GCF_000147675.1_ASM14767v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_ADGQ01000064 (original name was: NZ_ADGQ01000064.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	RRE-containing	19,342	43,101

NZ_ADGQ01000060 (original name was: NZ_ADGQ01000060.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	ranthipeptide	138,438	158,581

NZ_ADGQ01000050 (original name was: NZ_ADGQ01000050.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	NRPS	15,432	57,636

NZ_ADGQ01000044 (original name was: NZ_ADGQ01000044.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	ranthipeptide	4,620	25,993

Region	Type	From	To	Similarity
Region 10.1	RRE-containing	19,342	43,101
Region 14.1	ranthipeptide	138,438	158,581
Region 21.1	NRPS	15,432	57,636
Region 25.1	ranthipeptide	4,620	25,993

No secondary metabolite regions were found in these records:: NZ_ADGQ01000074 (original name was: NZ_ADGQ01000074.1); NZ_ADGQ01000073 (original name was: NZ_ADGQ01000073.1); NZ_ADGQ01000072 (original name was: NZ_ADGQ01000072.1); NZ_ADGQ01000071 (original name was: NZ_ADGQ01000071.1); NZ_ADGQ01000070 (original name was: NZ_ADGQ01000070.1); NZ_ADGQ01000069 (original name was: NZ_ADGQ01000069.1); NZ_ADGQ01000068 (original name was: NZ_ADGQ01000068.1); NZ_ADGQ01000066 (original name was: NZ_ADGQ01000066.1); NZ_ADGQ01000065 (original name was: NZ_ADGQ01000065.1); NZ_ADGQ01000063 (original name was: NZ_ADGQ01000063.1); NZ_ADGQ01000062 (original name was: NZ_ADGQ01000062.1); NZ_ADGQ01000061 (original name was: NZ_ADGQ01000061.1); NZ_ADGQ01000059 (original name was: NZ_ADGQ01000059.1); NZ_ADGQ01000057 (original name was: NZ_ADGQ01000057.1); NZ_ADGQ01000056 (original name was: NZ_ADGQ01000056.1); NZ_ADGQ01000055 (original name was: NZ_ADGQ01000055.1); NZ_ADGQ01000054 (original name was: NZ_ADGQ01000054.1); NZ_ADGQ01000051 (original name was: NZ_ADGQ01000051.1); NZ_ADGQ01000048 (original name was: NZ_ADGQ01000048.1); NZ_ADGQ01000047 (original name was: NZ_ADGQ01000047.1); NZ_ADGQ01000046 (original name was: NZ_ADGQ01000046.1); NZ_ADGQ01000043 (original name was: NZ_ADGQ01000043.1); NZ_ADGQ01000041 (original name was: NZ_ADGQ01000041.1); NZ_ADGQ01000038 (original name was: NZ_ADGQ01000038.1); NZ_ADGQ01000035 (original name was: NZ_ADGQ01000035.1); NZ_ADGQ01000034 (original name was: NZ_ADGQ01000034.1); NZ_ADGQ01000032 (original name was: NZ_ADGQ01000032.1); NZ_ADGQ01000030 (original name was: NZ_ADGQ01000030.1); NZ_ADGQ01000029 (original name was: NZ_ADGQ01000029.1); NZ_ADGQ01000028 (original name was: NZ_ADGQ01000028.1); NZ_ADGQ01000027 (original name was: NZ_ADGQ01000027.1); NZ_ADGQ01000026 (original name was: NZ_ADGQ01000026.1); NZ_ADGQ01000025 (original name was: NZ_ADGQ01000025.1); NZ_ADGQ01000024 (original name was: NZ_ADGQ01000024.1); NZ_ADGQ01000022 (original name was: NZ_ADGQ01000022.1); NZ_ADGQ01000019 (original name was: NZ_ADGQ01000019.1); NZ_ADGQ01000018 (original name was: NZ_ADGQ01000018.1); NZ_ADGQ01000016 (original name was: NZ_ADGQ01000016.1); NZ_ADGQ01000015 (original name was: NZ_ADGQ01000015.1); NZ_ADGQ01000014 (original name was: NZ_ADGQ01000014.1); NZ_ADGQ01000013 (original name was: NZ_ADGQ01000013.1); NZ_ADGQ01000011 (original name was: NZ_ADGQ01000011.1); NZ_ADGQ01000010 (original name was: NZ_ADGQ01000010.1); NZ_ADGQ01000009 (original name was: NZ_ADGQ01000009.1); NZ_ADGQ01000008 (original name was: NZ_ADGQ01000008.1); NZ_ADGQ01000004 (original name was: NZ_ADGQ01000004.1); NZ_ADGQ01000002 (original name was: NZ_ADGQ01000002.1); NZ_ADGQ01000001 (original name was: NZ_ADGQ01000001.1)

