GCF_022179445.1_ASM2217944v1_genomic - 9 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_BPQU01000001 (original name was: NZ_BPQU01000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	hserlactone	180,513	201,136

NZ_BPQU01000003 (original name was: NZ_BPQU01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	terpene	293,265	314,335	carotenoid	Terpene	100%

NZ_BPQU01000006 (original name was: NZ_BPQU01000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	terpene	50,461	71,339

NZ_BPQU01000013 (original name was: NZ_BPQU01000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	NAPAA	1	27,970

NZ_BPQU01000023 (original name was: NZ_BPQU01000023.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	terpene	9,911	35,011

NZ_BPQU01000028 (original name was: NZ_BPQU01000028.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	siderophore	12,251	27,000	ochrobactin	Other	57%

NZ_BPQU01000034 (original name was: NZ_BPQU01000034.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	redox-cofactor	1	20,437

NZ_BPQU01000040 (original name was: NZ_BPQU01000040.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	hserlactone	17,072	37,686

NZ_BPQU01000060 (original name was: NZ_BPQU01000060.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 60.1	T1PKS	1	14,176

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	hserlactone	180,513	201,136
Region 3.1	terpene	293,265	314,335	carotenoid	Terpene	100%
Region 6.1	terpene	50,461	71,339
Region 13.1	NAPAA	1	27,970
Region 23.1	terpene	9,911	35,011
Region 28.1	siderophore	12,251	27,000	ochrobactin	Other	57%
Region 34.1	redox-cofactor	1	20,437
Region 40.1	hserlactone	17,072	37,686
Region 60.1	T1PKS	1	14,176

