcgttatat ttgcaacgtt tcggcaaata tgcggaggat atcatgcaaa tcattattgg
     2701 agctgcaatt tactgttcct tttggtaatc aatgcggtat tggttgtata tcgtttcttt
     2761 cccactgaca gtttcacgac aatgcactat atttttctgt cagtttcact gttaattatc
     2821 tgtgcctatg caccggttga aaatgaaaat aaaccgctca atgcaaaaca ggtacttcta
     2881 tttcgtaaaa tcagcagaat cattgcaata ttactgacgg tgatttcttg cttgattaac
     2941 atattacata gtccctacgt aaaattgatc gatagcacat ttttggcgat ttctgtttca
     3001 attttagttg tgggattgaa agaaaggaga gagtataatg aaaagtgcaa agaagagcat
     3061 tttgaagact gttgcgaaag tcggtgcaaa aagtgctgag atcggagcta gttccgcatc
     3121 gattttgggc tttcaccagc cgaaagaacc gaaggctctg cagaatctga agaagtaatc
     3181 tggttgtaag attacaaaga aatccaaacg cagcggcaca cgtaagtgtg ctgttgtaat
     3241 ctaaaaaagg agttttttat catgaaacag acaaagaaga ttattgctgc tctggcagca
     3301 gccacaatgg tagcctcttg tgcaggcgtt gttgcaagtg cagatgaggc agtaaacgca
     3361 gtcaacgtat cctacagcac tgtagcagaa acattcaccg ccgctgacgg cacag
//