Compact view

c00010_NZ_ADGQ.. - Region 1 - RRE-containing

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Location: 19,342 - 43,101 nt. (total: 23,760 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001779.1	0.26	RiPP	siamycin	Streptomyces nodosus
BGC0001645.1	0.21	RiPP	lagmysin	Streptomyces sp. NRRL S-118
BGC0000599.1	0.20	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0001549.1	0.19	RiPP	citrulassin B	Streptomyces aurantiacus JA 4570
BGC0001552.1	0.19	RiPP	citrulassin F	Streptomyces avermitilis MA-4680 = NBRC 14893
BGC0000600.1	0.19	RiPP	thurincin H	Bacillus thuringiensis
BGC0000602.1	0.19	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001496.1	0.19	RiPP	actinokineosin	Actinokineospora spheciospongiae
BGC0000616.1	0.18	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000243.1	0.18	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001779.1	0.59	RiPP	siamycin	Streptomyces nodosus
BGC0001645.1	0.53	RiPP	lagmysin	Streptomyces sp. NRRL S-118
BGC0000599.1	0.52	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0001549.1	0.52	RiPP	citrulassin B	Streptomyces aurantiacus JA 4570
BGC0001552.1	0.52	RiPP	citrulassin F	Streptomyces avermitilis MA-4680 = NBRC 14893
BGC0000600.1	0.51	RiPP	thurincin H	Bacillus thuringiensis
BGC0000602.1	0.51	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001496.1	0.51	RiPP	actinokineosin	Actinokineospora spheciospongiae
BGC0000616.1	0.50	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000243.1	0.49	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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c00014_NZ_ADGQ.. - Region 1 - ranthipeptide

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Location: 138,438 - 158,581 nt. (total: 20,144 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000792.1	0.17	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001067.1	0.05	Polyketide, Terpene	fumagillin, β-trans-bergamotene, fumagillol	Aspergillus fumigatus Af293
BGC0000695.1	0.04	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0000689.1	0.04	Saccharide	2-deoxystreptamine	Micromonospora echinospora
BGC0001902.1	0.03	NRP, Polyketide	bengamide	Myxococcus virescens
BGC0001603.1	0.03	Saccharide	gentamicin	Micromonospora echinospora
BGC0000714.1	0.03	Saccharide	sisomicin	Micromonospora inyonensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000792.1	0.48	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001067.1	0.23	Polyketide, Terpene	fumagillin, β-trans-bergamotene, fumagillol	Aspergillus fumigatus Af293
BGC0000695.1	0.18	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0000689.1	0.17	Saccharide	2-deoxystreptamine	Micromonospora echinospora
BGC0001902.1	0.16	NRP, Polyketide	bengamide	Myxococcus virescens
BGC0001603.1	0.16	Saccharide	gentamicin	Micromonospora echinospora
BGC0000714.1	0.16	Saccharide	sisomicin	Micromonospora inyonensis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00021_NZ_ADGQ.. - Region 1 - NRPS

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Location: 15,432 - 57,636 nt. (total: 42,205 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001739.1	0.24	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000885.1	0.19	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0001545.1	0.18	NRP	chrysogine	Fusarium graminearum PH-1
BGC0001641.1	0.18	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001128.1	0.18	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001399.1	0.17	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001844.1	0.17	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001825.1	0.17	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001132.1	0.17	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001527.1	0.17	Other	basidioferrin	Gelatoporia subvermispora

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001739.1	0.58	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000885.1	0.51	Other	4-hydroxy-3-nitrosobenzamide	Streptomyces murayamaensis
BGC0001545.1	0.50	NRP	chrysogine	Fusarium graminearum PH-1
BGC0001641.1	0.49	NRP	kolossin	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001128.1	0.49	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001399.1	0.49	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0001844.1	0.49	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001825.1	0.49	NRP	xenematide	Xenorhabdus nematophila AN6/1
BGC0001132.1	0.49	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001527.1	0.48	Other	basidioferrin	Gelatoporia subvermispora

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00025_NZ_ADGQ.. - Region 1 - ranthipeptide

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Location: 4,620 - 25,993 nt. (total: 21,374 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.18	Other	nucleocidin	Streptomyces calvus
BGC0001607.1	0.14	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0001887.1	0.14	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0000466.1	0.14	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0001540.1	0.14	Other	CC-1065	Streptomyces zelensis
BGC0001591.1	0.10	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.10	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0000027.1	0.09	Polyketide	ankaflavin, monascin, rubropunctatine, monascorubrin	Monascus pilosus
BGC0001155.1	0.08	RiPP	GE2270	Planobispora rosea
BGC0001943.1	0.08	NRP	vioprolides A, vioprolides B, vioprolides C, vioprolides D	Cystobacter sp.

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.49	Other	nucleocidin	Streptomyces calvus
BGC0001607.1	0.44	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0001887.1	0.43	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0000466.1	0.43	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0001540.1	0.43	Other	CC-1065	Streptomyces zelensis
BGC0001591.1	0.36	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.36	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0000027.1	0.34	Polyketide	ankaflavin, monascin, rubropunctatine, monascorubrin	Monascus pilosus
BGC0001155.1	0.32	RiPP	GE2270	Planobispora rosea
BGC0001943.1	0.31	NRP	vioprolides A, vioprolides B, vioprolides C, vioprolides D	Cystobacter sp.

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names