No secondary metabolite regions were found in these records:: NZ_BPQU01000002 (original name was: NZ_BPQU01000002.1); NZ_BPQU01000004 (original name was: NZ_BPQU01000004.1); NZ_BPQU01000005 (original name was: NZ_BPQU01000005.1); NZ_BPQU01000007 (original name was: NZ_BPQU01000007.1); NZ_BPQU01000008 (original name was: NZ_BPQU01000008.1); NZ_BPQU01000009 (original name was: NZ_BPQU01000009.1); NZ_BPQU01000010 (original name was: NZ_BPQU01000010.1); NZ_BPQU01000011 (original name was: NZ_BPQU01000011.1); NZ_BPQU01000012 (original name was: NZ_BPQU01000012.1); NZ_BPQU01000014 (original name was: NZ_BPQU01000014.1); NZ_BPQU01000015 (original name was: NZ_BPQU01000015.1); NZ_BPQU01000016 (original name was: NZ_BPQU01000016.1); NZ_BPQU01000017 (original name was: NZ_BPQU01000017.1); NZ_BPQU01000018 (original name was: NZ_BPQU01000018.1); NZ_BPQU01000019 (original name was: NZ_BPQU01000019.1); NZ_BPQU01000020 (original name was: NZ_BPQU01000020.1); NZ_BPQU01000021 (original name was: NZ_BPQU01000021.1); NZ_BPQU01000022 (original name was: NZ_BPQU01000022.1); NZ_BPQU01000024 (original name was: NZ_BPQU01000024.1); NZ_BPQU01000025 (original name was: NZ_BPQU01000025.1); NZ_BPQU01000026 (original name was: NZ_BPQU01000026.1); NZ_BPQU01000027 (original name was: NZ_BPQU01000027.1); NZ_BPQU01000029 (original name was: NZ_BPQU01000029.1); NZ_BPQU01000030 (original name was: NZ_BPQU01000030.1); NZ_BPQU01000031 (original name was: NZ_BPQU01000031.1); NZ_BPQU01000032 (original name was: NZ_BPQU01000032.1); NZ_BPQU01000033 (original name was: NZ_BPQU01000033.1); NZ_BPQU01000035 (original name was: NZ_BPQU01000035.1); NZ_BPQU01000036 (original name was: NZ_BPQU01000036.1); NZ_BPQU01000037 (original name was: NZ_BPQU01000037.1); NZ_BPQU01000038 (original name was: NZ_BPQU01000038.1); NZ_BPQU01000039 (original name was: NZ_BPQU01000039.1); NZ_BPQU01000041 (original name was: NZ_BPQU01000041.1); NZ_BPQU01000042 (original name was: NZ_BPQU01000042.1); NZ_BPQU01000043 (original name was: NZ_BPQU01000043.1); NZ_BPQU01000044 (original name was: NZ_BPQU01000044.1); NZ_BPQU01000045 (original name was: NZ_BPQU01000045.1); NZ_BPQU01000046 (original name was: NZ_BPQU01000046.1); NZ_BPQU01000047 (original name was: NZ_BPQU01000047.1); NZ_BPQU01000048 (original name was: NZ_BPQU01000048.1); NZ_BPQU01000049 (original name was: NZ_BPQU01000049.1); NZ_BPQU01000050 (original name was: NZ_BPQU01000050.1); NZ_BPQU01000051 (original name was: NZ_BPQU01000051.1); NZ_BPQU01000052 (original name was: NZ_BPQU01000052.1); NZ_BPQU01000053 (original name was: NZ_BPQU01000053.1); NZ_BPQU01000054 (original name was: NZ_BPQU01000054.1); NZ_BPQU01000055 (original name was: NZ_BPQU01000055.1); NZ_BPQU01000056 (original name was: NZ_BPQU01000056.1); NZ_BPQU01000057 (original name was: NZ_BPQU01000057.1); NZ_BPQU01000058 (original name was: NZ_BPQU01000058.1); NZ_BPQU01000059 (original name was: NZ_BPQU01000059.1); NZ_BPQU01000061 (original name was: NZ_BPQU01000061.1); NZ_BPQU01000062 (original name was: NZ_BPQU01000062.1); NZ_BPQU01000063 (original name was: NZ_BPQU01000063.1); NZ_BPQU01000064 (original name was: NZ_BPQU01000064.1); NZ_BPQU01000065 (original name was: NZ_BPQU01000065.1); NZ_BPQU01000066 (original name was: NZ_BPQU01000066.1); NZ_BPQU01000067 (original name was: NZ_BPQU01000067.1); NZ_BPQU01000068 (original name was: NZ_BPQU01000068.1); NZ_BPQU01000069 (original name was: NZ_BPQU01000069.1); NZ_BPQU01000070 (original name was: NZ_BPQU01000070.1); NZ_BPQU01000071 (original name was: NZ_BPQU01000071.1); NZ_BPQU01000072 (original name was: NZ_BPQU01000072.1); NZ_BPQU01000073 (original name was: NZ_BPQU01000073.1); NZ_BPQU01000074 (original name was: NZ_BPQU01000074.1); NZ_BPQU01000075 (original name was: NZ_BPQU01000075.1); NZ_BPQU01000076 (original name was: NZ_BPQU01000076.1); NZ_BPQU01000077 (original name was: NZ_BPQU01000077.1); NZ_BPQU01000078 (original name was: NZ_BPQU01000078.1); NZ_BPQU01000079 (original name was: NZ_BPQU01000079.1); NZ_BPQU01000080 (original name was: NZ_BPQU01000080.1); NZ_BPQU01000081 (original name was: NZ_BPQU01000081.1); NZ_BPQU01000082 (original name was: NZ_BPQU01000082.1); NZ_BPQU01000083 (original name was: NZ_BPQU01000083.1); NZ_BPQU01000084 (original name was: NZ_BPQU01000084.1)

Compact view

c00001_NZ_BPQU.. - Region 1 - hserlactone

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Location: 180,513 - 201,136 nt. (total: 20,624 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001897.1	0.17	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000815.1	0.17	Alkaloid	loline	Epichloe uncinata
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000762.1	0.15	Saccharide	exopolysaccharide	Rhizobium leguminosarum bv. viciae
BGC0000504.1	0.15	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001514.1	0.15	Other	aristeromycin	Streptomyces citricolor
BGC0000698.1	0.14	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0001138.1	0.14	Other (Nucleoside)	a201a	Marinactinospora thermotolerans
BGC0001364.1	0.14	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001897.1	0.49	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000815.1	0.48	Alkaloid	loline	Epichloe uncinata
BGC0001551.1	0.47	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000762.1	0.46	Saccharide	exopolysaccharide	Rhizobium leguminosarum bv. viciae
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001514.1	0.45	Other	aristeromycin	Streptomyces citricolor
BGC0000698.1	0.44	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0001138.1	0.44	Other (Nucleoside)	a201a	Marinactinospora thermotolerans
BGC0001364.1	0.43	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00003_NZ_BPQU.. - Region 1 - terpene

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Location: 293,265 - 314,335 nt. (total: 21,071 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.51	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000650.1	0.26	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000656.1	0.25	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000648.1	0.24	Terpene	carotenoid	Myxococcus xanthus
BGC0000780.1	0.24	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000787.1	0.23	Saccharide	O-antigen	Escherichia coli
BGC0000788.1	0.23	Saccharide	O-antigen	Salmonella enterica subsp. salamae serovar Greenside
BGC0000799.1	0.23	Saccharide	colanic acid	Escherichia coli
BGC0000733.1	0.23	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000732.1	0.22	Saccharide	capsular polysaccharide	Raoultella planticola

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.79	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000650.1	0.59	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000656.1	0.58	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000648.1	0.57	Terpene	carotenoid	Myxococcus xanthus
BGC0000780.1	0.57	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000787.1	0.56	Saccharide	O-antigen	Escherichia coli
BGC0000788.1	0.56	Saccharide	O-antigen	Salmonella enterica subsp. salamae serovar Greenside
BGC0000799.1	0.56	Saccharide	colanic acid	Escherichia coli
BGC0000733.1	0.56	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0000732.1	0.55	Saccharide	capsular polysaccharide	Raoultella planticola

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00006_NZ_BPQU.. - Region 1 - terpene

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Location: 50,461 - 71,339 nt. (total: 20,879 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000633.1	0.20	Terpene	carotenoid	Streptomyces avermitilis
BGC0000386.1	0.19	NRP	malleobactin A, malleobactin B, malleobactin C, malleobactin D	Burkholderia thailandensis E264
BGC0001456.1	0.17	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000698.1	0.16	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0000703.1	0.15	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000294.1	0.15	NRP	acinetobactin	Acinetobacter baumannii
BGC0000706.1	0.14	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000387.1	0.13	NRP	mangotoxin	Pseudomonas syringae pv. syringae
BGC0001633.1	0.12	Other	ketomemicin B3, ketomemicin B4	Streptomyces mobaraensis NBRC 13819 = DSM 40847
BGC0000352.1	0.07	NRP	fimsbactin A	Acinetobacter sp. ADP1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000633.1	0.53	Terpene	carotenoid	Streptomyces avermitilis
BGC0000386.1	0.51	NRP	malleobactin A, malleobactin B, malleobactin C, malleobactin D	Burkholderia thailandensis E264
BGC0001456.1	0.48	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000698.1	0.46	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0000703.1	0.46	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000294.1	0.45	NRP	acinetobactin	Acinetobacter baumannii
BGC0000706.1	0.44	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000387.1	0.42	NRP	mangotoxin	Pseudomonas syringae pv. syringae
BGC0001633.1	0.41	Other	ketomemicin B3, ketomemicin B4	Streptomyces mobaraensis NBRC 13819 = DSM 40847
BGC0000352.1	0.27	NRP	fimsbactin A	Acinetobacter sp. ADP1

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00013_NZ_BPQU.. - Region 1 - NAPAA

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Location: 1 - 27,970 nt. (total: 27,970 nt) Show pHMM detection rules used

Region on contig edge.

NAPAA: (AMP-binding and PP-binding and TIGR02353)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000375.1	0.22	NRP	indigoidine	Streptomyces chromofuscus
BGC0000427.1	0.22	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001399.1	0.21	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001897.1	0.20	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001135.1	0.19	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001778.1	0.19	Other	showdomycin	Streptomyces showdoensis
BGC0001641.1	0.19	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001479.1	0.18	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001833.1	0.18	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001132.1	0.18	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000375.1	0.55	NRP	indigoidine	Streptomyces chromofuscus
BGC0000427.1	0.54	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001399.1	0.53	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001897.1	0.52	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001135.1	0.50	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001778.1	0.50	Other	showdomycin	Streptomyces showdoensis
BGC0001641.1	0.50	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001479.1	0.50	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001833.1	0.50	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001132.1	0.50	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061

Similar known gene clusters

No matches found.

Module view

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Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 27970:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg13_9

Search NORINE for peptide: strict or relaxed

AMP-binding (46..445): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DLedLgTVvK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 60% (weak)

c00023_NZ_BPQU.. - Region 1 - terpene

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Location: 9,911 - 35,011 nt. (total: 25,101 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.35	Terpene	carotenoid	Myxococcus xanthus
BGC0000647.1	0.34	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0001361.1	0.27	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0000646.1	0.25	Terpene	β-carotein	uncultured bacterium
BGC0000664.1	0.24	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000634.1	0.23	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0001594.1	0.20	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000645.1	0.18	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0001501.1	0.18	Alkaloid	ambiguine P	Fischerella sp. TAU
BGC0001664.1	0.18	Terpene	merosterol	Scytonema sp. PCC 10023

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.68	Terpene	carotenoid	Myxococcus xanthus
BGC0000647.1	0.67	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0001361.1	0.61	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0000646.1	0.58	Terpene	β-carotein	uncultured bacterium
BGC0000664.1	0.57	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000634.1	0.57	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0001594.1	0.53	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000645.1	0.50	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0001501.1	0.50	Alkaloid	ambiguine P	Fischerella sp. TAU
BGC0001664.1	0.49	Terpene	merosterol	Scytonema sp. PCC 10023

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00028_NZ_BPQU.. - Region 1 - siderophore

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Location: 12,251 - 27,000 nt. (total: 14,750 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001713.1	0.43	Other	ochrobactin	Ochrobactrum anthropi
BGC0001478.1	0.34	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0001499.1	0.31	Other	aerobactin	Pantoea ananatis
BGC0001572.1	0.30	Other	desferrioxamine E	Pantoea agglomerans
BGC0001531.1	0.26	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0000939.1	0.25	Other	aerobactin	Grimontia hollisae
BGC0001498.1	0.24	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0000941.1	0.24	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000940.1	0.23	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0001453.1	0.23	Other	desferrioxamine	Streptomyces argillaceus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001713.1	0.74	Other	ochrobactin	Ochrobactrum anthropi
BGC0001478.1	0.67	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0001499.1	0.65	Other	aerobactin	Pantoea ananatis
BGC0001572.1	0.63	Other	desferrioxamine E	Pantoea agglomerans
BGC0001531.1	0.59	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0000939.1	0.59	Other	aerobactin	Grimontia hollisae
BGC0001498.1	0.58	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0000941.1	0.57	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000940.1	0.56	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0001453.1	0.56	Other	desferrioxamine	Streptomyces argillaceus

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Detailed TIGRFAM domain annotation

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c00034_NZ_BPQU.. - Region 1 - redox-cofactor

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Location: 1 - 20,437 nt. (total: 20,437 nt) Show pHMM detection rules used

Region on contig edge.

redox-cofactor: (cds(PF04055 and (TIGR04085 or SPASM)) and (TIGR02111 or TIGR03966) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]))

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Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000928.1	0.12	Other	T3 toxin	Cylindrospermopsis raciborskii T3
BGC0000188.1	0.12	Alkaloid	saxitoxin, neosaxitoxin, decarbamoylsaxitoxin, gonyautoxin 3, gonyautoxin 2	Cylindrospermopsis raciborskii T3
BGC0002026.1	0.12	NRP	thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2	Jahnella sp. MSr9139
BGC0000043.1	0.11	Polyketide	curacin A	Moorea producens 19L
BGC0000700.1	0.09	Saccharide	istamycin	Streptomyces tenjimariensis
BGC0000842.1	0.09	Other (Non-NRP beta-lactam)	carbapenem MM4550	Streptomyces argenteolus
BGC0001100.1	0.08	NRP, Polyketide	lankacidin C	Streptomyces rochei
BGC0000310.1	0.07	NRP	bacitracin	Bacillus licheniformis
BGC0000545.1	0.07	RiPP	ruminococcin A	[Ruminococcus] gnavus E1
BGC0000260.1	0.07	Polyketide	prodigiosin	Hahella chejuensis KCTC 2396

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000928.1	0.39	Other	T3 toxin	Cylindrospermopsis raciborskii T3
BGC0000188.1	0.39	Alkaloid	saxitoxin, neosaxitoxin, decarbamoylsaxitoxin, gonyautoxin 3, gonyautoxin 2	Cylindrospermopsis raciborskii T3
BGC0002026.1	0.39	NRP	thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2	Jahnella sp. MSr9139
BGC0000043.1	0.37	Polyketide	curacin A	Moorea producens 19L
BGC0000700.1	0.34	Saccharide	istamycin	Streptomyces tenjimariensis
BGC0000842.1	0.34	Other (Non-NRP beta-lactam)	carbapenem MM4550	Streptomyces argenteolus
BGC0001100.1	0.31	NRP, Polyketide	lankacidin C	Streptomyces rochei
BGC0000310.1	0.29	NRP	bacitracin	Bacillus licheniformis
BGC0000545.1	0.28	RiPP	ruminococcin A	[Ruminococcus] gnavus E1
BGC0000260.1	0.28	Polyketide	prodigiosin	Hahella chejuensis KCTC 2396

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No matches found.

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Detailed TIGRFAM domain annotation

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c00040_NZ_BPQU.. - Region 1 - hserlactone

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Location: 17,072 - 37,686 nt. (total: 20,615 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

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KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001540.1	0.13	Other	CC-1065	Streptomyces zelensis
BGC0000466.1	0.13	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0001137.1	0.13	Alkaloid	marinacarboline A, marinacarboline B, marinacarboline C, marinacarboline D	Marinactinospora thermotolerans
BGC0001607.1	0.13	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0000343.1	0.12	NRP	enterobactin	Pseudomonas sp. J465
BGC0000934.1	0.12	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000349.1	0.12	NRP	erythrochelin	Saccharopolyspora erythraea NRRL 2338
BGC0000043.1	0.11	Polyketide	curacin A	Moorea producens 19L
BGC0001441.1	0.11	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0001650.1	0.09	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001540.1	0.42	Other	CC-1065	Streptomyces zelensis
BGC0000466.1	0.42	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0001137.1	0.41	Alkaloid	marinacarboline A, marinacarboline B, marinacarboline C, marinacarboline D	Marinactinospora thermotolerans
BGC0001607.1	0.41	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0000343.1	0.40	NRP	enterobactin	Pseudomonas sp. J465
BGC0000934.1	0.39	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000349.1	0.39	NRP	erythrochelin	Saccharopolyspora erythraea NRRL 2338
BGC0000043.1	0.38	Polyketide	curacin A	Moorea producens 19L
BGC0001441.1	0.37	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0001650.1	0.34	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes

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No matches found.

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Detailed TIGRFAM domain annotation

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c00060_NZ_BPQU.. - Region 1 - T1PKS

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Location: 1 - 14,176 nt. (total: 14,176 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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core biosynthetic genes

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NRPS/PKS modules

Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001909.1	0.31	Polyketide	strobilurin	Strobilurus tenacellus
BGC0001124.1	0.29	Polyketide	pyranonigrin E	Aspergillus niger ATCC 1015
BGC0001749.1	0.24	Polyketide	epipyriculol	Pyricularia oryzae 70-15
BGC0000056.1	0.23	Polyketide	esperamicin	Actinomadura verrucosospora
BGC0001067.1	0.23	Polyketide, Terpene	fumagillin, β-trans-bergamotene, fumagillol	Aspergillus fumigatus Af293
BGC0000046.1	0.22	Polyketide	depudecin	Alternaria brassicicola
BGC0001340.1	0.22	Polyketide	byssochlamic acid	Byssochlamys fulva
BGC0001697.1	0.21	Polyketide	neurosporin A	Neurospora crassa OR74A
BGC0001244.1	0.21	Polyketide	(-)-Mellein	Parastagonospora nodorum
BGC0001276.1	0.21	Polyketide	6-methylsalicyclic acid	Aspergillus terreus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001909.1	0.65	Polyketide	strobilurin	Strobilurus tenacellus
BGC0001124.1	0.62	Polyketide	pyranonigrin E	Aspergillus niger ATCC 1015
BGC0001749.1	0.57	Polyketide	epipyriculol	Pyricularia oryzae 70-15
BGC0000056.1	0.57	Polyketide	esperamicin	Actinomadura verrucosospora
BGC0001067.1	0.56	Polyketide, Terpene	fumagillin, β-trans-bergamotene, fumagillol	Aspergillus fumigatus Af293
BGC0000046.1	0.56	Polyketide	depudecin	Alternaria brassicicola
BGC0001340.1	0.55	Polyketide	byssochlamic acid	Byssochlamys fulva
BGC0001697.1	0.54	Polyketide	neurosporin A	Neurospora crassa OR74A
BGC0001244.1	0.54	Polyketide	(-)-Mellein	Parastagonospora nodorum
BGC0001276.1	0.54	Polyketide	6-methylsalicyclic acid	Aspergillus terreus

Similar known gene clusters

No matches found.

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 14176:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg60_4

PKS_AT (536..831): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; Propionyl-CoA: 66.7%; Methylmalonyl-CoA: 62.5%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 91.6
Methylmalonyl-CoA: 80.0
Methoxymalonyl-CoA: 70.0
Isobutyryl-CoA: 50.8
Ethylmalonyl-CoA: 43.5
Benzoyl-CoA: 42.1
inactive: 31.9
fatty_acid: 25.6
Propionyl-CoA: 24.9
trans-1,2-CPDA: 24.0
3-Methylbutyryl-CoA: 14.5
2-Methylbutyryl-CoA: 12.2
Acetyl-CoA: 9.4
CHC-CoA: 1.6